RNA–Protein interactions for RNA: ENST00000540183.1

SEMA4D-222, Transcript of semaphorin 4D, humanhuman

TSL 3

Gene SEMA4D, Length 176 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SEMA4D-222ENST00000540183 K7ERU9 68 aa4.77□□□□□ -1.65
SEMA4D-222ENST00000540183 KRTAP20-2Q3LI61 65 aa4.76□□□□□ -1.65
SEMA4D-222ENST00000540183 TNP1P09430 55 aa4.75□□□□□ -1.65
SEMA4D-222ENST00000540183 SMIM26A0A096LP01 95 aa4.71□□□□□ -1.66
SEMA4D-222ENST00000540183 KRTAP5-5Q701N2 237 aaPredicted RBP4.7□□□□□ -1.66
SEMA4D-222ENST00000540183 KRTAP12-3P60328 96 aa4.67□□□□□ -1.66
SEMA4D-222ENST00000540183 SPRR5A0A1B0GTR4 108 aa4.66□□□□□ -1.66
SEMA4D-222ENST00000540183 A0A1B0GU69 56 aa4.66□□□□□ -1.66
SEMA4D-222ENST00000540183 LOC100996750A0A140TA64 210 aa4.61□□□□□ -1.67
SEMA4D-222ENST00000540183 H7BZZ5 65 aa4.61□□□□□ -1.67
SEMA4D-222ENST00000540183 SYNE1Q8NF91 8797 aaKnown RBP4.59□□□□□ -1.67
SEMA4D-222ENST00000540183 KRTAP12-4P60329 112 aa4.59□□□□□ -1.67
SEMA4D-222ENST00000540183 COX7CP15954 63 aa4.58□□□□□ -1.68
SEMA4D-222ENST00000540183 KRTAP4-11Q9BYQ6 195 aa4.4□□□□□ -1.71
SEMA4D-222ENST00000540183 PRR15LQ9BU68 103 aa4.38□□□□□ -1.71
SEMA4D-222ENST00000540183 KRTAP5-2Q701N4 177 aa4.34□□□□□ -1.71
SEMA4D-222ENST00000540183 LINC01558Q9Y6Z2 57 aa4.33□□□□□ -1.72
SEMA4D-222ENST00000540183 AHNAKQ09666 5890 aaKnown RBP4.33□□□□□ -1.72
SEMA4D-222ENST00000540183 KRTAP25-1Q3LHN0 102 aa4.32□□□□□ -1.72
SEMA4D-222ENST00000540183 KRTAP6-1Q3LI64 71 aa4.31□□□□□ -1.72
SEMA4D-222ENST00000540183 MUC5ACP98088 5654 aa4.29□□□□□ -1.72
SEMA4D-222ENST00000540183 KRTAP5-8O75690 187 aa4.28□□□□□ -1.72
SEMA4D-222ENST00000540183 LCE3CQ5T5A8 94 aa4.28□□□□□ -1.72
SEMA4D-222ENST00000540183 MT1AP04731 61 aa4.27□□□□□ -1.73
SEMA4D-222ENST00000540183 KRTAP15-1Q3LI76 137 aa4.26□□□□□ -1.73
SEMA4D-222ENST00000540183 UQCR11O14957 56 aa4.25□□□□□ -1.73
SEMA4D-222ENST00000540183 KRTAP19-4Q3LI73 84 aa4.25□□□□□ -1.73
SEMA4D-222ENST00000540183 ANAPC13Q9BS18 74 aa4.25□□□□□ -1.73
SEMA4D-222ENST00000540183 MUC5BQ9HC84 5762 aaPredicted RBP4.25□□□□□ -1.73
SEMA4D-222ENST00000540183 CCDC179H3BU77 68 aa4.24□□□□□ -1.73
SEMA4D-222ENST00000540183 OBSCNQ5VST9 7968 aa4.19□□□□□ -1.74
SEMA4D-222ENST00000540183 ATP5EP56381 51 aaPredicted RBP4.17□□□□□ -1.74
SEMA4D-222ENST00000540183 KRTAP9-4Q9BYQ2 154 aa4.17□□□□□ -1.74
SEMA4D-222ENST00000540183 KRTAP6-2Q3LI66 62 aa4.16□□□□□ -1.74
SEMA4D-222ENST00000540183 MIR22HGQ0VDD5 57 aa4.15□□□□□ -1.75
SEMA4D-222ENST00000540183 KRTAP9-6A8MVA2 160 aa4.12□□□□□ -1.75
SEMA4D-222ENST00000540183 KRTAP23-1A1A580 65 aa4.11□□□□□ -1.75
SEMA4D-222ENST00000540183 KRTAP9-9Q9BYP9 154 aa4.07□□□□□ -1.76
SEMA4D-222ENST00000540183 K7ERS5 55 aa4.06□□□□□ -1.76
SEMA4D-222ENST00000540183 TMEM258P61165 79 aa3.97□□□□□ -1.77
SEMA4D-222ENST00000540183 KRTAP5-1Q6L8H4 278 aa3.96□□□□□ -1.78
SEMA4D-222ENST00000540183 PSPHP1O15172 72 aa3.95□□□□□ -1.78
SEMA4D-222ENST00000540183 MT3P25713 68 aa3.89□□□□□ -1.79
SEMA4D-222ENST00000540183 RPS28P62857 69 aaKnown RBP3.86□□□□□ -1.79
SEMA4D-222ENST00000540183 Q1T7F1 81 aa3.85□□□□□ -1.79
SEMA4D-222ENST00000540183 CDC42SE1Q9NRR8 79 aa3.85□□□□□ -1.79
SEMA4D-222ENST00000540183 ROMO1P60602 79 aa3.79□□□□□ -1.8
SEMA4D-222ENST00000540183 V9GYY9 64 aa3.78□□□□□ -1.8
SEMA4D-222ENST00000540183 A6NED7 52 aa3.75□□□□□ -1.81
SEMA4D-222ENST00000540183 LCE1EQ5T753 118 aa3.62□□□□□ -1.83
SEMA4D-222ENST00000540183 KRTAP4-2Q9BYR5 136 aa3.52□□□□□ -1.85
SEMA4D-222ENST00000540183 LCE1BQ5T7P3 118 aa3.51□□□□□ -1.85
SEMA4D-222ENST00000540183 LCE1CQ5T751 118 aa3.37□□□□□ -1.87
SEMA4D-222ENST00000540183 KRTAP4-12Q9BQ66 201 aa3.35□□□□□ -1.87
SEMA4D-222ENST00000540183 KRTAP5-11Q6L8G4 156 aa3.1□□□□□ -1.91
SEMA4D-222ENST00000540183 LCE1FQ5T754 118 aa3.03□□□□□ -1.92
SEMA4D-222ENST00000540183 KRTAP5-6Q6L8G9 129 aaPredicted RBP3.03□□□□□ -1.92
SEMA4D-222ENST00000540183 LCE3DQ9BYE3 92 aa3.01□□□□□ -1.93
SEMA4D-222ENST00000540183 PHGR1C9JFL3 82 aa2.93□□□□□ -1.94
SEMA4D-222ENST00000540183 PCP4P48539 62 aa2.91□□□□□ -1.94
SEMA4D-222ENST00000540183 BRK1Q8WUW1 75 aa2.85□□□□□ -1.95
SEMA4D-222ENST00000540183 KRTAP21-2Q3LI59 83 aa2.83□□□□□ -1.96
SEMA4D-222ENST00000540183 LCE3EQ5T5B0 92 aa2.78□□□□□ -1.96
SEMA4D-222ENST00000540183 PRAC1Q96KF2 57 aa2.73□□□□□ -1.97
SEMA4D-222ENST00000540183 KRTAP4-4Q9BYR3 166 aa2.7□□□□□ -1.98
SEMA4D-222ENST00000540183 PMAIP1Q13794 54 aa2.62□□□□□ -1.99
SEMA4D-222ENST00000540183 MUC19Q7Z5P9 8384 aa2.6□□□□□ -1.99
SEMA4D-222ENST00000540183 LUZP6Q538Z0 58 aa2.22□□□□□ -2.05
SEMA4D-222ENST00000540183 KRTAP21-1Q3LI58 79 aa2.19□□□□□ -2.06
SEMA4D-222ENST00000540183 SVIPQ8NHG7 77 aa2.1□□□□□ -2.07
SEMA4D-222ENST00000540183 KTN1-AS1Q86SY8 53 aa2.09□□□□□ -2.07
SEMA4D-222ENST00000540183 PRO0628Q9UI54 55 aa2.07□□□□□ -2.08
SEMA4D-222ENST00000540183 PRM1P04553 51 aa1.96□□□□□ -2.1
SEMA4D-222ENST00000540183 MUC16Q8WXI7 14507 aa1.81□□□□□ -2.12
SEMA4D-222ENST00000540183 NDUFAF8A1L188 74 aa1.45□□□□□ -2.18
SEMA4D-222ENST00000540183 INE1O15225 51 aa0.99□□□□□ -2.25
SEMA4D-222ENST00000540183 A0A0A0MQY5 61 aa0.79□□□□□ -2.28
SEMA4D-222ENST00000540183 H3BS24 57 aa-0.27□□□□□ -2.45
Retrieved 78 of 20,778 RNA–protein pairs in 41.5 ms