RNA–Protein interactions for RNA: ENST00000540865.5

SNHG1-214, Transcript of small nucleolar RNA host gene 1, humanhuman

TSL 5

Gene SNHG1, Length 784 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNHG1-214ENST00000540865 MUC19Q7Z5P9 8384 aa1.58□□□□□ -2.16
SNHG1-214ENST00000540865 ATOX1O00244 68 aa1.57□□□□□ -2.16
SNHG1-214ENST00000540865 KRTAP12-4P60329 112 aa1.57□□□□□ -2.16
SNHG1-214ENST00000540865 LUZP6Q538Z0 58 aa1.56□□□□□ -2.16
SNHG1-214ENST00000540865 SPCS1Q9Y6A9 102 aa1.56□□□□□ -2.16
SNHG1-214ENST00000540865 A0A0D9SG42 100 aa1.55□□□□□ -2.16
SNHG1-214ENST00000540865 H0Y9P7 68 aa1.54□□□□□ -2.16
SNHG1-214ENST00000540865 M0R143 59 aa1.54□□□□□ -2.16
SNHG1-214ENST00000540865 UQCRQO14949 82 aa1.54□□□□□ -2.16
SNHG1-214ENST00000540865 PYY3Q5JQD4 70 aa1.54□□□□□ -2.16
SNHG1-214ENST00000540865 V9GYY9 64 aa1.53□□□□□ -2.16
SNHG1-214ENST00000540865 FAM240AA0A1B0GVK7 77 aa1.52□□□□□ -2.17
SNHG1-214ENST00000540865 SPINT4Q6UDR6 99 aa1.52□□□□□ -2.17
SNHG1-214ENST00000540865 TAX1BP3O14907 124 aa1.51□□□□□ -2.17
SNHG1-214ENST00000540865 PRO0628Q9UI54 55 aa1.5□□□□□ -2.17
SNHG1-214ENST00000540865 DMAC1Q96GE9 116 aa1.49□□□□□ -2.17
SNHG1-214ENST00000540865 LINC00208Q96KT6 92 aa1.49□□□□□ -2.17
SNHG1-214ENST00000540865 TRAV7A0A075B6U4 112 aa1.47□□□□□ -2.17
SNHG1-214ENST00000540865 C10orf95Q9H7T3 257 aa1.47□□□□□ -2.17
SNHG1-214ENST00000540865 MP68P56378 58 aa1.46□□□□□ -2.18
SNHG1-214ENST00000540865 KRTAP13-4Q3LI77 160 aa1.46□□□□□ -2.18
SNHG1-214ENST00000540865 SPTSSBQ8NFR3 76 aa1.46□□□□□ -2.18
SNHG1-214ENST00000540865 HIST1H4AP62805 103 aaKnown RBP1.43□□□□□ -2.18
SNHG1-214ENST00000540865 H3BPC8 53 aa1.42□□□□□ -2.18
SNHG1-214ENST00000540865 ACYP2P14621 99 aa1.41□□□□□ -2.18
SNHG1-214ENST00000540865 ATP5EP2Q5VTU8 51 aa1.41□□□□□ -2.18
SNHG1-214ENST00000540865 K7ERS5 55 aa1.39□□□□□ -2.19
SNHG1-214ENST00000540865 KRTAP12-3P60328 96 aa1.39□□□□□ -2.19
SNHG1-214ENST00000540865 KRTAP21-2Q3LI59 83 aa1.39□□□□□ -2.19
SNHG1-214ENST00000540865 ANAPC13Q9BS18 74 aa1.39□□□□□ -2.19
SNHG1-214ENST00000540865 CHKB-CPT1BH3BT56 60 aa1.38□□□□□ -2.19
SNHG1-214ENST00000540865 TNP1P09430 55 aa1.38□□□□□ -2.19
SNHG1-214ENST00000540865 KRTAP25-1Q3LHN0 102 aa1.37□□□□□ -2.19
SNHG1-214ENST00000540865 KRTAP12-1P59990 96 aa1.36□□□□□ -2.19
SNHG1-214ENST00000540865 MT1AP04731 61 aa1.35□□□□□ -2.19
SNHG1-214ENST00000540865 KRTAP6-1Q3LI64 71 aa1.35□□□□□ -2.19
SNHG1-214ENST00000540865 ETDBQ3ZM63 59 aa1.35□□□□□ -2.19
SNHG1-214ENST00000540865 A0A1B0GU33 70 aa1.34□□□□□ -2.19
SNHG1-214ENST00000540865 F8W1H4 67 aa1.34□□□□□ -2.19
SNHG1-214ENST00000540865 KRTAP6-2Q3LI66 62 aa1.34□□□□□ -2.19
SNHG1-214ENST00000540865 A6NED7 52 aa1.32□□□□□ -2.2
SNHG1-214ENST00000540865 SMIM6P0DI80 62 aa1.32□□□□□ -2.2
SNHG1-214ENST00000540865 SPATA8Q6RVD6 105 aa1.32□□□□□ -2.2
SNHG1-214ENST00000540865 LINC00643Q86TS7 51 aa1.32□□□□□ -2.2
SNHG1-214ENST00000540865 SCGB1A1P11684 91 aa1.31□□□□□ -2.2
SNHG1-214ENST00000540865 COL5A1-AS1Q5SY13 56 aa1.3□□□□□ -2.2
SNHG1-214ENST00000540865 GTF2H5Q6ZYL4 71 aa1.3□□□□□ -2.2
SNHG1-214ENST00000540865 SERP1Q9Y6X1 66 aa1.29□□□□□ -2.2
SNHG1-214ENST00000540865 COA5Q86WW8 74 aa1.2□□□□□ -2.22
SNHG1-214ENST00000540865 SMIM20Q8N5G0 67 aa1.2□□□□□ -2.22
SNHG1-214ENST00000540865 SERP2Q8N6R1 65 aa1.18□□□□□ -2.22
SNHG1-214ENST00000540865 SNURFQ9Y675 71 aa1.18□□□□□ -2.22
SNHG1-214ENST00000540865 A0A1B0GU69 56 aa1.15□□□□□ -2.23
SNHG1-214ENST00000540865 LOC105371267A0A1B0GV96 52 aa1.11□□□□□ -2.23
SNHG1-214ENST00000540865 H7BZZ5 65 aa1.11□□□□□ -2.23
SNHG1-214ENST00000540865 PRR15LQ9BU68 103 aa1.1□□□□□ -2.23
SNHG1-214ENST00000540865 PHGR1C9JFL3 82 aa1.09□□□□□ -2.23
SNHG1-214ENST00000540865 J3QR89 54 aa1.09□□□□□ -2.23
SNHG1-214ENST00000540865 UQCR11O14957 56 aa1.01□□□□□ -2.25
SNHG1-214ENST00000540865 TMEM258P61165 79 aa1.01□□□□□ -2.25
SNHG1-214ENST00000540865 RPS28P62857 69 aaKnown RBP1□□□□□ -2.25
SNHG1-214ENST00000540865 KTN1-AS1Q86SY8 53 aa1□□□□□ -2.25
SNHG1-214ENST00000540865 PMAIP1Q13794 54 aa0.99□□□□□ -2.25
SNHG1-214ENST00000540865 A0A1B0GV90 55 aa0.98□□□□□ -2.25
SNHG1-214ENST00000540865 LINC01558Q9Y6Z2 57 aa0.98□□□□□ -2.25
SNHG1-214ENST00000540865 COX7CP15954 63 aa0.95□□□□□ -2.26
SNHG1-214ENST00000540865 MIR22HGQ0VDD5 57 aa0.95□□□□□ -2.26
SNHG1-214ENST00000540865 Q1T7F1 81 aa0.94□□□□□ -2.26
SNHG1-214ENST00000540865 K7ERU9 68 aa0.92□□□□□ -2.26
SNHG1-214ENST00000540865 CDC42SE1Q9NRR8 79 aa0.9□□□□□ -2.27
SNHG1-214ENST00000540865 ROMO1P60602 79 aa0.87□□□□□ -2.27
SNHG1-214ENST00000540865 ATP5EP56381 51 aaPredicted RBP0.85□□□□□ -2.27
SNHG1-214ENST00000540865 KRTAP21-1Q3LI58 79 aa0.85□□□□□ -2.27
SNHG1-214ENST00000540865 CCDC179H3BU77 68 aa0.75□□□□□ -2.29
SNHG1-214ENST00000540865 INE1O15225 51 aa0.71□□□□□ -2.3
SNHG1-214ENST00000540865 MUC16Q8WXI7 14507 aa0.63□□□□□ -2.31
SNHG1-214ENST00000540865 PRM1P04553 51 aa0.42□□□□□ -2.34
SNHG1-214ENST00000540865 BRK1Q8WUW1 75 aa0.42□□□□□ -2.34
Retrieved 78 of 20,778 RNA–protein pairs in 12.1 ms