RNA–Protein interactions for RNA: ENST00000540781.5

RAP1B-222, Transcript of RAP1B, member of RAS oncogene family, human

TSL 4

Gene RAP1B, Length 571 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
RAP1B-222	ENST00000540781	MT1M	Q8N339	61 aa		7.06	□□□□□ -1.28
RAP1B-222	ENST00000540781	MIR22HG	Q0VDD5	57 aa		7	□□□□□ -1.29
RAP1B-222	ENST00000540781	KRTAP4-9	Q9BYQ8	210 aa		6.96	□□□□□ -1.3
RAP1B-222	ENST00000540781		V9GYY9	64 aa		6.91	□□□□□ -1.3
RAP1B-222	ENST00000540781	KRTAP12-3	P60328	96 aa		6.89	□□□□□ -1.31
RAP1B-222	ENST00000540781	KRTAP4-3	Q9BYR4	195 aa		6.89	□□□□□ -1.31
RAP1B-222	ENST00000540781	GPR98	Q8WXG9	6306 aa		6.88	□□□□□ -1.31
RAP1B-222	ENST00000540781	PSPHP1	O15172	72 aa		6.88	□□□□□ -1.31
RAP1B-222	ENST00000540781		K7ERS5	55 aa		6.87	□□□□□ -1.31
RAP1B-222	ENST00000540781		Q1T7F1	81 aa		6.85	□□□□□ -1.31
RAP1B-222	ENST00000540781	KRTAP25-1	Q3LHN0	102 aa		6.84	□□□□□ -1.31
RAP1B-222	ENST00000540781	LCE4A	Q5TA78	99 aa		6.82	□□□□□ -1.32
RAP1B-222	ENST00000540781	LCE1D	Q5T752	114 aa		6.8	□□□□□ -1.32
RAP1B-222	ENST00000540781	KRTAP4-7	Q9BYR0	210 aa		6.76	□□□□□ -1.33
RAP1B-222	ENST00000540781	MT4	P47944	62 aa		6.74	□□□□□ -1.33
RAP1B-222	ENST00000540781	KRTAP5-4	Q6L8H1	288 aa		6.68	□□□□□ -1.34
RAP1B-222	ENST00000540781	HMCN1	Q96RW7	5635 aa		6.67	□□□□□ -1.34
RAP1B-222	ENST00000540781		A6NED7	52 aa		6.65	□□□□□ -1.34
RAP1B-222	ENST00000540781	KRTAP23-1	A1A580	65 aa		6.57	□□□□□ -1.36
RAP1B-222	ENST00000540781	RPS28	P62857	69 aa	Known RBP	6.5	□□□□□ -1.37
RAP1B-222	ENST00000540781	KRTAP19-4	Q3LI73	84 aa		6.5	□□□□□ -1.37
RAP1B-222	ENST00000540781	CDC42SE1	Q9NRR8	79 aa		6.5	□□□□□ -1.37
RAP1B-222	ENST00000540781	KRTAP15-1	Q3LI76	137 aa		6.46	□□□□□ -1.38
RAP1B-222	ENST00000540781	KRTAP5-5	Q701N2	237 aa	Predicted RBP	6.44	□□□□□ -1.38
RAP1B-222	ENST00000540781	AHNAK2	Q8IVF2	5795 aa		6.44	□□□□□ -1.38
RAP1B-222	ENST00000540781	KRTAP4-12	Q9BQ66	201 aa		6.43	□□□□□ -1.38
RAP1B-222	ENST00000540781	PCP4	P48539	62 aa		6.42	□□□□□ -1.38
RAP1B-222	ENST00000540781	ROMO1	P60602	79 aa		6.4	□□□□□ -1.38
RAP1B-222	ENST00000540781	LCE3C	Q5T5A8	94 aa		6.35	□□□□□ -1.39
RAP1B-222	ENST00000540781	KRTAP20-2	Q3LI61	65 aa		6.31	□□□□□ -1.4
RAP1B-222	ENST00000540781	KRTAP12-4	P60329	112 aa		6.3	□□□□□ -1.4
RAP1B-222	ENST00000540781	SPRR5	A0A1B0GTR4	108 aa		6.29	□□□□□ -1.4
RAP1B-222	ENST00000540781	KRTAP5-10	Q6L8G5	202 aa		6.28	□□□□□ -1.4
RAP1B-222	ENST00000540781	KRTAP9-9	Q9BYP9	154 aa		6.25	□□□□□ -1.41
RAP1B-222	ENST00000540781	KRTAP9-4	Q9BYQ2	154 aa		6.25	□□□□□ -1.41
RAP1B-222	ENST00000540781	SYNE1	Q8NF91	8797 aa	Known RBP	6.2	□□□□□ -1.42
RAP1B-222	ENST00000540781	KRTAP5-3	Q6L8H2	238 aa		6.16	□□□□□ -1.42
RAP1B-222	ENST00000540781	MT1A	P04731	61 aa		6.05	□□□□□ -1.44
RAP1B-222	ENST00000540781	KRTAP5-7	Q6L8G8	165 aa		6.04	□□□□□ -1.44
RAP1B-222	ENST00000540781	KRTAP6-1	Q3LI64	71 aa		6	□□□□□ -1.45
RAP1B-222	ENST00000540781	KRTAP9-6	A8MVA2	160 aa		5.97	□□□□□ -1.45
RAP1B-222	ENST00000540781	KRTAP5-2	Q701N4	177 aa		5.86	□□□□□ -1.47
RAP1B-222	ENST00000540781		H3BS24	57 aa		5.79	□□□□□ -1.48
RAP1B-222	ENST00000540781	KRTAP4-11	Q9BYQ6	195 aa		5.75	□□□□□ -1.49
RAP1B-222	ENST00000540781	KRTAP6-2	Q3LI66	62 aa		5.72	□□□□□ -1.49
RAP1B-222	ENST00000540781	BRK1	Q8WUW1	75 aa		5.72	□□□□□ -1.49
RAP1B-222	ENST00000540781	KRTAP4-2	Q9BYR5	136 aa		5.66	□□□□□ -1.5
RAP1B-222	ENST00000540781	KRTAP5-8	O75690	187 aa		5.55	□□□□□ -1.52
RAP1B-222	ENST00000540781	MT3	P25713	68 aa		5.53	□□□□□ -1.52
RAP1B-222	ENST00000540781	OBSCN	Q5VST9	7968 aa		5.41	□□□□□ -1.54
RAP1B-222	ENST00000540781	PMAIP1	Q13794	54 aa		5.38	□□□□□ -1.55
RAP1B-222	ENST00000540781	AHNAK	Q09666	5890 aa	Known RBP	5.32	□□□□□ -1.56
RAP1B-222	ENST00000540781	MUC5B	Q9HC84	5762 aa	Predicted RBP	5.27	□□□□□ -1.57
RAP1B-222	ENST00000540781	MUC5AC	P98088	5654 aa		5.27	□□□□□ -1.57
RAP1B-222	ENST00000540781	KRTAP5-1	Q6L8H4	278 aa		5.24	□□□□□ -1.57
RAP1B-222	ENST00000540781	PRAC1	Q96KF2	57 aa		5.2	□□□□□ -1.58
RAP1B-222	ENST00000540781	LCE1E	Q5T753	118 aa		5.05	□□□□□ -1.6
RAP1B-222	ENST00000540781	PRO0628	Q9UI54	55 aa		4.95	□□□□□ -1.62
RAP1B-222	ENST00000540781	LCE1B	Q5T7P3	118 aa		4.78	□□□□□ -1.64
RAP1B-222	ENST00000540781	KTN1-AS1	Q86SY8	53 aa		4.74	□□□□□ -1.65
RAP1B-222	ENST00000540781	LCE1C	Q5T751	118 aa		4.68	□□□□□ -1.66
RAP1B-222	ENST00000540781	SVIP	Q8NHG7	77 aa		4.59	□□□□□ -1.67
RAP1B-222	ENST00000540781	LCE3D	Q9BYE3	92 aa		4.59	□□□□□ -1.67
RAP1B-222	ENST00000540781	LUZP6	Q538Z0	58 aa		4.39	□□□□□ -1.71
RAP1B-222	ENST00000540781	LCE3E	Q5T5B0	92 aa		4.33	□□□□□ -1.72
RAP1B-222	ENST00000540781	KRTAP5-6	Q6L8G9	129 aa	Predicted RBP	4.26	□□□□□ -1.73
RAP1B-222	ENST00000540781	KRTAP5-11	Q6L8G4	156 aa		4.24	□□□□□ -1.73
RAP1B-222	ENST00000540781	LCE1F	Q5T754	118 aa		4.11	□□□□□ -1.75
RAP1B-222	ENST00000540781	KRTAP21-2	Q3LI59	83 aa		3.94	□□□□□ -1.78
RAP1B-222	ENST00000540781	PHGR1	C9JFL3	82 aa		3.67	□□□□□ -1.82
RAP1B-222	ENST00000540781	KRTAP4-4	Q9BYR3	166 aa		3.63	□□□□□ -1.83
RAP1B-222	ENST00000540781	NDUFAF8	A1L188	74 aa		3.48	□□□□□ -1.85
RAP1B-222	ENST00000540781	MUC19	Q7Z5P9	8384 aa		3.35	□□□□□ -1.87
RAP1B-222	ENST00000540781	PRM1	P04553	51 aa		3.27	□□□□□ -1.89
RAP1B-222	ENST00000540781		A0A0A0MQY5	61 aa		3.11	□□□□□ -1.91
RAP1B-222	ENST00000540781	INE1	O15225	51 aa		2.78	□□□□□ -1.96
RAP1B-222	ENST00000540781	KRTAP21-1	Q3LI58	79 aa		2.78	□□□□□ -1.96
RAP1B-222	ENST00000540781	MUC16	Q8WXI7	14507 aa		2.35	□□□□□ -2.03

Retrieved 78 of 20,778 RNA–protein pairs in 7 ms