RNA–Protein interactions for RNA: ENST00000541513.2

DDB1-219, Transcript of damage specific DNA binding protein 1, humanhuman

TSL 4

Gene DDB1, Length 958 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDB1-219ENST00000541513 FLGP20930 4061 aaPredicted RBP2.37□□□□□ -2.03
DDB1-219ENST00000541513 MUC2Q02817 5179 aa2.37□□□□□ -2.03
DDB1-219ENST00000541513 KRTAP10-10P60014 251 aa2.35□□□□□ -2.03
DDB1-219ENST00000541513 KRTAP12-1P59990 96 aa2.33□□□□□ -2.04
DDB1-219ENST00000541513 KRTAP6-3Q3LI67 103 aa2.33□□□□□ -2.04
DDB1-219ENST00000541513 H1FX-AS1Q4G0G2 97 aa2.33□□□□□ -2.04
DDB1-219ENST00000541513 KRTAP19-2Q3LHN2 52 aa2.32□□□□□ -2.04
DDB1-219ENST00000541513 C10orf95Q9H7T3 257 aa2.32□□□□□ -2.04
DDB1-219ENST00000541513 MT1HP80294 61 aa2.27□□□□□ -2.05
DDB1-219ENST00000541513 M0R2T5 61 aa2.21□□□□□ -2.06
DDB1-219ENST00000541513 KRTAP5-8O75690 187 aa2.19□□□□□ -2.06
DDB1-219ENST00000541513 LCE3DQ9BYE3 92 aa2.19□□□□□ -2.06
DDB1-219ENST00000541513 S4R3F8 94 aa2.17□□□□□ -2.06
DDB1-219ENST00000541513 KRTAP12-4P60329 112 aa2.15□□□□□ -2.07
DDB1-219ENST00000541513 MT2AP02795 61 aa2.14□□□□□ -2.07
DDB1-219ENST00000541513 LCE3AQ5TA76 89 aa2.13□□□□□ -2.07
DDB1-219ENST00000541513 MT1FP04733 61 aa2.12□□□□□ -2.07
DDB1-219ENST00000541513 FSIP2Q5CZC0 6907 aa2.05□□□□□ -2.08
DDB1-219ENST00000541513 SPRR2GQ9BYE4 73 aa2.04□□□□□ -2.08
DDB1-219ENST00000541513 USH2AO75445 5202 aa2.04□□□□□ -2.08
DDB1-219ENST00000541513 SSPOA2VEC9 5147 aa2.02□□□□□ -2.09
DDB1-219ENST00000541513 KRTAP19-8Q3LI54 63 aa2.02□□□□□ -2.09
DDB1-219ENST00000541513 KRTAP5-5Q701N2 237 aaPredicted RBP2.02□□□□□ -2.09
DDB1-219ENST00000541513 CRCT1Q9UGL9 99 aa2.02□□□□□ -2.09
DDB1-219ENST00000541513 MT1BP07438 61 aa1.99□□□□□ -2.09
DDB1-219ENST00000541513 KRTAP19-6Q3LI70 58 aa1.99□□□□□ -2.09
DDB1-219ENST00000541513 M0QZ58 72 aa1.98□□□□□ -2.09
DDB1-219ENST00000541513 A0A0D9SG42 100 aa1.96□□□□□ -2.1
DDB1-219ENST00000541513 KRTAP12-3P60328 96 aa1.94□□□□□ -2.1
DDB1-219ENST00000541513 FCGBPQ9Y6R7 5405 aaPredicted RBP1.93□□□□□ -2.1
DDB1-219ENST00000541513 LCE1CQ5T751 118 aa1.9□□□□□ -2.11
DDB1-219ENST00000541513 LCE1BQ5T7P3 118 aa1.9□□□□□ -2.11
DDB1-219ENST00000541513 MT1XP80297 61 aa1.89□□□□□ -2.11
DDB1-219ENST00000541513 SYNE2Q8WXH0 6885 aaKnown RBP1.86□□□□□ -2.11
DDB1-219ENST00000541513 HMCN1Q96RW7 5635 aa1.82□□□□□ -2.12
DDB1-219ENST00000541513 MACF1Q9UPN3 7388 aaKnown RBP1.82□□□□□ -2.12
DDB1-219ENST00000541513 NEBP20929 6669 aa1.79□□□□□ -2.12
DDB1-219ENST00000541513 KRTAP8-1Q8IUC2 63 aa1.76□□□□□ -2.13
DDB1-219ENST00000541513 KMT2DO14686 5537 aa1.75□□□□□ -2.13
DDB1-219ENST00000541513 TNP1P09430 55 aa1.73□□□□□ -2.13
DDB1-219ENST00000541513 SPRR2FQ96RM1 72 aa1.73□□□□□ -2.13
DDB1-219ENST00000541513 MUC19Q7Z5P9 8384 aa1.71□□□□□ -2.14
DDB1-219ENST00000541513 MUC12Q9UKN1 5478 aa1.7□□□□□ -2.14
DDB1-219ENST00000541513 KRTAP19-7Q3SYF9 63 aa1.69□□□□□ -2.14
DDB1-219ENST00000541513 GPR98Q8WXG9 6306 aa1.67□□□□□ -2.14
DDB1-219ENST00000541513 MT1EP04732 61 aa1.67□□□□□ -2.14
DDB1-219ENST00000541513 SPRR2EP22531 72 aa1.67□□□□□ -2.14
DDB1-219ENST00000541513 SPRR2BP35325 72 aa1.67□□□□□ -2.14
DDB1-219ENST00000541513 SPRR2AP35326 72 aa1.67□□□□□ -2.14
DDB1-219ENST00000541513 KRTAP19-5Q3LI72 72 aa1.67□□□□□ -2.14
DDB1-219ENST00000541513 MDN1Q9NU22 5596 aa1.67□□□□□ -2.14
DDB1-219ENST00000541513 KRTAP19-3Q7Z4W3 81 aa1.64□□□□□ -2.15
DDB1-219ENST00000541513 SPRR2DP22532 72 aa1.62□□□□□ -2.15
DDB1-219ENST00000541513 MT1LQ93083 61 aa1.62□□□□□ -2.15
DDB1-219ENST00000541513 MT1GP13640 62 aa1.61□□□□□ -2.15
DDB1-219ENST00000541513 KRTAP20-1Q3LI63 56 aa1.61□□□□□ -2.15
DDB1-219ENST00000541513 KRTAP2-3P0C7H8 128 aa1.6□□□□□ -2.15
DDB1-219ENST00000541513 KRTAP2-4Q9BYR9 128 aa1.6□□□□□ -2.15
DDB1-219ENST00000541513 KRTAP5-7Q6L8G8 165 aa1.58□□□□□ -2.16
DDB1-219ENST00000541513 MT1MQ8N339 61 aa1.58□□□□□ -2.16
DDB1-219ENST00000541513 KRTAP2-1Q9BYU5 128 aa1.58□□□□□ -2.16
DDB1-219ENST00000541513 KRTAP21-2Q3LI59 83 aa1.44□□□□□ -2.18
DDB1-219ENST00000541513 DSTQ03001 7570 aaKnown RBP1.43□□□□□ -2.18
DDB1-219ENST00000541513 AHNAK2Q8IVF2 5795 aa1.4□□□□□ -2.19
DDB1-219ENST00000541513 MT1AP04731 61 aa1.39□□□□□ -2.19
DDB1-219ENST00000541513 MT4P47944 62 aa1.39□□□□□ -2.19
DDB1-219ENST00000541513 PRM1P04553 51 aa1.37□□□□□ -2.19
DDB1-219ENST00000541513 KRTAP20-2Q3LI61 65 aa1.36□□□□□ -2.19
DDB1-219ENST00000541513 KRTAP6-1Q3LI64 71 aa1.36□□□□□ -2.19
DDB1-219ENST00000541513 SYNE1Q8NF91 8797 aaKnown RBP1.35□□□□□ -2.19
DDB1-219ENST00000541513 KRTAP5-10Q6L8G5 202 aa1.32□□□□□ -2.2
DDB1-219ENST00000541513 AHNAKQ09666 5890 aaKnown RBP1.28□□□□□ -2.21
DDB1-219ENST00000541513 KRTAP6-2Q3LI66 62 aa1.27□□□□□ -2.21
DDB1-219ENST00000541513 MUC5BQ9HC84 5762 aaPredicted RBP1.24□□□□□ -2.21
DDB1-219ENST00000541513 MUC5ACP98088 5654 aa1.18□□□□□ -2.22
DDB1-219ENST00000541513 KRTAP21-1Q3LI58 79 aa1.05□□□□□ -2.24
DDB1-219ENST00000541513 PHGR1C9JFL3 82 aa0.8□□□□□ -2.28
DDB1-219ENST00000541513 MUC16Q8WXI7 14507 aa0.64□□□□□ -2.31
Retrieved 78 of 20,778 RNA–protein pairs in 87.8 ms