RNA–Protein interactions for RNA: ENST00000538970.5

VAMP1-206, Transcript of vesicle associated membrane protein 1, humanhuman

TSL 1 (best)

Gene VAMP1, Length 567 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VAMP1-206ENST00000538970 LCE3AQ5TA76 89 aa4.35□□□□□ -1.71
VAMP1-206ENST00000538970 C10orf95Q9H7T3 257 aa4.35□□□□□ -1.71
VAMP1-206ENST00000538970 SMIM26A0A096LP01 95 aa4.32□□□□□ -1.72
VAMP1-206ENST00000538970 A8MU10 97 aa4.31□□□□□ -1.72
VAMP1-206ENST00000538970 COX7CP15954 63 aa4.31□□□□□ -1.72
VAMP1-206ENST00000538970 H7BZZ5 65 aa4.3□□□□□ -1.72
VAMP1-206ENST00000538970 A0A1B0GU69 56 aa4.29□□□□□ -1.72
VAMP1-206ENST00000538970 TNP1P09430 55 aa4.29□□□□□ -1.72
VAMP1-206ENST00000538970 KRTAP4-7Q9BYR0 210 aa4.22□□□□□ -1.73
VAMP1-206ENST00000538970 KRTAP12-3P60328 96 aa4.18□□□□□ -1.74
VAMP1-206ENST00000538970 KRTAP20-2Q3LI61 65 aa4.18□□□□□ -1.74
VAMP1-206ENST00000538970 KRTAP5-5Q701N2 237 aaPredicted RBP4.13□□□□□ -1.75
VAMP1-206ENST00000538970 PRR15LQ9BU68 103 aa4.1□□□□□ -1.75
VAMP1-206ENST00000538970 AHNAKQ09666 5890 aaKnown RBP4.05□□□□□ -1.76
VAMP1-206ENST00000538970 SYNE1Q8NF91 8797 aaKnown RBP4.04□□□□□ -1.76
VAMP1-206ENST00000538970 MUC5ACP98088 5654 aa4.03□□□□□ -1.76
VAMP1-206ENST00000538970 KRTAP12-4P60329 112 aa4.03□□□□□ -1.76
VAMP1-206ENST00000538970 ANAPC13Q9BS18 74 aa4.03□□□□□ -1.76
VAMP1-206ENST00000538970 LINC01558Q9Y6Z2 57 aa4.03□□□□□ -1.76
VAMP1-206ENST00000538970 LOC100996750A0A140TA64 210 aa4□□□□□ -1.77
VAMP1-206ENST00000538970 ATP5EP56381 51 aaPredicted RBP4□□□□□ -1.77
VAMP1-206ENST00000538970 CCDC179H3BU77 68 aa3.98□□□□□ -1.77
VAMP1-206ENST00000538970 KRTAP25-1Q3LHN0 102 aa3.97□□□□□ -1.77
VAMP1-206ENST00000538970 V9GYY9 64 aa3.97□□□□□ -1.77
VAMP1-206ENST00000538970 UQCR11O14957 56 aa3.96□□□□□ -1.78
VAMP1-206ENST00000538970 KRTAP4-11Q9BYQ6 195 aa3.96□□□□□ -1.78
VAMP1-206ENST00000538970 MUC5BQ9HC84 5762 aaPredicted RBP3.95□□□□□ -1.78
VAMP1-206ENST00000538970 KRTAP19-4Q3LI73 84 aa3.91□□□□□ -1.78
VAMP1-206ENST00000538970 KRTAP5-8O75690 187 aa3.9□□□□□ -1.79
VAMP1-206ENST00000538970 MIR22HGQ0VDD5 57 aa3.86□□□□□ -1.79
VAMP1-206ENST00000538970 KRTAP15-1Q3LI76 137 aa3.84□□□□□ -1.79
VAMP1-206ENST00000538970 LCE3CQ5T5A8 94 aa3.83□□□□□ -1.8
VAMP1-206ENST00000538970 TMEM258P61165 79 aa3.82□□□□□ -1.8
VAMP1-206ENST00000538970 PRO0628Q9UI54 55 aa3.81□□□□□ -1.8
VAMP1-206ENST00000538970 KRTAP23-1A1A580 65 aa3.8□□□□□ -1.8
VAMP1-206ENST00000538970 K7ERS5 55 aa3.8□□□□□ -1.8
VAMP1-206ENST00000538970 KRTAP5-2Q701N4 177 aa3.8□□□□□ -1.8
VAMP1-206ENST00000538970 MT1AP04731 61 aa3.78□□□□□ -1.8
VAMP1-206ENST00000538970 KRTAP6-1Q3LI64 71 aa3.77□□□□□ -1.81
VAMP1-206ENST00000538970 RPS28P62857 69 aaKnown RBP3.76□□□□□ -1.81
VAMP1-206ENST00000538970 H3BS24 57 aa3.74□□□□□ -1.81
VAMP1-206ENST00000538970 A0A0A0MQY5 61 aa3.72□□□□□ -1.81
VAMP1-206ENST00000538970 KRTAP9-9Q9BYP9 154 aa3.71□□□□□ -1.82
VAMP1-206ENST00000538970 OBSCNQ5VST9 7968 aa3.69□□□□□ -1.82
VAMP1-206ENST00000538970 PSPHP1O15172 72 aa3.68□□□□□ -1.82
VAMP1-206ENST00000538970 KRTAP9-4Q9BYQ2 154 aa3.66□□□□□ -1.82
VAMP1-206ENST00000538970 KRTAP9-6A8MVA2 160 aa3.64□□□□□ -1.83
VAMP1-206ENST00000538970 PMAIP1Q13794 54 aa3.64□□□□□ -1.83
VAMP1-206ENST00000538970 KRTAP6-2Q3LI66 62 aa3.63□□□□□ -1.83
VAMP1-206ENST00000538970 Q1T7F1 81 aa3.61□□□□□ -1.83
VAMP1-206ENST00000538970 CDC42SE1Q9NRR8 79 aa3.59□□□□□ -1.83
VAMP1-206ENST00000538970 A6NED7 52 aa3.53□□□□□ -1.84
VAMP1-206ENST00000538970 ROMO1P60602 79 aa3.52□□□□□ -1.85
VAMP1-206ENST00000538970 KRTAP5-1Q6L8H4 278 aa3.47□□□□□ -1.85
VAMP1-206ENST00000538970 MT3P25713 68 aa3.45□□□□□ -1.86
VAMP1-206ENST00000538970 KTN1-AS1Q86SY8 53 aa3.42□□□□□ -1.86
VAMP1-206ENST00000538970 BRK1Q8WUW1 75 aa3.4□□□□□ -1.87
VAMP1-206ENST00000538970 LCE1EQ5T753 118 aa3.22□□□□□ -1.89
VAMP1-206ENST00000538970 PRAC1Q96KF2 57 aa3.08□□□□□ -1.92
VAMP1-206ENST00000538970 KRTAP4-2Q9BYR5 136 aa3.08□□□□□ -1.92
VAMP1-206ENST00000538970 LUZP6Q538Z0 58 aa3.04□□□□□ -1.92
VAMP1-206ENST00000538970 LCE1BQ5T7P3 118 aa3.04□□□□□ -1.92
VAMP1-206ENST00000538970 LCE1CQ5T751 118 aa2.99□□□□□ -1.93
VAMP1-206ENST00000538970 KRTAP4-12Q9BQ66 201 aa2.98□□□□□ -1.93
VAMP1-206ENST00000538970 PHGR1C9JFL3 82 aa2.78□□□□□ -1.96
VAMP1-206ENST00000538970 KRTAP5-11Q6L8G4 156 aa2.78□□□□□ -1.96
VAMP1-206ENST00000538970 NDUFAF8A1L188 74 aa2.73□□□□□ -1.97
VAMP1-206ENST00000538970 KRTAP5-6Q6L8G9 129 aaPredicted RBP2.71□□□□□ -1.98
VAMP1-206ENST00000538970 LCE3DQ9BYE3 92 aa2.71□□□□□ -1.98
VAMP1-206ENST00000538970 LCE1FQ5T754 118 aa2.68□□□□□ -1.98
VAMP1-206ENST00000538970 LCE3EQ5T5B0 92 aa2.52□□□□□ -2.01
VAMP1-206ENST00000538970 KRTAP21-2Q3LI59 83 aa2.49□□□□□ -2.01
VAMP1-206ENST00000538970 INE1O15225 51 aa2.48□□□□□ -2.01
VAMP1-206ENST00000538970 MUC19Q7Z5P9 8384 aa2.3□□□□□ -2.04
VAMP1-206ENST00000538970 KRTAP4-4Q9BYR3 166 aa2.29□□□□□ -2.04
VAMP1-206ENST00000538970 KRTAP21-1Q3LI58 79 aa2.08□□□□□ -2.08
VAMP1-206ENST00000538970 PRM1P04553 51 aa1.79□□□□□ -2.12
VAMP1-206ENST00000538970 MUC16Q8WXI7 14507 aa1.57□□□□□ -2.16
Retrieved 78 of 20,778 RNA–protein pairs in 96.3 ms