RNA–Protein interactions for RNA: ENST00000540550.6

TSFM-207, Transcript of Ts translation elongation factor, mitochondrial, humanhuman

TSL 2 BASIC

Gene TSFM, Length 1,935 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TSFM-207ENST00000540550 KRTAP9-7A8MTY7 169 aa5.3□□□□□ -1.56
TSFM-207ENST00000540550 KRTAP19-4Q3LI73 84 aa5.26□□□□□ -1.57
TSFM-207ENST00000540550 MT1LQ93083 61 aa5.25□□□□□ -1.57
TSFM-207ENST00000540550 KRTAP9-1A8MXZ3 250 aaPredicted RBP5.18□□□□□ -1.58
TSFM-207ENST00000540550 KRTAP4-7Q9BYR0 210 aa5.13□□□□□ -1.59
TSFM-207ENST00000540550 MACF1Q9UPN3 7388 aaKnown RBP5.11□□□□□ -1.59
TSFM-207ENST00000540550 KRTAP19-3Q7Z4W3 81 aa5.06□□□□□ -1.6
TSFM-207ENST00000540550 SPRR2FQ96RM1 72 aa5.06□□□□□ -1.6
TSFM-207ENST00000540550 KRTAP9-6A8MVA2 160 aa5.04□□□□□ -1.6
TSFM-207ENST00000540550 MUC12Q9UKN1 5478 aa5.03□□□□□ -1.6
TSFM-207ENST00000540550 MT1GP13640 62 aa5.03□□□□□ -1.6
TSFM-207ENST00000540550 MT1MQ8N339 61 aa4.99□□□□□ -1.61
TSFM-207ENST00000540550 SYNE2Q8WXH0 6885 aaKnown RBP4.95□□□□□ -1.62
TSFM-207ENST00000540550 KRTAP5-9P26371 169 aa4.93□□□□□ -1.62
TSFM-207ENST00000540550 KRTAP4-3Q9BYR4 195 aa4.93□□□□□ -1.62
TSFM-207ENST00000540550 LCE5AQ5TCM9 118 aa4.91□□□□□ -1.62
TSFM-207ENST00000540550 MDN1Q9NU22 5596 aa4.84□□□□□ -1.63
TSFM-207ENST00000540550 LCE1AQ5T7P2 110 aa4.8□□□□□ -1.64
TSFM-207ENST00000540550 KRTAP6-3Q3LI67 103 aa4.78□□□□□ -1.64
TSFM-207ENST00000540550 KRTAP2-3P0C7H8 128 aa4.77□□□□□ -1.65
TSFM-207ENST00000540550 KRTAP2-4Q9BYR9 128 aa4.77□□□□□ -1.65
TSFM-207ENST00000540550 KRTAP2-1Q9BYU5 128 aa4.77□□□□□ -1.65
TSFM-207ENST00000540550 SPRR2EP22531 72 aa4.76□□□□□ -1.65
TSFM-207ENST00000540550 SPRR2BP35325 72 aa4.76□□□□□ -1.65
TSFM-207ENST00000540550 SPRR2AP35326 72 aa4.76□□□□□ -1.65
TSFM-207ENST00000540550 DSTQ03001 7570 aaKnown RBP4.62□□□□□ -1.67
TSFM-207ENST00000540550 KRTAP20-1Q3LI63 56 aa4.62□□□□□ -1.67
TSFM-207ENST00000540550 NEBP20929 6669 aa4.6□□□□□ -1.67
TSFM-207ENST00000540550 SPRR2DP22532 72 aa4.58□□□□□ -1.68
TSFM-207ENST00000540550 LCE3BQ5TA77 95 aa4.56□□□□□ -1.68
TSFM-207ENST00000540550 KRTAP9-9Q9BYP9 154 aa4.48□□□□□ -1.69
TSFM-207ENST00000540550 KRTAP9-4Q9BYQ2 154 aa4.48□□□□□ -1.69
TSFM-207ENST00000540550 MT1AP04731 61 aa4.46□□□□□ -1.7
TSFM-207ENST00000540550 KRTAP4-12Q9BQ66 201 aa4.46□□□□□ -1.7
TSFM-207ENST00000540550 KRTAP5-5Q701N2 237 aaPredicted RBP4.44□□□□□ -1.7
TSFM-207ENST00000540550 KRTAP6-1Q3LI64 71 aa4.42□□□□□ -1.7
TSFM-207ENST00000540550 KRTAP5-3Q6L8H2 238 aa4.38□□□□□ -1.71
TSFM-207ENST00000540550 KRTAP4-2Q9BYR5 136 aa4.27□□□□□ -1.73
TSFM-207ENST00000540550 LCE1DQ5T752 114 aa4.24□□□□□ -1.73
TSFM-207ENST00000540550 SYNE1Q8NF91 8797 aaKnown RBP4.22□□□□□ -1.73
TSFM-207ENST00000540550 KRTAP4-9Q9BYQ8 210 aa4.21□□□□□ -1.74
TSFM-207ENST00000540550 GPR98Q8WXG9 6306 aa4.19□□□□□ -1.74
TSFM-207ENST00000540550 KRTAP2-2Q9BYT5 123 aa4.17□□□□□ -1.74
TSFM-207ENST00000540550 KRTAP5-4Q6L8H1 288 aa4.14□□□□□ -1.75
TSFM-207ENST00000540550 KRTAP12-4P60329 112 aa4.13□□□□□ -1.75
TSFM-207ENST00000540550 LCE3DQ9BYE3 92 aa4.06□□□□□ -1.76
TSFM-207ENST00000540550 KRTAP6-2Q3LI66 62 aa4.04□□□□□ -1.76
TSFM-207ENST00000540550 LCE4AQ5TA78 99 aa4.04□□□□□ -1.76
TSFM-207ENST00000540550 MT3P25713 68 aa4.03□□□□□ -1.76
TSFM-207ENST00000540550 MT4P47944 62 aa3.99□□□□□ -1.77
TSFM-207ENST00000540550 LCE3EQ5T5B0 92 aa3.98□□□□□ -1.77
TSFM-207ENST00000540550 KRTAP4-11Q9BYQ6 195 aa3.97□□□□□ -1.77
TSFM-207ENST00000540550 HMCN1Q96RW7 5635 aa3.9□□□□□ -1.79
TSFM-207ENST00000540550 KRTAP20-2Q3LI61 65 aa3.89□□□□□ -1.79
TSFM-207ENST00000540550 KRTAP5-2Q701N4 177 aa3.78□□□□□ -1.8
TSFM-207ENST00000540550 KRTAP5-10Q6L8G5 202 aa3.62□□□□□ -1.83
TSFM-207ENST00000540550 PRM1P04553 51 aa3.6□□□□□ -1.83
TSFM-207ENST00000540550 KRTAP5-7Q6L8G8 165 aa3.6□□□□□ -1.83
TSFM-207ENST00000540550 OBSCNQ5VST9 7968 aa3.6□□□□□ -1.83
TSFM-207ENST00000540550 AHNAK2Q8IVF2 5795 aa3.6□□□□□ -1.83
TSFM-207ENST00000540550 LCE1EQ5T753 118 aa3.4□□□□□ -1.86
TSFM-207ENST00000540550 LCE1BQ5T7P3 118 aa3.27□□□□□ -1.89
TSFM-207ENST00000540550 KRTAP5-1Q6L8H4 278 aa3.25□□□□□ -1.89
TSFM-207ENST00000540550 MUC5ACP98088 5654 aa3.24□□□□□ -1.89
TSFM-207ENST00000540550 AHNAKQ09666 5890 aaKnown RBP3.21□□□□□ -1.89
TSFM-207ENST00000540550 KRTAP5-8O75690 187 aa3.21□□□□□ -1.9
TSFM-207ENST00000540550 LCE1CQ5T751 118 aa3.18□□□□□ -1.9
TSFM-207ENST00000540550 KRTAP5-6Q6L8G9 129 aaPredicted RBP3.11□□□□□ -1.91
TSFM-207ENST00000540550 MUC5BQ9HC84 5762 aaPredicted RBP3.07□□□□□ -1.92
TSFM-207ENST00000540550 KRTAP21-2Q3LI59 83 aa2.87□□□□□ -1.95
TSFM-207ENST00000540550 KRTAP5-11Q6L8G4 156 aa2.78□□□□□ -1.96
TSFM-207ENST00000540550 LCE1FQ5T754 118 aa2.72□□□□□ -1.97
TSFM-207ENST00000540550 KRTAP4-4Q9BYR3 166 aa2.59□□□□□ -1.99
TSFM-207ENST00000540550 KRTAP21-1Q3LI58 79 aa2.42□□□□□ -2.02
TSFM-207ENST00000540550 PHGR1C9JFL3 82 aa2.39□□□□□ -2.03
TSFM-207ENST00000540550 MUC19Q7Z5P9 8384 aa2.15□□□□□ -2.06
TSFM-207ENST00000540550 MUC16Q8WXI7 14507 aa1.58□□□□□ -2.16
Retrieved 77 of 20,778 RNA–protein pairs in 102.5 ms