RNA–Protein interactions for RNA: ENST00000539921.5

SNHG1-211, Transcript of small nucleolar RNA host gene 1, humanhuman

TSL 2 BASIC

Gene SNHG1, Length 1,071 nt, Biotype lincRNA, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNHG1-211ENST00000539921 LPAP08519 4548 aa2.21□□□□□ -2.06
SNHG1-211ENST00000539921 KRTAP10-7P60409 375 aaPredicted RBP2.19□□□□□ -2.06
SNHG1-211ENST00000539921 KRTAP19-8Q3LI54 63 aa2.19□□□□□ -2.06
SNHG1-211ENST00000539921 MUC17Q685J3 4493 aa2.18□□□□□ -2.06
SNHG1-211ENST00000539921 MUC2Q02817 5179 aa2.16□□□□□ -2.06
SNHG1-211ENST00000539921 KRTAP4-1Q9BYQ7 146 aa2.15□□□□□ -2.07
SNHG1-211ENST00000539921 KRTAP19-5Q3LI72 72 aa2.13□□□□□ -2.07
SNHG1-211ENST00000539921 MT1XP80297 61 aa2.12□□□□□ -2.07
SNHG1-211ENST00000539921 LCE1EQ5T753 118 aa2.09□□□□□ -2.07
SNHG1-211ENST00000539921 FAT4Q6V0I7 4981 aa2.08□□□□□ -2.08
SNHG1-211ENST00000539921 KRTAP9-6A8MVA2 160 aa2.08□□□□□ -2.08
SNHG1-211ENST00000539921 LCE3EQ5T5B0 92 aa2.07□□□□□ -2.08
SNHG1-211ENST00000539921 KRTAP12-4P60329 112 aa2.04□□□□□ -2.08
SNHG1-211ENST00000539921 MT1BP07438 61 aa2.03□□□□□ -2.08
SNHG1-211ENST00000539921 MT1HP80294 61 aa2.02□□□□□ -2.09
SNHG1-211ENST00000539921 KRTAP6-3Q3LI67 103 aa2□□□□□ -2.09
SNHG1-211ENST00000539921 KRTAP5-11Q6L8G4 156 aa2□□□□□ -2.09
SNHG1-211ENST00000539921 MT2AP02795 61 aa1.97□□□□□ -2.09
SNHG1-211ENST00000539921 MT1EP04732 61 aa1.96□□□□□ -2.1
SNHG1-211ENST00000539921 MT1AP04731 61 aa1.95□□□□□ -2.1
SNHG1-211ENST00000539921 KRTAP5-6Q6L8G9 129 aaPredicted RBP1.95□□□□□ -2.1
SNHG1-211ENST00000539921 MT1FP04733 61 aa1.94□□□□□ -2.1
SNHG1-211ENST00000539921 FSIP2Q5CZC0 6907 aa1.92□□□□□ -2.1
SNHG1-211ENST00000539921 MT1LQ93083 61 aa1.92□□□□□ -2.1
SNHG1-211ENST00000539921 CRCT1Q9UGL9 99 aa1.89□□□□□ -2.11
SNHG1-211ENST00000539921 KRTAP19-7Q3SYF9 63 aa1.88□□□□□ -2.11
SNHG1-211ENST00000539921 PRM1P04553 51 aa1.84□□□□□ -2.11
SNHG1-211ENST00000539921 KRTAP5-9P26371 169 aa1.83□□□□□ -2.12
SNHG1-211ENST00000539921 USH2AO75445 5202 aa1.83□□□□□ -2.12
SNHG1-211ENST00000539921 SSPOA2VEC9 5147 aa1.81□□□□□ -2.12
SNHG1-211ENST00000539921 MACF1Q9UPN3 7388 aaKnown RBP1.8□□□□□ -2.12
SNHG1-211ENST00000539921 KRTAP5-5Q701N2 237 aaPredicted RBP1.8□□□□□ -2.12
SNHG1-211ENST00000539921 LCE3DQ9BYE3 92 aa1.79□□□□□ -2.12
SNHG1-211ENST00000539921 FCGBPQ9Y6R7 5405 aaPredicted RBP1.78□□□□□ -2.12
SNHG1-211ENST00000539921 KRTAP19-6Q3LI70 58 aa1.78□□□□□ -2.12
SNHG1-211ENST00000539921 SYNE2Q8WXH0 6885 aaKnown RBP1.76□□□□□ -2.13
SNHG1-211ENST00000539921 SPRR2FQ96RM1 72 aa1.74□□□□□ -2.13
SNHG1-211ENST00000539921 SPRR2AP35326 72 aa1.71□□□□□ -2.14
SNHG1-211ENST00000539921 MT1GP13640 62 aa1.7□□□□□ -2.14
SNHG1-211ENST00000539921 KRTAP5-4Q6L8H1 288 aa1.69□□□□□ -2.14
SNHG1-211ENST00000539921 NEBP20929 6669 aa1.68□□□□□ -2.14
SNHG1-211ENST00000539921 SPRR2BP35325 72 aa1.66□□□□□ -2.14
SNHG1-211ENST00000539921 KRTAP6-2Q3LI66 62 aa1.66□□□□□ -2.14
SNHG1-211ENST00000539921 MT1MQ8N339 61 aa1.66□□□□□ -2.14
SNHG1-211ENST00000539921 KRTAP5-1Q6L8H4 278 aa1.63□□□□□ -2.15
SNHG1-211ENST00000539921 KRTAP19-3Q7Z4W3 81 aa1.63□□□□□ -2.15
SNHG1-211ENST00000539921 SPRR2EP22531 72 aa1.61□□□□□ -2.15
SNHG1-211ENST00000539921 SPRR2DP22532 72 aa1.59□□□□□ -2.15
SNHG1-211ENST00000539921 KRTAP4-4Q9BYR3 166 aa1.59□□□□□ -2.15
SNHG1-211ENST00000539921 KMT2DO14686 5537 aa1.59□□□□□ -2.16
SNHG1-211ENST00000539921 MUC12Q9UKN1 5478 aa1.59□□□□□ -2.16
SNHG1-211ENST00000539921 MDN1Q9NU22 5596 aa1.58□□□□□ -2.16
SNHG1-211ENST00000539921 SYNE1Q8NF91 8797 aaKnown RBP1.57□□□□□ -2.16
SNHG1-211ENST00000539921 KRTAP20-1Q3LI63 56 aa1.53□□□□□ -2.16
SNHG1-211ENST00000539921 KRTAP6-1Q3LI64 71 aa1.53□□□□□ -2.16
SNHG1-211ENST00000539921 KRTAP5-2Q701N4 177 aa1.53□□□□□ -2.16
SNHG1-211ENST00000539921 KRTAP4-3Q9BYR4 195 aa1.53□□□□□ -2.16
SNHG1-211ENST00000539921 HMCN1Q96RW7 5635 aa1.51□□□□□ -2.17
SNHG1-211ENST00000539921 OBSCNQ5VST9 7968 aa1.44□□□□□ -2.18
SNHG1-211ENST00000539921 KRTAP5-8O75690 187 aa1.41□□□□□ -2.18
SNHG1-211ENST00000539921 LCE1CQ5T751 118 aa1.4□□□□□ -2.19
SNHG1-211ENST00000539921 LCE1BQ5T7P3 118 aa1.4□□□□□ -2.19
SNHG1-211ENST00000539921 DSTQ03001 7570 aaKnown RBP1.4□□□□□ -2.19
SNHG1-211ENST00000539921 GPR98Q8WXG9 6306 aa1.33□□□□□ -2.2
SNHG1-211ENST00000539921 KRTAP21-1Q3LI58 79 aa1.32□□□□□ -2.2
SNHG1-211ENST00000539921 KRTAP5-10Q6L8G5 202 aa1.28□□□□□ -2.2
SNHG1-211ENST00000539921 AHNAK2Q8IVF2 5795 aa1.26□□□□□ -2.21
SNHG1-211ENST00000539921 MT4P47944 62 aa1.25□□□□□ -2.21
SNHG1-211ENST00000539921 KRTAP20-2Q3LI61 65 aa1.22□□□□□ -2.21
SNHG1-211ENST00000539921 KRTAP5-7Q6L8G8 165 aa1.2□□□□□ -2.22
SNHG1-211ENST00000539921 MUC5ACP98088 5654 aa1.12□□□□□ -2.23
SNHG1-211ENST00000539921 MUC19Q7Z5P9 8384 aa1.11□□□□□ -2.23
SNHG1-211ENST00000539921 AHNAKQ09666 5890 aaKnown RBP1.1□□□□□ -2.23
SNHG1-211ENST00000539921 MUC5BQ9HC84 5762 aaPredicted RBP1.04□□□□□ -2.24
SNHG1-211ENST00000539921 KRTAP21-2Q3LI59 83 aa1.02□□□□□ -2.25
SNHG1-211ENST00000539921 PHGR1C9JFL3 82 aa0.73□□□□□ -2.29
SNHG1-211ENST00000539921 MUC16Q8WXI7 14507 aa0.6□□□□□ -2.31
Retrieved 77 of 20,778 RNA–protein pairs in 52.5 ms