RNA–Protein interactions for RNA: ENST00000538744.5

DDX55-205, Transcript of DEAD-box helicase 55, humanhuman

TSL 5 BASIC

Gene DDX55, Length 1,735 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX55-205ENST00000538744 MT1GP13640 62 aa6.94□□□□□ -1.3
DDX55-205ENST00000538744 KRTAP9-6A8MVA2 160 aa6.92□□□□□ -1.3
DDX55-205ENST00000538744 MT1MQ8N339 61 aa6.88□□□□□ -1.31
DDX55-205ENST00000538744 MACF1Q9UPN3 7388 aaKnown RBP6.84□□□□□ -1.32
DDX55-205ENST00000538744 LCE5AQ5TCM9 118 aa6.81□□□□□ -1.32
DDX55-205ENST00000538744 KRTAP5-9P26371 169 aa6.8□□□□□ -1.32
DDX55-205ENST00000538744 MUC12Q9UKN1 5478 aa6.79□□□□□ -1.32
DDX55-205ENST00000538744 KRTAP4-3Q9BYR4 195 aa6.78□□□□□ -1.32
DDX55-205ENST00000538744 A0A0A0MQY5 61 aa6.7□□□□□ -1.34
DDX55-205ENST00000538744 KRTAP9-6A0A140TA67 174 aa6.66□□□□□ -1.34
DDX55-205ENST00000538744 LCE1AQ5T7P2 110 aa6.64□□□□□ -1.35
DDX55-205ENST00000538744 KRTAP9-1A8MXZ3 250 aaPredicted RBP6.61□□□□□ -1.35
DDX55-205ENST00000538744 LOC100996750A0A140TA64 210 aa6.6□□□□□ -1.35
DDX55-205ENST00000538744 SPRR2EP22531 72 aa6.56□□□□□ -1.36
DDX55-205ENST00000538744 SPRR2BP35325 72 aa6.56□□□□□ -1.36
DDX55-205ENST00000538744 SPRR2AP35326 72 aa6.56□□□□□ -1.36
DDX55-205ENST00000538744 KRTAP6-3Q3LI67 103 aa6.55□□□□□ -1.36
DDX55-205ENST00000538744 SYNE2Q8WXH0 6885 aaKnown RBP6.54□□□□□ -1.36
DDX55-205ENST00000538744 KRTAP2-3P0C7H8 128 aa6.51□□□□□ -1.37
DDX55-205ENST00000538744 KRTAP2-4Q9BYR9 128 aa6.51□□□□□ -1.37
DDX55-205ENST00000538744 KRTAP2-1Q9BYU5 128 aa6.51□□□□□ -1.37
DDX55-205ENST00000538744 MDN1Q9NU22 5596 aa6.38□□□□□ -1.39
DDX55-205ENST00000538744 SPRR2DP22532 72 aa6.31□□□□□ -1.4
DDX55-205ENST00000538744 KRTAP4-6Q9BYQ5 205 aa6.31□□□□□ -1.4
DDX55-205ENST00000538744 DSTQ03001 7570 aaKnown RBP6.24□□□□□ -1.41
DDX55-205ENST00000538744 INE1O15225 51 aa6.22□□□□□ -1.41
DDX55-205ENST00000538744 KRTAP5-5Q701N2 237 aaPredicted RBP6.16□□□□□ -1.42
DDX55-205ENST00000538744 KRTAP9-7A8MTY7 169 aa6.14□□□□□ -1.43
DDX55-205ENST00000538744 MT1AP04731 61 aa6.13□□□□□ -1.43
DDX55-205ENST00000538744 KRTAP6-1Q3LI64 71 aa6.08□□□□□ -1.44
DDX55-205ENST00000538744 LCE3BQ5TA77 95 aa6.03□□□□□ -1.44
DDX55-205ENST00000538744 NEBP20929 6669 aa5.86□□□□□ -1.47
DDX55-205ENST00000538744 KRTAP9-4Q9BYQ2 154 aa5.8□□□□□ -1.48
DDX55-205ENST00000538744 KRTAP5-4Q6L8H1 288 aa5.75□□□□□ -1.49
DDX55-205ENST00000538744 SYNE1Q8NF91 8797 aaKnown RBP5.72□□□□□ -1.49
DDX55-205ENST00000538744 KRTAP4-9Q9BYQ8 210 aa5.7□□□□□ -1.5
DDX55-205ENST00000538744 KRTAP12-4P60329 112 aa5.66□□□□□ -1.5
DDX55-205ENST00000538744 LCE4AQ5TA78 99 aa5.59□□□□□ -1.51
DDX55-205ENST00000538744 KRTAP4-12Q9BQ66 201 aa5.59□□□□□ -1.51
DDX55-205ENST00000538744 KRTAP2-2Q9BYT5 123 aa5.57□□□□□ -1.52
DDX55-205ENST00000538744 KRTAP6-2Q3LI66 62 aa5.56□□□□□ -1.52
DDX55-205ENST00000538744 MT3P25713 68 aa5.54□□□□□ -1.52
DDX55-205ENST00000538744 LCE3DQ9BYE3 92 aa5.53□□□□□ -1.52
DDX55-205ENST00000538744 KRTAP20-1Q3LI63 56 aa5.48□□□□□ -1.53
DDX55-205ENST00000538744 MT4P47944 62 aa5.48□□□□□ -1.53
DDX55-205ENST00000538744 KRTAP9-9Q9BYP9 154 aa5.43□□□□□ -1.54
DDX55-205ENST00000538744 LCE3EQ5T5B0 92 aa5.41□□□□□ -1.54
DDX55-205ENST00000538744 KRTAP20-2Q3LI61 65 aa5.37□□□□□ -1.55
DDX55-205ENST00000538744 LCE1DQ5T752 114 aa5.32□□□□□ -1.56
DDX55-205ENST00000538744 KRTAP5-2Q701N4 177 aa5.27□□□□□ -1.57
DDX55-205ENST00000538744 HMCN1Q96RW7 5635 aa5.15□□□□□ -1.58
DDX55-205ENST00000538744 KRTAP5-3Q6L8H2 238 aa5.15□□□□□ -1.58
DDX55-205ENST00000538744 KRTAP4-2Q9BYR5 136 aa4.92□□□□□ -1.62
DDX55-205ENST00000538744 OBSCNQ5VST9 7968 aa4.92□□□□□ -1.62
DDX55-205ENST00000538744 KRTAP4-11Q9BYQ6 195 aa4.86□□□□□ -1.63
DDX55-205ENST00000538744 PRM1P04553 51 aa4.86□□□□□ -1.63
DDX55-205ENST00000538744 LCE1EQ5T753 118 aa4.73□□□□□ -1.65
DDX55-205ENST00000538744 KRTAP5-1Q6L8H4 278 aa4.51□□□□□ -1.69
DDX55-205ENST00000538744 LCE1BQ5T7P3 118 aa4.48□□□□□ -1.69
DDX55-205ENST00000538744 KRTAP5-10Q6L8G5 202 aa4.46□□□□□ -1.69
DDX55-205ENST00000538744 LCE1CQ5T751 118 aa4.41□□□□□ -1.7
DDX55-205ENST00000538744 MUC5ACP98088 5654 aa4.41□□□□□ -1.7
DDX55-205ENST00000538744 AHNAK2Q8IVF2 5795 aa4.41□□□□□ -1.7
DDX55-205ENST00000538744 KRTAP5-8O75690 187 aa4.41□□□□□ -1.7
DDX55-205ENST00000538744 KRTAP5-7Q6L8G8 165 aa4.32□□□□□ -1.72
DDX55-205ENST00000538744 KRTAP5-6Q6L8G9 129 aaPredicted RBP4.15□□□□□ -1.74
DDX55-205ENST00000538744 KRTAP21-2Q3LI59 83 aa3.97□□□□□ -1.77
DDX55-205ENST00000538744 KRTAP5-11Q6L8G4 156 aa3.87□□□□□ -1.79
DDX55-205ENST00000538744 GPR98Q8WXG9 6306 aa3.78□□□□□ -1.8
DDX55-205ENST00000538744 MUC5BQ9HC84 5762 aaPredicted RBP3.67□□□□□ -1.82
DDX55-205ENST00000538744 KRTAP4-4Q9BYR3 166 aa3.53□□□□□ -1.84
DDX55-205ENST00000538744 LCE1FQ5T754 118 aa3.41□□□□□ -1.86
DDX55-205ENST00000538744 PHGR1C9JFL3 82 aa3.32□□□□□ -1.88
DDX55-205ENST00000538744 AHNAKQ09666 5890 aaKnown RBP3.16□□□□□ -1.9
DDX55-205ENST00000538744 KRTAP21-1Q3LI58 79 aa3.01□□□□□ -1.93
DDX55-205ENST00000538744 MUC19Q7Z5P9 8384 aa2.9□□□□□ -1.95
DDX55-205ENST00000538744 MUC16Q8WXI7 14507 aa2.16□□□□□ -2.06
Retrieved 77 of 20,778 RNA–protein pairs in 13.1 ms