RNA–Protein interactions for RNA: ENST00000540109.5

PTPRD-214, Transcript of protein tyrosine phosphatase, receptor type D, humanhuman

APPRIS P1 TSL 5 BASIC

Gene PTPRD, Length 6,210 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRD-214ENST00000540109 SSPOA2VEC9 5147 aa2□□□□□ -2.09
PTPRD-214ENST00000540109 MT1GP13640 62 aa1.99□□□□□ -2.09
PTPRD-214ENST00000540109 LCE3DQ9BYE3 92 aa1.99□□□□□ -2.09
PTPRD-214ENST00000540109 KRTAP2-3P0C7H8 128 aa1.98□□□□□ -2.09
PTPRD-214ENST00000540109 KRTAP2-4Q9BYR9 128 aa1.98□□□□□ -2.09
PTPRD-214ENST00000540109 KRTAP2-1Q9BYU5 128 aa1.98□□□□□ -2.09
PTPRD-214ENST00000540109 SPRR2EP22531 72 aa1.98□□□□□ -2.09
PTPRD-214ENST00000540109 SPRR2BP35325 72 aa1.98□□□□□ -2.09
PTPRD-214ENST00000540109 SPRR2AP35326 72 aa1.98□□□□□ -2.09
PTPRD-214ENST00000540109 KRTAP19-3Q7Z4W3 81 aa1.96□□□□□ -2.09
PTPRD-214ENST00000540109 KRTAP4-7Q9BYR0 210 aa1.96□□□□□ -2.1
PTPRD-214ENST00000540109 MT1MQ8N339 61 aa1.92□□□□□ -2.1
PTPRD-214ENST00000540109 SPRR2DP22532 72 aa1.92□□□□□ -2.1
PTPRD-214ENST00000540109 KRTAP9-6A0A140TA67 174 aa1.9□□□□□ -2.11
PTPRD-214ENST00000540109 KRTAP9-6A8MVA2 160 aa1.89□□□□□ -2.11
PTPRD-214ENST00000540109 MT1AP04731 61 aa1.89□□□□□ -2.11
PTPRD-214ENST00000540109 LCE5AQ5TCM9 118 aa1.89□□□□□ -2.11
PTPRD-214ENST00000540109 KRTAP5-9P26371 169 aa1.86□□□□□ -2.11
PTPRD-214ENST00000540109 KRTAP9-2Q9BYQ4 174 aa1.86□□□□□ -2.11
PTPRD-214ENST00000540109 LCE1AQ5T7P2 110 aa1.85□□□□□ -2.11
PTPRD-214ENST00000540109 GPR98Q8WXG9 6306 aa1.85□□□□□ -2.11
PTPRD-214ENST00000540109 FCGBPQ9Y6R7 5405 aaPredicted RBP1.84□□□□□ -2.11
PTPRD-214ENST00000540109 LOC100996750A0A140TA64 210 aa1.83□□□□□ -2.12
PTPRD-214ENST00000540109 KRTAP4-9Q9BYQ8 210 aa1.82□□□□□ -2.12
PTPRD-214ENST00000540109 LCE1EQ5T753 118 aa1.81□□□□□ -2.12
PTPRD-214ENST00000540109 DSTQ03001 7570 aaKnown RBP1.8□□□□□ -2.12
PTPRD-214ENST00000540109 OBSCNQ5VST9 7968 aa1.8□□□□□ -2.12
PTPRD-214ENST00000540109 MT4P47944 62 aa1.79□□□□□ -2.12
PTPRD-214ENST00000540109 MACF1Q9UPN3 7388 aaKnown RBP1.79□□□□□ -2.12
PTPRD-214ENST00000540109 KRTAP6-3Q3LI67 103 aa1.79□□□□□ -2.12
PTPRD-214ENST00000540109 SYNE1Q8NF91 8797 aaKnown RBP1.79□□□□□ -2.12
PTPRD-214ENST00000540109 KMT2DO14686 5537 aa1.78□□□□□ -2.12
PTPRD-214ENST00000540109 KRTAP20-1Q3LI63 56 aa1.77□□□□□ -2.13
PTPRD-214ENST00000540109 KRTAP9-7A8MTY7 169 aa1.76□□□□□ -2.13
PTPRD-214ENST00000540109 KRTAP4-3Q9BYR4 195 aa1.76□□□□□ -2.13
PTPRD-214ENST00000540109 LCE1CQ5T751 118 aa1.72□□□□□ -2.13
PTPRD-214ENST00000540109 LCE1FQ5T754 118 aa1.72□□□□□ -2.13
PTPRD-214ENST00000540109 LCE1BQ5T7P3 118 aa1.71□□□□□ -2.14
PTPRD-214ENST00000540109 KRTAP5-5Q701N2 237 aaPredicted RBP1.71□□□□□ -2.14
PTPRD-214ENST00000540109 LCE1DQ5T752 114 aa1.7□□□□□ -2.14
PTPRD-214ENST00000540109 KRTAP9-1A8MXZ3 250 aaPredicted RBP1.69□□□□□ -2.14
PTPRD-214ENST00000540109 KRTAP6-2Q3LI66 62 aa1.69□□□□□ -2.14
PTPRD-214ENST00000540109 FSIP2Q5CZC0 6907 aa1.68□□□□□ -2.14
PTPRD-214ENST00000540109 LCE4AQ5TA78 99 aa1.67□□□□□ -2.14
PTPRD-214ENST00000540109 KRTAP6-1Q3LI64 71 aa1.66□□□□□ -2.14
PTPRD-214ENST00000540109 MUC12Q9UKN1 5478 aa1.65□□□□□ -2.15
PTPRD-214ENST00000540109 KRTAP9-4Q9BYQ2 154 aa1.65□□□□□ -2.15
PTPRD-214ENST00000540109 SYNE2Q8WXH0 6885 aaKnown RBP1.62□□□□□ -2.15
PTPRD-214ENST00000540109 NEBP20929 6669 aa1.62□□□□□ -2.15
PTPRD-214ENST00000540109 KRTAP2-2Q9BYT5 123 aa1.6□□□□□ -2.15
PTPRD-214ENST00000540109 KRTAP4-6Q9BYQ5 205 aa1.6□□□□□ -2.15
PTPRD-214ENST00000540109 MDN1Q9NU22 5596 aa1.6□□□□□ -2.15
PTPRD-214ENST00000540109 KRTAP5-4Q6L8H1 288 aa1.59□□□□□ -2.15
PTPRD-214ENST00000540109 MUC19Q7Z5P9 8384 aa1.59□□□□□ -2.16
PTPRD-214ENST00000540109 KRTAP4-11Q9BYQ6 195 aa1.51□□□□□ -2.17
PTPRD-214ENST00000540109 KRTAP9-9Q9BYP9 154 aa1.48□□□□□ -2.17
PTPRD-214ENST00000540109 KRTAP5-2Q701N4 177 aa1.47□□□□□ -2.17
PTPRD-214ENST00000540109 KRTAP20-2Q3LI61 65 aa1.46□□□□□ -2.18
PTPRD-214ENST00000540109 KRTAP4-12Q9BQ66 201 aa1.46□□□□□ -2.18
PTPRD-214ENST00000540109 KRTAP4-2Q9BYR5 136 aa1.46□□□□□ -2.18
PTPRD-214ENST00000540109 KRTAP5-3Q6L8H2 238 aa1.39□□□□□ -2.19
PTPRD-214ENST00000540109 HMCN1Q96RW7 5635 aa1.32□□□□□ -2.2
PTPRD-214ENST00000540109 KRTAP5-10Q6L8G5 202 aa1.26□□□□□ -2.21
PTPRD-214ENST00000540109 KRTAP5-8O75690 187 aa1.24□□□□□ -2.21
PTPRD-214ENST00000540109 KRTAP4-4Q9BYR3 166 aa1.24□□□□□ -2.21
PTPRD-214ENST00000540109 KRTAP5-7Q6L8G8 165 aa1.23□□□□□ -2.21
PTPRD-214ENST00000540109 KRTAP5-6Q6L8G9 129 aaPredicted RBP1.22□□□□□ -2.21
PTPRD-214ENST00000540109 KRTAP5-1Q6L8H4 278 aa1.21□□□□□ -2.22
PTPRD-214ENST00000540109 MUC5ACP98088 5654 aa1.21□□□□□ -2.22
PTPRD-214ENST00000540109 AHNAK2Q8IVF2 5795 aa1.17□□□□□ -2.22
PTPRD-214ENST00000540109 KRTAP5-11Q6L8G4 156 aa1.11□□□□□ -2.23
PTPRD-214ENST00000540109 PHGR1C9JFL3 82 aa1.11□□□□□ -2.23
PTPRD-214ENST00000540109 MUC5BQ9HC84 5762 aaPredicted RBP1.11□□□□□ -2.23
PTPRD-214ENST00000540109 KRTAP21-2Q3LI59 83 aa1.1□□□□□ -2.23
PTPRD-214ENST00000540109 KRTAP21-1Q3LI58 79 aa1.02□□□□□ -2.25
PTPRD-214ENST00000540109 AHNAKQ09666 5890 aaKnown RBP0.97□□□□□ -2.25
PTPRD-214ENST00000540109 MUC16Q8WXI7 14507 aa0.61□□□□□ -2.31
Retrieved 77 of 20,778 RNA–protein pairs in 95.9 ms