RNA–Protein interactions for RNA: ENST00000538653.1

BCAR3-209, Transcript of BCAR3, NSP family adaptor protein, humanhuman

TSL 2

Gene BCAR3, Length 900 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BCAR3-209ENST00000538653 LINC01558Q9Y6Z2 57 aa2.71□□□□□ -1.98
BCAR3-209ENST00000538653 MACF1Q9UPN3 7388 aaKnown RBP2.7□□□□□ -1.98
BCAR3-209ENST00000538653 MT1XP80297 61 aa2.68□□□□□ -1.98
BCAR3-209ENST00000538653 NDUFAF8A1L188 74 aa2.67□□□□□ -1.98
BCAR3-209ENST00000538653 SPATA8Q6RVD6 105 aa2.67□□□□□ -1.98
BCAR3-209ENST00000538653 A0A0D9SG42 100 aa2.65□□□□□ -1.99
BCAR3-209ENST00000538653 UQCR11O14957 56 aa2.64□□□□□ -1.99
BCAR3-209ENST00000538653 Q1T7F1 81 aa2.64□□□□□ -1.99
BCAR3-209ENST00000538653 CAMK2N1Q7Z7J9 78 aa2.64□□□□□ -1.99
BCAR3-209ENST00000538653 KMT2DO14686 5537 aa2.63□□□□□ -1.99
BCAR3-209ENST00000538653 KRTAP12-1P59990 96 aa2.62□□□□□ -1.99
BCAR3-209ENST00000538653 KRTAP12-2P59991 146 aa2.61□□□□□ -1.99
BCAR3-209ENST00000538653 SPINT4Q6UDR6 99 aa2.61□□□□□ -1.99
BCAR3-209ENST00000538653 SYNE2Q8WXH0 6885 aaKnown RBP2.61□□□□□ -1.99
BCAR3-209ENST00000538653 A8MU10 97 aa2.6□□□□□ -1.99
BCAR3-209ENST00000538653 PRAC1Q96KF2 57 aa2.6□□□□□ -1.99
BCAR3-209ENST00000538653 MUC12Q9UKN1 5478 aa2.59□□□□□ -1.99
BCAR3-209ENST00000538653 KRTAP6-3Q3LI67 103 aa2.58□□□□□ -2
BCAR3-209ENST00000538653 MIR22HGQ0VDD5 57 aa2.57□□□□□ -2
BCAR3-209ENST00000538653 LCE3EQ5T5B0 92 aa2.57□□□□□ -2
BCAR3-209ENST00000538653 MDN1Q9NU22 5596 aa2.55□□□□□ -2
BCAR3-209ENST00000538653 A6NED7 52 aa2.54□□□□□ -2
BCAR3-209ENST00000538653 K7ERS5 55 aa2.53□□□□□ -2
BCAR3-209ENST00000538653 KRTAP8-1Q8IUC2 63 aa2.52□□□□□ -2.01
BCAR3-209ENST00000538653 KRTAP5-5Q701N2 237 aaPredicted RBP2.5□□□□□ -2.01
BCAR3-209ENST00000538653 LUZP6Q538Z0 58 aa2.48□□□□□ -2.01
BCAR3-209ENST00000538653 TNP1P09430 55 aa2.47□□□□□ -2.01
BCAR3-209ENST00000538653 SPRR2FQ96RM1 72 aa2.47□□□□□ -2.01
BCAR3-209ENST00000538653 C10orf95Q9H7T3 257 aa2.47□□□□□ -2.01
BCAR3-209ENST00000538653 NEBP20929 6669 aa2.47□□□□□ -2.01
BCAR3-209ENST00000538653 CDC42SE1Q9NRR8 79 aa2.46□□□□□ -2.02
BCAR3-209ENST00000538653 KRTAP25-1Q3LHN0 102 aa2.42□□□□□ -2.02
BCAR3-209ENST00000538653 SPRR2EP22531 72 aa2.4□□□□□ -2.03
BCAR3-209ENST00000538653 SPRR2BP35325 72 aa2.4□□□□□ -2.03
BCAR3-209ENST00000538653 SPRR2AP35326 72 aa2.4□□□□□ -2.03
BCAR3-209ENST00000538653 ROMO1P60602 79 aa2.39□□□□□ -2.03
BCAR3-209ENST00000538653 LCE1CQ5T751 118 aa2.39□□□□□ -2.03
BCAR3-209ENST00000538653 LCE1BQ5T7P3 118 aa2.39□□□□□ -2.03
BCAR3-209ENST00000538653 KRTAP19-7Q3SYF9 63 aa2.38□□□□□ -2.03
BCAR3-209ENST00000538653 MT1EP04732 61 aa2.37□□□□□ -2.03
BCAR3-209ENST00000538653 KRTAP19-5Q3LI72 72 aa2.36□□□□□ -2.03
BCAR3-209ENST00000538653 KRTAP5-8O75690 187 aa2.34□□□□□ -2.03
BCAR3-209ENST00000538653 SPRR2DP22532 72 aa2.33□□□□□ -2.04
BCAR3-209ENST00000538653 KRTAP19-3Q7Z4W3 81 aa2.33□□□□□ -2.04
BCAR3-209ENST00000538653 KRTAP20-1Q3LI63 56 aa2.32□□□□□ -2.04
BCAR3-209ENST00000538653 KRTAP12-3P60328 96 aa2.31□□□□□ -2.04
BCAR3-209ENST00000538653 KRTAP2-3P0C7H8 128 aa2.3□□□□□ -2.04
BCAR3-209ENST00000538653 PP632Q6XCG6 107 aa2.3□□□□□ -2.04
BCAR3-209ENST00000538653 KRTAP2-4Q9BYR9 128 aa2.3□□□□□ -2.04
BCAR3-209ENST00000538653 MT1GP13640 62 aa2.29□□□□□ -2.04
BCAR3-209ENST00000538653 MT1LQ93083 61 aa2.28□□□□□ -2.04
BCAR3-209ENST00000538653 MT1MQ8N339 61 aa2.24□□□□□ -2.05
BCAR3-209ENST00000538653 KRTAP2-1Q9BYU5 128 aa2.23□□□□□ -2.05
BCAR3-209ENST00000538653 DSTQ03001 7570 aaKnown RBP2.22□□□□□ -2.05
BCAR3-209ENST00000538653 HMCN1Q96RW7 5635 aa2.08□□□□□ -2.08
BCAR3-209ENST00000538653 MUC19Q7Z5P9 8384 aa2.02□□□□□ -2.09
BCAR3-209ENST00000538653 MT4P47944 62 aa2□□□□□ -2.09
BCAR3-209ENST00000538653 KRTAP12-4P60329 112 aa1.97□□□□□ -2.09
BCAR3-209ENST00000538653 SPRR5A0A1B0GTR4 108 aa1.96□□□□□ -2.1
BCAR3-209ENST00000538653 LCE3DQ9BYE3 92 aa1.96□□□□□ -2.1
BCAR3-209ENST00000538653 AHNAK2Q8IVF2 5795 aa1.96□□□□□ -2.1
BCAR3-209ENST00000538653 MT1AP04731 61 aa1.95□□□□□ -2.1
BCAR3-209ENST00000538653 KRTAP5-7Q6L8G8 165 aa1.95□□□□□ -2.1
BCAR3-209ENST00000538653 SYNE1Q8NF91 8797 aaKnown RBP1.94□□□□□ -2.1
BCAR3-209ENST00000538653 KRTAP20-2Q3LI61 65 aa1.93□□□□□ -2.1
BCAR3-209ENST00000538653 INE1O15225 51 aa1.92□□□□□ -2.1
BCAR3-209ENST00000538653 KRTAP6-1Q3LI64 71 aa1.91□□□□□ -2.1
BCAR3-209ENST00000538653 GPR98Q8WXG9 6306 aa1.88□□□□□ -2.11
BCAR3-209ENST00000538653 KRTAP5-10Q6L8G5 202 aa1.81□□□□□ -2.12
BCAR3-209ENST00000538653 KRTAP6-2Q3LI66 62 aa1.8□□□□□ -2.12
BCAR3-209ENST00000538653 KRTAP21-2Q3LI59 83 aa1.73□□□□□ -2.13
BCAR3-209ENST00000538653 MUC5ACP98088 5654 aa1.69□□□□□ -2.14
BCAR3-209ENST00000538653 MUC5BQ9HC84 5762 aaPredicted RBP1.59□□□□□ -2.15
BCAR3-209ENST00000538653 AHNAKQ09666 5890 aaKnown RBP1.58□□□□□ -2.16
BCAR3-209ENST00000538653 PRM1P04553 51 aa1.2□□□□□ -2.22
BCAR3-209ENST00000538653 PHGR1C9JFL3 82 aa1.15□□□□□ -2.23
BCAR3-209ENST00000538653 KRTAP21-1Q3LI58 79 aa0.81□□□□□ -2.28
BCAR3-209ENST00000538653 MUC16Q8WXI7 14507 aa0.8□□□□□ -2.28
Retrieved 78 of 20,778 RNA–protein pairs in 52.3 ms