RNA–Protein interactions for RNA: ENST00000540367.5

CPT1A-206, Transcript of carnitine palmitoyltransferase 1A, humanhuman

TSL 1 (best) BASIC

Gene CPT1A, Length 2,496 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPT1A-206ENST00000540367 KRTAP2-4Q9BYR9 128 aa3.96□□□□□ -1.78
CPT1A-206ENST00000540367 KRTAP2-1Q9BYU5 128 aa3.96□□□□□ -1.78
CPT1A-206ENST00000540367 KRTAP19-7Q3SYF9 63 aa3.92□□□□□ -1.78
CPT1A-206ENST00000540367 FCGBPQ9Y6R7 5405 aaPredicted RBP3.9□□□□□ -1.78
CPT1A-206ENST00000540367 KRTAP19-6Q3LI70 58 aa3.89□□□□□ -1.79
CPT1A-206ENST00000540367 MUC12Q9UKN1 5478 aa3.88□□□□□ -1.79
CPT1A-206ENST00000540367 KRTAP9-9Q9BYP9 154 aa3.82□□□□□ -1.8
CPT1A-206ENST00000540367 MT1LQ93083 61 aa3.82□□□□□ -1.8
CPT1A-206ENST00000540367 MT1EP04732 61 aa3.79□□□□□ -1.8
CPT1A-206ENST00000540367 KRTAP9-7A8MTY7 169 aa3.78□□□□□ -1.8
CPT1A-206ENST00000540367 KRTAP9-1A8MXZ3 250 aaPredicted RBP3.77□□□□□ -1.81
CPT1A-206ENST00000540367 DSTQ03001 7570 aaKnown RBP3.77□□□□□ -1.81
CPT1A-206ENST00000540367 MACF1Q9UPN3 7388 aaKnown RBP3.76□□□□□ -1.81
CPT1A-206ENST00000540367 KRTAP4-3Q9BYR4 195 aa3.74□□□□□ -1.81
CPT1A-206ENST00000540367 SYNE2Q8WXH0 6885 aaKnown RBP3.74□□□□□ -1.81
CPT1A-206ENST00000540367 LOC100996750A0A140TA64 210 aa3.72□□□□□ -1.81
CPT1A-206ENST00000540367 LCE4AQ5TA78 99 aa3.71□□□□□ -1.82
CPT1A-206ENST00000540367 MDN1Q9NU22 5596 aa3.63□□□□□ -1.83
CPT1A-206ENST00000540367 KRTAP2-2Q9BYT5 123 aa3.63□□□□□ -1.83
CPT1A-206ENST00000540367 MT1GP13640 62 aa3.62□□□□□ -1.83
CPT1A-206ENST00000540367 LCE1FQ5T754 118 aa3.62□□□□□ -1.83
CPT1A-206ENST00000540367 KRTAP6-3Q3LI67 103 aa3.61□□□□□ -1.83
CPT1A-206ENST00000540367 MT1MQ8N339 61 aa3.53□□□□□ -1.84
CPT1A-206ENST00000540367 KRTAP12-4P60329 112 aa3.52□□□□□ -1.85
CPT1A-206ENST00000540367 SYNE1Q8NF91 8797 aaKnown RBP3.52□□□□□ -1.85
CPT1A-206ENST00000540367 KRTAP5-9P26371 169 aa3.51□□□□□ -1.85
CPT1A-206ENST00000540367 LCE1AQ5T7P2 110 aa3.51□□□□□ -1.85
CPT1A-206ENST00000540367 KRTAP19-3Q7Z4W3 81 aa3.5□□□□□ -1.85
CPT1A-206ENST00000540367 SPRR2FQ96RM1 72 aa3.49□□□□□ -1.85
CPT1A-206ENST00000540367 KRTAP4-9Q9BYQ8 210 aa3.39□□□□□ -1.87
CPT1A-206ENST00000540367 NEBP20929 6669 aa3.39□□□□□ -1.87
CPT1A-206ENST00000540367 LCE3BQ5TA77 95 aa3.37□□□□□ -1.87
CPT1A-206ENST00000540367 OBSCNQ5VST9 7968 aa3.36□□□□□ -1.87
CPT1A-206ENST00000540367 MT1AP04731 61 aa3.32□□□□□ -1.88
CPT1A-206ENST00000540367 MT3P25713 68 aa3.32□□□□□ -1.88
CPT1A-206ENST00000540367 SPRR2EP22531 72 aa3.31□□□□□ -1.88
CPT1A-206ENST00000540367 SPRR2BP35325 72 aa3.31□□□□□ -1.88
CPT1A-206ENST00000540367 SPRR2AP35326 72 aa3.31□□□□□ -1.88
CPT1A-206ENST00000540367 KRTAP20-1Q3LI63 56 aa3.27□□□□□ -1.89
CPT1A-206ENST00000540367 KRTAP6-1Q3LI64 71 aa3.24□□□□□ -1.89
CPT1A-206ENST00000540367 LCE3DQ9BYE3 92 aa3.22□□□□□ -1.89
CPT1A-206ENST00000540367 SPRR2DP22532 72 aa3.2□□□□□ -1.9
CPT1A-206ENST00000540367 LCE3EQ5T5B0 92 aa3.2□□□□□ -1.9
CPT1A-206ENST00000540367 LCE1EQ5T753 118 aa3.17□□□□□ -1.9
CPT1A-206ENST00000540367 KRTAP5-5Q701N2 237 aaPredicted RBP3.17□□□□□ -1.9
CPT1A-206ENST00000540367 PRM1P04553 51 aa3.14□□□□□ -1.91
CPT1A-206ENST00000540367 GPR98Q8WXG9 6306 aa3.13□□□□□ -1.91
CPT1A-206ENST00000540367 KRTAP4-12Q9BQ66 201 aa3.08□□□□□ -1.92
CPT1A-206ENST00000540367 LCE1DQ5T752 114 aa3.03□□□□□ -1.92
CPT1A-206ENST00000540367 KRTAP6-2Q3LI66 62 aa3□□□□□ -1.93
CPT1A-206ENST00000540367 KRTAP5-4Q6L8H1 288 aa2.85□□□□□ -1.95
CPT1A-206ENST00000540367 KRTAP4-6Q9BYQ5 205 aa2.81□□□□□ -1.96
CPT1A-206ENST00000540367 MT4P47944 62 aa2.79□□□□□ -1.96
CPT1A-206ENST00000540367 HMCN1Q96RW7 5635 aa2.78□□□□□ -1.96
CPT1A-206ENST00000540367 KRTAP5-7Q6L8G8 165 aa2.68□□□□□ -1.98
CPT1A-206ENST00000540367 KRTAP20-2Q3LI61 65 aa2.66□□□□□ -1.98
CPT1A-206ENST00000540367 AHNAK2Q8IVF2 5795 aa2.6□□□□□ -1.99
CPT1A-206ENST00000540367 KRTAP5-10Q6L8G5 202 aa2.6□□□□□ -1.99
CPT1A-206ENST00000540367 KRTAP5-3Q6L8H2 238 aa2.58□□□□□ -2
CPT1A-206ENST00000540367 KRTAP5-2Q701N4 177 aa2.53□□□□□ -2
CPT1A-206ENST00000540367 MUC5ACP98088 5654 aa2.5□□□□□ -2.01
CPT1A-206ENST00000540367 MUC5BQ9HC84 5762 aaPredicted RBP2.5□□□□□ -2.01
CPT1A-206ENST00000540367 AHNAKQ09666 5890 aaKnown RBP2.46□□□□□ -2.02
CPT1A-206ENST00000540367 KRTAP4-11Q9BYQ6 195 aa2.44□□□□□ -2.02
CPT1A-206ENST00000540367 LCE1BQ5T7P3 118 aa2.39□□□□□ -2.03
CPT1A-206ENST00000540367 KRTAP5-8O75690 187 aa2.3□□□□□ -2.04
CPT1A-206ENST00000540367 KRTAP5-1Q6L8H4 278 aa2.29□□□□□ -2.04
CPT1A-206ENST00000540367 KRTAP4-2Q9BYR5 136 aa2.19□□□□□ -2.06
CPT1A-206ENST00000540367 LCE1CQ5T751 118 aa2.17□□□□□ -2.06
CPT1A-206ENST00000540367 MUC19Q7Z5P9 8384 aa2.12□□□□□ -2.07
CPT1A-206ENST00000540367 KRTAP21-2Q3LI59 83 aa2.09□□□□□ -2.08
CPT1A-206ENST00000540367 KRTAP5-6Q6L8G9 129 aaPredicted RBP2.08□□□□□ -2.08
CPT1A-206ENST00000540367 KRTAP4-4Q9BYR3 166 aa2.07□□□□□ -2.08
CPT1A-206ENST00000540367 KRTAP21-1Q3LI58 79 aa2.03□□□□□ -2.08
CPT1A-206ENST00000540367 KRTAP5-11Q6L8G4 156 aa1.85□□□□□ -2.11
CPT1A-206ENST00000540367 PHGR1C9JFL3 82 aa1.6□□□□□ -2.15
CPT1A-206ENST00000540367 MUC16Q8WXI7 14507 aa1.08□□□□□ -2.24
Retrieved 77 of 20,778 RNA–protein pairs in 67.4 ms