RNA–Protein interactions for RNA: ENST00000540999.5

TCF4-207, Transcript of transcription factor 4, humanhuman

TSL 2 BASIC

Gene TCF4, Length 2,572 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TCF4-207ENST00000540999 KRTAP4-8A0A0G2JLE6 195 aa3.3□□□□□ -1.88
TCF4-207ENST00000540999 LCE1DQ5T752 114 aa3.29□□□□□ -1.88
TCF4-207ENST00000540999 LCE1EQ5T753 118 aa3.29□□□□□ -1.88
TCF4-207ENST00000540999 LCE1FQ5T754 118 aa3.29□□□□□ -1.88
TCF4-207ENST00000540999 LCE3AQ5TA76 89 aa3.27□□□□□ -1.89
TCF4-207ENST00000540999 KRTAP10-12P60413 245 aa3.23□□□□□ -1.89
TCF4-207ENST00000540999 KRTAP19-6Q3LI70 58 aa3.21□□□□□ -1.9
TCF4-207ENST00000540999 FCGBPQ9Y6R7 5405 aaPredicted RBP3.2□□□□□ -1.9
TCF4-207ENST00000540999 KRTAP12-4P60329 112 aa3.15□□□□□ -1.9
TCF4-207ENST00000540999 KRTAP4-7Q9BYR0 210 aa3.15□□□□□ -1.9
TCF4-207ENST00000540999 KRTAP4-9Q9BYQ8 210 aa3.15□□□□□ -1.91
TCF4-207ENST00000540999 KRTAP8-1Q8IUC2 63 aa3.14□□□□□ -1.91
TCF4-207ENST00000540999 KRTAP5-3Q6L8H2 238 aa3.12□□□□□ -1.91
TCF4-207ENST00000540999 KRTAP4-11Q9BYQ6 195 aa3.11□□□□□ -1.91
TCF4-207ENST00000540999 KRTAP19-5Q3LI72 72 aa3.11□□□□□ -1.91
TCF4-207ENST00000540999 KRTAP12-3P60328 96 aa3.1□□□□□ -1.91
TCF4-207ENST00000540999 MACF1Q9UPN3 7388 aaKnown RBP3.07□□□□□ -1.92
TCF4-207ENST00000540999 KRTAP19-7Q3SYF9 63 aa3.06□□□□□ -1.92
TCF4-207ENST00000540999 LCE3CQ5T5A8 94 aa3.06□□□□□ -1.92
TCF4-207ENST00000540999 CRCT1Q9UGL9 99 aa3.06□□□□□ -1.92
TCF4-207ENST00000540999 KRTAP2-3P0C7H8 128 aa3.05□□□□□ -1.92
TCF4-207ENST00000540999 KRTAP4-2Q9BYR5 136 aa3.05□□□□□ -1.92
TCF4-207ENST00000540999 KRTAP2-4Q9BYR9 128 aa3.05□□□□□ -1.92
TCF4-207ENST00000540999 KRTAP2-1Q9BYU5 128 aa3.05□□□□□ -1.92
TCF4-207ENST00000540999 MUC12Q9UKN1 5478 aa3.02□□□□□ -1.93
TCF4-207ENST00000540999 SYNE2Q8WXH0 6885 aaKnown RBP3.02□□□□□ -1.93
TCF4-207ENST00000540999 MT1EP04732 61 aa2.98□□□□□ -1.93
TCF4-207ENST00000540999 MT1LQ93083 61 aa2.93□□□□□ -1.94
TCF4-207ENST00000540999 SPRR2FQ96RM1 72 aa2.92□□□□□ -1.94
TCF4-207ENST00000540999 MDN1Q9NU22 5596 aa2.88□□□□□ -1.95
TCF4-207ENST00000540999 LCE3EQ5T5B0 92 aa2.86□□□□□ -1.95
TCF4-207ENST00000540999 KRTAP4-3Q9BYR4 195 aa2.85□□□□□ -1.95
TCF4-207ENST00000540999 DSTQ03001 7570 aaKnown RBP2.84□□□□□ -1.95
TCF4-207ENST00000540999 MT3P25713 68 aa2.84□□□□□ -1.96
TCF4-207ENST00000540999 KRTAP19-3Q7Z4W3 81 aa2.84□□□□□ -1.96
TCF4-207ENST00000540999 KRTAP9-6A8MVA2 160 aa2.83□□□□□ -1.96
TCF4-207ENST00000540999 KRTAP5-9P26371 169 aa2.81□□□□□ -1.96
TCF4-207ENST00000540999 MT1MQ8N339 61 aa2.8□□□□□ -1.96
TCF4-207ENST00000540999 MT1GP13640 62 aa2.79□□□□□ -1.96
TCF4-207ENST00000540999 SPRR2EP22531 72 aa2.74□□□□□ -1.97
TCF4-207ENST00000540999 SPRR2BP35325 72 aa2.74□□□□□ -1.97
TCF4-207ENST00000540999 SPRR2AP35326 72 aa2.74□□□□□ -1.97
TCF4-207ENST00000540999 LCE3DQ9BYE3 92 aa2.73□□□□□ -1.97
TCF4-207ENST00000540999 PRM1P04553 51 aa2.72□□□□□ -1.97
TCF4-207ENST00000540999 HMCN1Q96RW7 5635 aa2.71□□□□□ -1.98
TCF4-207ENST00000540999 SPRR2DP22532 72 aa2.62□□□□□ -1.99
TCF4-207ENST00000540999 NEBP20929 6669 aa2.59□□□□□ -1.99
TCF4-207ENST00000540999 SYNE1Q8NF91 8797 aaKnown RBP2.52□□□□□ -2.01
TCF4-207ENST00000540999 KRTAP5-5Q701N2 237 aaPredicted RBP2.51□□□□□ -2.01
TCF4-207ENST00000540999 KRTAP6-1Q3LI64 71 aa2.5□□□□□ -2.01
TCF4-207ENST00000540999 MT1AP04731 61 aa2.45□□□□□ -2.02
TCF4-207ENST00000540999 GPR98Q8WXG9 6306 aa2.4□□□□□ -2.02
TCF4-207ENST00000540999 OBSCNQ5VST9 7968 aa2.36□□□□□ -2.03
TCF4-207ENST00000540999 KRTAP5-4Q6L8H1 288 aa2.35□□□□□ -2.03
TCF4-207ENST00000540999 MT4P47944 62 aa2.34□□□□□ -2.04
TCF4-207ENST00000540999 KRTAP20-1Q3LI63 56 aa2.33□□□□□ -2.04
TCF4-207ENST00000540999 KRTAP6-2Q3LI66 62 aa2.29□□□□□ -2.04
TCF4-207ENST00000540999 MUC5BQ9HC84 5762 aaPredicted RBP2.24□□□□□ -2.05
TCF4-207ENST00000540999 KRTAP20-2Q3LI61 65 aa2.23□□□□□ -2.05
TCF4-207ENST00000540999 MUC19Q7Z5P9 8384 aa2.19□□□□□ -2.06
TCF4-207ENST00000540999 KRTAP5-6Q6L8G9 129 aaPredicted RBP2.17□□□□□ -2.06
TCF4-207ENST00000540999 LCE1CQ5T751 118 aa2.15□□□□□ -2.06
TCF4-207ENST00000540999 LCE1BQ5T7P3 118 aa2.15□□□□□ -2.06
TCF4-207ENST00000540999 KRTAP5-11Q6L8G4 156 aa2.14□□□□□ -2.07
TCF4-207ENST00000540999 KRTAP5-2Q701N4 177 aa2.14□□□□□ -2.07
TCF4-207ENST00000540999 KRTAP4-4Q9BYR3 166 aa2□□□□□ -2.09
TCF4-207ENST00000540999 AHNAKQ09666 5890 aaKnown RBP1.95□□□□□ -2.1
TCF4-207ENST00000540999 AHNAK2Q8IVF2 5795 aa1.95□□□□□ -2.1
TCF4-207ENST00000540999 KRTAP5-1Q6L8H4 278 aa1.88□□□□□ -2.11
TCF4-207ENST00000540999 MUC5ACP98088 5654 aa1.87□□□□□ -2.11
TCF4-207ENST00000540999 KRTAP5-8O75690 187 aa1.85□□□□□ -2.11
TCF4-207ENST00000540999 KRTAP21-1Q3LI58 79 aa1.84□□□□□ -2.12
TCF4-207ENST00000540999 KRTAP5-10Q6L8G5 202 aa1.82□□□□□ -2.12
TCF4-207ENST00000540999 KRTAP5-7Q6L8G8 165 aa1.75□□□□□ -2.13
TCF4-207ENST00000540999 KRTAP21-2Q3LI59 83 aa1.62□□□□□ -2.15
TCF4-207ENST00000540999 PHGR1C9JFL3 82 aa1.35□□□□□ -2.19
TCF4-207ENST00000540999 MUC16Q8WXI7 14507 aa0.93□□□□□ -2.26
Retrieved 77 of 20,778 RNA–protein pairs in 635.9 ms