RNA–Protein interactions for RNA: ENST00000540408.5

COPS7A-211, Transcript of COP9 signalosome subunit 7A, humanhuman

TSL 2

Gene COPS7A, Length 569 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COPS7A-211ENST00000540408 TNP1P09430 55 aa4.25□□□□□ -1.73
COPS7A-211ENST00000540408 SMIM26A0A096LP01 95 aa4.23□□□□□ -1.73
COPS7A-211ENST00000540408 SERP2Q8N6R1 65 aa4.22□□□□□ -1.73
COPS7A-211ENST00000540408 KRTAP20-2Q3LI61 65 aa4.18□□□□□ -1.74
COPS7A-211ENST00000540408 SPRR5A0A1B0GTR4 108 aa4.15□□□□□ -1.75
COPS7A-211ENST00000540408 KRTAP4-7Q9BYR0 210 aa4.15□□□□□ -1.75
COPS7A-211ENST00000540408 KRTAP12-4P60329 112 aa4.14□□□□□ -1.75
COPS7A-211ENST00000540408 A0A1B0GU69 56 aa4.13□□□□□ -1.75
COPS7A-211ENST00000540408 A8MU10 97 aa4.12□□□□□ -1.75
COPS7A-211ENST00000540408 KRTAP12-3P60328 96 aa4.12□□□□□ -1.75
COPS7A-211ENST00000540408 ANAPC13Q9BS18 74 aa4.12□□□□□ -1.75
COPS7A-211ENST00000540408 KRTAP5-5Q701N2 237 aaPredicted RBP4.08□□□□□ -1.76
COPS7A-211ENST00000540408 RPS28P62857 69 aaKnown RBP4.02□□□□□ -1.77
COPS7A-211ENST00000540408 COX7CP15954 63 aa4□□□□□ -1.77
COPS7A-211ENST00000540408 H7BZZ5 65 aa3.98□□□□□ -1.77
COPS7A-211ENST00000540408 LOC100996750A0A140TA64 210 aa3.96□□□□□ -1.78
COPS7A-211ENST00000540408 CCDC179H3BU77 68 aa3.96□□□□□ -1.78
COPS7A-211ENST00000540408 PRR15LQ9BU68 103 aa3.95□□□□□ -1.78
COPS7A-211ENST00000540408 KRTAP19-4Q3LI73 84 aa3.92□□□□□ -1.78
COPS7A-211ENST00000540408 TMEM258P61165 79 aa3.9□□□□□ -1.79
COPS7A-211ENST00000540408 KRTAP4-11Q9BYQ6 195 aa3.9□□□□□ -1.79
COPS7A-211ENST00000540408 PRO0628Q9UI54 55 aa3.87□□□□□ -1.79
COPS7A-211ENST00000540408 KRTAP25-1Q3LHN0 102 aa3.86□□□□□ -1.79
COPS7A-211ENST00000540408 SYNE1Q8NF91 8797 aaKnown RBP3.86□□□□□ -1.79
COPS7A-211ENST00000540408 V9GYY9 64 aa3.82□□□□□ -1.8
COPS7A-211ENST00000540408 UQCR11O14957 56 aa3.79□□□□□ -1.8
COPS7A-211ENST00000540408 KRTAP5-2Q701N4 177 aa3.79□□□□□ -1.8
COPS7A-211ENST00000540408 LINC01558Q9Y6Z2 57 aa3.78□□□□□ -1.8
COPS7A-211ENST00000540408 ATP5EP56381 51 aaPredicted RBP3.76□□□□□ -1.81
COPS7A-211ENST00000540408 KRTAP15-1Q3LI76 137 aa3.76□□□□□ -1.81
COPS7A-211ENST00000540408 LCE3CQ5T5A8 94 aa3.76□□□□□ -1.81
COPS7A-211ENST00000540408 KRTAP5-8O75690 187 aa3.75□□□□□ -1.81
COPS7A-211ENST00000540408 MT1AP04731 61 aa3.75□□□□□ -1.81
COPS7A-211ENST00000540408 K7ERS5 55 aa3.72□□□□□ -1.81
COPS7A-211ENST00000540408 KRTAP6-1Q3LI64 71 aa3.72□□□□□ -1.81
COPS7A-211ENST00000540408 KRTAP23-1A1A580 65 aa3.7□□□□□ -1.82
COPS7A-211ENST00000540408 KRTAP9-4Q9BYQ2 154 aa3.67□□□□□ -1.82
COPS7A-211ENST00000540408 MIR22HGQ0VDD5 57 aa3.66□□□□□ -1.82
COPS7A-211ENST00000540408 PMAIP1Q13794 54 aa3.66□□□□□ -1.82
COPS7A-211ENST00000540408 KRTAP9-9Q9BYP9 154 aa3.66□□□□□ -1.82
COPS7A-211ENST00000540408 BRK1Q8WUW1 75 aa3.65□□□□□ -1.83
COPS7A-211ENST00000540408 MUC5ACP98088 5654 aa3.63□□□□□ -1.83
COPS7A-211ENST00000540408 KRTAP6-2Q3LI66 62 aa3.63□□□□□ -1.83
COPS7A-211ENST00000540408 MUC5BQ9HC84 5762 aaPredicted RBP3.6□□□□□ -1.83
COPS7A-211ENST00000540408 AHNAKQ09666 5890 aaKnown RBP3.57□□□□□ -1.84
COPS7A-211ENST00000540408 OBSCNQ5VST9 7968 aa3.55□□□□□ -1.84
COPS7A-211ENST00000540408 Q1T7F1 81 aa3.55□□□□□ -1.84
COPS7A-211ENST00000540408 KTN1-AS1Q86SY8 53 aa3.51□□□□□ -1.85
COPS7A-211ENST00000540408 KRTAP9-6A8MVA2 160 aa3.49□□□□□ -1.85
COPS7A-211ENST00000540408 MT3P25713 68 aa3.48□□□□□ -1.85
COPS7A-211ENST00000540408 KRTAP5-1Q6L8H4 278 aa3.45□□□□□ -1.86
COPS7A-211ENST00000540408 CDC42SE1Q9NRR8 79 aa3.44□□□□□ -1.86
COPS7A-211ENST00000540408 PSPHP1O15172 72 aa3.41□□□□□ -1.86
COPS7A-211ENST00000540408 A6NED7 52 aa3.35□□□□□ -1.87
COPS7A-211ENST00000540408 ROMO1P60602 79 aa3.35□□□□□ -1.87
COPS7A-211ENST00000540408 H3BS24 57 aa3.33□□□□□ -1.88
COPS7A-211ENST00000540408 KRTAP4-12Q9BQ66 201 aa3.3□□□□□ -1.88
COPS7A-211ENST00000540408 LCE1EQ5T753 118 aa3.25□□□□□ -1.89
COPS7A-211ENST00000540408 PRAC1Q96KF2 57 aa3.12□□□□□ -1.91
COPS7A-211ENST00000540408 LCE1BQ5T7P3 118 aa3.09□□□□□ -1.91
COPS7A-211ENST00000540408 KRTAP4-2Q9BYR5 136 aa3.05□□□□□ -1.92
COPS7A-211ENST00000540408 LCE1CQ5T751 118 aa3.01□□□□□ -1.93
COPS7A-211ENST00000540408 A0A0A0MQY5 61 aa2.96□□□□□ -1.94
COPS7A-211ENST00000540408 NDUFAF8A1L188 74 aa2.8□□□□□ -1.96
COPS7A-211ENST00000540408 LUZP6Q538Z0 58 aa2.78□□□□□ -1.96
COPS7A-211ENST00000540408 LCE1FQ5T754 118 aa2.76□□□□□ -1.97
COPS7A-211ENST00000540408 KRTAP5-11Q6L8G4 156 aa2.73□□□□□ -1.97
COPS7A-211ENST00000540408 KRTAP5-6Q6L8G9 129 aaPredicted RBP2.68□□□□□ -1.98
COPS7A-211ENST00000540408 LCE3DQ9BYE3 92 aa2.67□□□□□ -1.98
COPS7A-211ENST00000540408 PHGR1C9JFL3 82 aa2.63□□□□□ -1.99
COPS7A-211ENST00000540408 LCE3EQ5T5B0 92 aa2.47□□□□□ -2.01
COPS7A-211ENST00000540408 KRTAP21-2Q3LI59 83 aa2.45□□□□□ -2.02
COPS7A-211ENST00000540408 INE1O15225 51 aa2.44□□□□□ -2.02
COPS7A-211ENST00000540408 KRTAP4-4Q9BYR3 166 aa2.3□□□□□ -2.04
COPS7A-211ENST00000540408 MUC19Q7Z5P9 8384 aa2.2□□□□□ -2.06
COPS7A-211ENST00000540408 KRTAP21-1Q3LI58 79 aa2□□□□□ -2.09
COPS7A-211ENST00000540408 PRM1P04553 51 aa1.67□□□□□ -2.14
COPS7A-211ENST00000540408 MUC16Q8WXI7 14507 aa1.5□□□□□ -2.17
Retrieved 78 of 20,778 RNA–protein pairs in 258.3 ms