RNA–Protein interactions for RNA: ENST00000539976.1

MC1R-201, Transcript of melanocortin 1 receptor, humanhuman

TSL 5

Gene MC1R, Length 2,464 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MC1R-201ENST00000539976 CRCT1Q9UGL9 99 aa4.79□□□□□ -1.64
MC1R-201ENST00000539976 KRTAP19-4Q3LI73 84 aa4.73□□□□□ -1.65
MC1R-201ENST00000539976 KRTAP19-6Q3LI70 58 aa4.69□□□□□ -1.66
MC1R-201ENST00000539976 MT1LQ93083 61 aa4.68□□□□□ -1.66
MC1R-201ENST00000539976 FCGBPQ9Y6R7 5405 aaPredicted RBP4.67□□□□□ -1.66
MC1R-201ENST00000539976 MT1EP04732 61 aa4.62□□□□□ -1.67
MC1R-201ENST00000539976 MACF1Q9UPN3 7388 aaKnown RBP4.49□□□□□ -1.69
MC1R-201ENST00000539976 LOC100996750A0A140TA64 210 aa4.48□□□□□ -1.69
MC1R-201ENST00000539976 KRTAP12-4P60329 112 aa4.48□□□□□ -1.69
MC1R-201ENST00000539976 KRTAP9-1A8MXZ3 250 aaPredicted RBP4.45□□□□□ -1.7
MC1R-201ENST00000539976 SYNE2Q8WXH0 6885 aaKnown RBP4.42□□□□□ -1.7
MC1R-201ENST00000539976 KRTAP4-3Q9BYR4 195 aa4.42□□□□□ -1.7
MC1R-201ENST00000539976 MT1GP13640 62 aa4.41□□□□□ -1.7
MC1R-201ENST00000539976 MUC12Q9UKN1 5478 aa4.38□□□□□ -1.71
MC1R-201ENST00000539976 KRTAP9-7A8MTY7 169 aa4.36□□□□□ -1.71
MC1R-201ENST00000539976 MT1MQ8N339 61 aa4.3□□□□□ -1.72
MC1R-201ENST00000539976 KRTAP19-3Q7Z4W3 81 aa4.29□□□□□ -1.72
MC1R-201ENST00000539976 SPRR2FQ96RM1 72 aa4.27□□□□□ -1.73
MC1R-201ENST00000539976 KRTAP6-3Q3LI67 103 aa4.24□□□□□ -1.73
MC1R-201ENST00000539976 LCE3BQ5TA77 95 aa4.17□□□□□ -1.74
MC1R-201ENST00000539976 LCE5AQ5TCM9 118 aa4.17□□□□□ -1.74
MC1R-201ENST00000539976 KRTAP5-9P26371 169 aa4.15□□□□□ -1.74
MC1R-201ENST00000539976 KRTAP4-9Q9BYQ8 210 aa4.15□□□□□ -1.74
MC1R-201ENST00000539976 MDN1Q9NU22 5596 aa4.15□□□□□ -1.75
MC1R-201ENST00000539976 MT1AP04731 61 aa4.12□□□□□ -1.75
MC1R-201ENST00000539976 DSTQ03001 7570 aaKnown RBP4.06□□□□□ -1.76
MC1R-201ENST00000539976 SYNE1Q8NF91 8797 aaKnown RBP4.04□□□□□ -1.76
MC1R-201ENST00000539976 LCE3DQ9BYE3 92 aa4.03□□□□□ -1.76
MC1R-201ENST00000539976 LCE1AQ5T7P2 110 aa4.02□□□□□ -1.77
MC1R-201ENST00000539976 PRM1P04553 51 aa4.01□□□□□ -1.77
MC1R-201ENST00000539976 LCE3EQ5T5B0 92 aa4.01□□□□□ -1.77
MC1R-201ENST00000539976 KRTAP5-5Q701N2 237 aaPredicted RBP4.01□□□□□ -1.77
MC1R-201ENST00000539976 SPRR2EP22531 72 aa3.99□□□□□ -1.77
MC1R-201ENST00000539976 SPRR2BP35325 72 aa3.99□□□□□ -1.77
MC1R-201ENST00000539976 SPRR2AP35326 72 aa3.99□□□□□ -1.77
MC1R-201ENST00000539976 KRTAP6-1Q3LI64 71 aa3.98□□□□□ -1.77
MC1R-201ENST00000539976 NEBP20929 6669 aa3.97□□□□□ -1.77
MC1R-201ENST00000539976 KRTAP20-1Q3LI63 56 aa3.86□□□□□ -1.79
MC1R-201ENST00000539976 SPRR2DP22532 72 aa3.84□□□□□ -1.8
MC1R-201ENST00000539976 KRTAP6-2Q3LI66 62 aa3.78□□□□□ -1.8
MC1R-201ENST00000539976 KRTAP2-2Q9BYT5 123 aa3.7□□□□□ -1.82
MC1R-201ENST00000539976 KRTAP9-4Q9BYQ2 154 aa3.66□□□□□ -1.82
MC1R-201ENST00000539976 MT3P25713 68 aa3.49□□□□□ -1.85
MC1R-201ENST00000539976 OBSCNQ5VST9 7968 aa3.47□□□□□ -1.85
MC1R-201ENST00000539976 KRTAP5-4Q6L8H1 288 aa3.45□□□□□ -1.86
MC1R-201ENST00000539976 MT4P47944 62 aa3.39□□□□□ -1.87
MC1R-201ENST00000539976 KRTAP4-6Q9BYQ5 205 aa3.37□□□□□ -1.87
MC1R-201ENST00000539976 LCE4AQ5TA78 99 aa3.36□□□□□ -1.87
MC1R-201ENST00000539976 LCE1DQ5T752 114 aa3.34□□□□□ -1.87
MC1R-201ENST00000539976 HMCN1Q96RW7 5635 aa3.34□□□□□ -1.88
MC1R-201ENST00000539976 LCE1EQ5T753 118 aa3.32□□□□□ -1.88
MC1R-201ENST00000539976 KRTAP20-2Q3LI61 65 aa3.26□□□□□ -1.89
MC1R-201ENST00000539976 KRTAP5-2Q701N4 177 aa3.18□□□□□ -1.9
MC1R-201ENST00000539976 GPR98Q8WXG9 6306 aa3.18□□□□□ -1.9
MC1R-201ENST00000539976 KRTAP5-3Q6L8H2 238 aa3.13□□□□□ -1.91
MC1R-201ENST00000539976 LCE1FQ5T754 118 aa3.13□□□□□ -1.91
MC1R-201ENST00000539976 AHNAK2Q8IVF2 5795 aa3.03□□□□□ -1.92
MC1R-201ENST00000539976 KRTAP5-10Q6L8G5 202 aa3.01□□□□□ -1.93
MC1R-201ENST00000539976 KRTAP4-11Q9BYQ6 195 aa2.99□□□□□ -1.93
MC1R-201ENST00000539976 MUC5ACP98088 5654 aa2.98□□□□□ -1.93
MC1R-201ENST00000539976 KRTAP5-7Q6L8G8 165 aa2.91□□□□□ -1.94
MC1R-201ENST00000539976 KRTAP5-1Q6L8H4 278 aa2.81□□□□□ -1.96
MC1R-201ENST00000539976 LCE1BQ5T7P3 118 aa2.8□□□□□ -1.96
MC1R-201ENST00000539976 KRTAP5-8O75690 187 aa2.75□□□□□ -1.97
MC1R-201ENST00000539976 KRTAP4-2Q9BYR5 136 aa2.71□□□□□ -1.97
MC1R-201ENST00000539976 LCE1CQ5T751 118 aa2.67□□□□□ -1.98
MC1R-201ENST00000539976 KRTAP21-1Q3LI58 79 aa2.57□□□□□ -2
MC1R-201ENST00000539976 KRTAP21-2Q3LI59 83 aa2.56□□□□□ -2
MC1R-201ENST00000539976 KRTAP9-9Q9BYP9 154 aa2.55□□□□□ -2
MC1R-201ENST00000539976 KRTAP5-6Q6L8G9 129 aaPredicted RBP2.5□□□□□ -2.01
MC1R-201ENST00000539976 AHNAKQ09666 5890 aaKnown RBP2.49□□□□□ -2.01
MC1R-201ENST00000539976 MUC5BQ9HC84 5762 aaPredicted RBP2.44□□□□□ -2.02
MC1R-201ENST00000539976 MUC19Q7Z5P9 8384 aa2.35□□□□□ -2.03
MC1R-201ENST00000539976 KRTAP4-4Q9BYR3 166 aa2.35□□□□□ -2.03
MC1R-201ENST00000539976 KRTAP5-11Q6L8G4 156 aa2.33□□□□□ -2.04
MC1R-201ENST00000539976 KRTAP4-12Q9BQ66 201 aa2.26□□□□□ -2.05
MC1R-201ENST00000539976 PHGR1C9JFL3 82 aa2.01□□□□□ -2.09
MC1R-201ENST00000539976 MUC16Q8WXI7 14507 aa1.33□□□□□ -2.2
Retrieved 78 of 20,778 RNA–protein pairs in 76 ms