RNA–Protein interactions for RNA: ENST00000539310.5

PLS3-209, Transcript of plastin 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PLS3, Length 3,037 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PLS3-209ENST00000539310 HMCN2Q8NDA2 5059 aa1.72□□□□□ -2.13
PLS3-209ENST00000539310 MT1FP04733 61 aa1.72□□□□□ -2.13
PLS3-209ENST00000539310 KRTAP10-5P60370 271 aa1.71□□□□□ -2.14
PLS3-209ENST00000539310 MT2AP02795 61 aa1.71□□□□□ -2.14
PLS3-209ENST00000539310 MT1XP80297 61 aa1.71□□□□□ -2.14
PLS3-209ENST00000539310 KRTAP10-7P60409 375 aaPredicted RBP1.7□□□□□ -2.14
PLS3-209ENST00000539310 LCE3CQ5T5A8 94 aa1.7□□□□□ -2.14
PLS3-209ENST00000539310 UBR4Q5T4S7 5183 aa1.69□□□□□ -2.14
PLS3-209ENST00000539310 MT1HP80294 61 aa1.69□□□□□ -2.14
PLS3-209ENST00000539310 KRTAP19-8Q3LI54 63 aa1.68□□□□□ -2.14
PLS3-209ENST00000539310 MT1BP07438 61 aa1.67□□□□□ -2.14
PLS3-209ENST00000539310 RNF213Q63HN8 5207 aa1.67□□□□□ -2.14
PLS3-209ENST00000539310 KRTAP5-9P26371 169 aa1.66□□□□□ -2.14
PLS3-209ENST00000539310 KRTAP19-5Q3LI72 72 aa1.66□□□□□ -2.14
PLS3-209ENST00000539310 KRTAP9-6A8MVA2 160 aa1.62□□□□□ -2.15
PLS3-209ENST00000539310 KMT2DO14686 5537 aa1.61□□□□□ -2.15
PLS3-209ENST00000539310 KRTAP2-3P0C7H8 128 aa1.59□□□□□ -2.15
PLS3-209ENST00000539310 KRTAP2-4Q9BYR9 128 aa1.59□□□□□ -2.15
PLS3-209ENST00000539310 KRTAP2-1Q9BYU5 128 aa1.59□□□□□ -2.15
PLS3-209ENST00000539310 KRTAP5-11Q6L8G4 156 aa1.58□□□□□ -2.16
PLS3-209ENST00000539310 LCE3EQ5T5B0 92 aa1.57□□□□□ -2.16
PLS3-209ENST00000539310 CRCT1Q9UGL9 99 aa1.57□□□□□ -2.16
PLS3-209ENST00000539310 USH2AO75445 5202 aa1.57□□□□□ -2.16
PLS3-209ENST00000539310 KRTAP5-4Q6L8H1 288 aa1.56□□□□□ -2.16
PLS3-209ENST00000539310 KRTAP5-1Q6L8H4 278 aa1.56□□□□□ -2.16
PLS3-209ENST00000539310 KRTAP4-4Q9BYR3 166 aa1.56□□□□□ -2.16
PLS3-209ENST00000539310 GPR98Q8WXG9 6306 aa1.55□□□□□ -2.16
PLS3-209ENST00000539310 KRTAP12-4P60329 112 aa1.53□□□□□ -2.17
PLS3-209ENST00000539310 KRTAP19-7Q3SYF9 63 aa1.52□□□□□ -2.17
PLS3-209ENST00000539310 KRTAP6-3Q3LI67 103 aa1.51□□□□□ -2.17
PLS3-209ENST00000539310 MT1LQ93083 61 aa1.49□□□□□ -2.17
PLS3-209ENST00000539310 OBSCNQ5VST9 7968 aa1.49□□□□□ -2.17
PLS3-209ENST00000539310 MT1EP04732 61 aa1.46□□□□□ -2.18
PLS3-209ENST00000539310 LCE1EQ5T753 118 aa1.46□□□□□ -2.18
PLS3-209ENST00000539310 MT1GP13640 62 aa1.45□□□□□ -2.18
PLS3-209ENST00000539310 SSPOA2VEC9 5147 aa1.44□□□□□ -2.18
PLS3-209ENST00000539310 KRTAP4-3Q9BYR4 195 aa1.44□□□□□ -2.18
PLS3-209ENST00000539310 KRTAP20-1Q3LI63 56 aa1.44□□□□□ -2.18
PLS3-209ENST00000539310 FCGBPQ9Y6R7 5405 aaPredicted RBP1.43□□□□□ -2.18
PLS3-209ENST00000539310 DSTQ03001 7570 aaKnown RBP1.42□□□□□ -2.18
PLS3-209ENST00000539310 KRTAP5-2Q701N4 177 aa1.4□□□□□ -2.19
PLS3-209ENST00000539310 SYNE1Q8NF91 8797 aaKnown RBP1.39□□□□□ -2.19
PLS3-209ENST00000539310 FSIP2Q5CZC0 6907 aa1.38□□□□□ -2.19
PLS3-209ENST00000539310 MUC12Q9UKN1 5478 aa1.37□□□□□ -2.19
PLS3-209ENST00000539310 MT1MQ8N339 61 aa1.36□□□□□ -2.19
PLS3-209ENST00000539310 KRTAP5-8O75690 187 aa1.36□□□□□ -2.19
PLS3-209ENST00000539310 PRM1P04553 51 aa1.36□□□□□ -2.19
PLS3-209ENST00000539310 KRTAP19-6Q3LI70 58 aa1.35□□□□□ -2.19
PLS3-209ENST00000539310 KRTAP19-3Q7Z4W3 81 aa1.35□□□□□ -2.19
PLS3-209ENST00000539310 LCE3DQ9BYE3 92 aa1.35□□□□□ -2.19
PLS3-209ENST00000539310 NEBP20929 6669 aa1.32□□□□□ -2.2
PLS3-209ENST00000539310 MT1AP04731 61 aa1.31□□□□□ -2.2
PLS3-209ENST00000539310 KRTAP5-7Q6L8G8 165 aa1.29□□□□□ -2.2
PLS3-209ENST00000539310 KRTAP6-1Q3LI64 71 aa1.28□□□□□ -2.2
PLS3-209ENST00000539310 KRTAP5-5Q701N2 237 aaPredicted RBP1.28□□□□□ -2.2
PLS3-209ENST00000539310 SPRR2FQ96RM1 72 aa1.28□□□□□ -2.2
PLS3-209ENST00000539310 AHNAKQ09666 5890 aaKnown RBP1.28□□□□□ -2.21
PLS3-209ENST00000539310 KRTAP6-2Q3LI66 62 aa1.25□□□□□ -2.21
PLS3-209ENST00000539310 SYNE2Q8WXH0 6885 aaKnown RBP1.24□□□□□ -2.21
PLS3-209ENST00000539310 KRTAP5-10Q6L8G5 202 aa1.18□□□□□ -2.22
PLS3-209ENST00000539310 MDN1Q9NU22 5596 aa1.17□□□□□ -2.22
PLS3-209ENST00000539310 AHNAK2Q8IVF2 5795 aa1.14□□□□□ -2.23
PLS3-209ENST00000539310 MACF1Q9UPN3 7388 aaKnown RBP1.14□□□□□ -2.23
PLS3-209ENST00000539310 SPRR2AP35326 72 aa1.11□□□□□ -2.23
PLS3-209ENST00000539310 SPRR2EP22531 72 aa1.1□□□□□ -2.23
PLS3-209ENST00000539310 SPRR2BP35325 72 aa1.1□□□□□ -2.23
PLS3-209ENST00000539310 MUC19Q7Z5P9 8384 aa1.06□□□□□ -2.24
PLS3-209ENST00000539310 SPRR2DP22532 72 aa1.05□□□□□ -2.24
PLS3-209ENST00000539310 MUC5ACP98088 5654 aa1.02□□□□□ -2.25
PLS3-209ENST00000539310 LCE1CQ5T751 118 aa0.99□□□□□ -2.25
PLS3-209ENST00000539310 LCE1BQ5T7P3 118 aa0.99□□□□□ -2.25
PLS3-209ENST00000539310 MT4P47944 62 aa0.96□□□□□ -2.26
PLS3-209ENST00000539310 KRTAP21-1Q3LI58 79 aa0.91□□□□□ -2.26
PLS3-209ENST00000539310 KRTAP20-2Q3LI61 65 aa0.9□□□□□ -2.27
PLS3-209ENST00000539310 KRTAP21-2Q3LI59 83 aa0.79□□□□□ -2.28
PLS3-209ENST00000539310 PHGR1C9JFL3 82 aa0.64□□□□□ -2.31
PLS3-209ENST00000539310 MUC16Q8WXI7 14507 aa0.53□□□□□ -2.32
Retrieved 77 of 20,778 RNA–protein pairs in 81.3 ms