RNA–Protein interactions for RNA: ENST00000538470.2

DDB1-212, Transcript of damage specific DNA binding protein 1, humanhuman

TSL 2

Gene DDB1, Length 858 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDB1-212ENST00000538470 KRTAP19-7Q3SYF9 63 aa3.25□□□□□ -1.89
DDB1-212ENST00000538470 MT1EP04732 61 aa3.24□□□□□ -1.89
DDB1-212ENST00000538470 KRTAP12-1P59990 96 aa3.24□□□□□ -1.89
DDB1-212ENST00000538470 LCE1DQ5T752 114 aa3.24□□□□□ -1.89
DDB1-212ENST00000538470 KRTAP19-3Q7Z4W3 81 aa3.24□□□□□ -1.89
DDB1-212ENST00000538470 UQCR11O14957 56 aa3.17□□□□□ -1.9
DDB1-212ENST00000538470 PSPHP1O15172 72 aa3.17□□□□□ -1.9
DDB1-212ENST00000538470 MT1GP13640 62 aa3.15□□□□□ -1.91
DDB1-212ENST00000538470 PP632Q6XCG6 107 aa3.15□□□□□ -1.91
DDB1-212ENST00000538470 KRTAP4-9Q9BYQ8 210 aa3.15□□□□□ -1.91
DDB1-212ENST00000538470 V9GYY9 64 aa3.15□□□□□ -1.91
DDB1-212ENST00000538470 MIR22HGQ0VDD5 57 aa3.13□□□□□ -1.91
DDB1-212ENST00000538470 Q1T7F1 81 aa3.13□□□□□ -1.91
DDB1-212ENST00000538470 KRTAP19-5Q3LI72 72 aa3.13□□□□□ -1.91
DDB1-212ENST00000538470 KRTAP4-7Q9BYR0 210 aa3.11□□□□□ -1.91
DDB1-212ENST00000538470 MT1MQ8N339 61 aa3.09□□□□□ -1.91
DDB1-212ENST00000538470 C10orf95Q9H7T3 257 aa3.09□□□□□ -1.91
DDB1-212ENST00000538470 HMCN1Q96RW7 5635 aa3.09□□□□□ -1.92
DDB1-212ENST00000538470 MT1LQ93083 61 aa3.08□□□□□ -1.92
DDB1-212ENST00000538470 KRTAP4-11Q9BYQ6 195 aa3.08□□□□□ -1.92
DDB1-212ENST00000538470 A6NED7 52 aa3.07□□□□□ -1.92
DDB1-212ENST00000538470 TNP1P09430 55 aa3.06□□□□□ -1.92
DDB1-212ENST00000538470 RPS28P62857 69 aaKnown RBP3.06□□□□□ -1.92
DDB1-212ENST00000538470 K7ERS5 55 aa3.04□□□□□ -1.92
DDB1-212ENST00000538470 MT4P47944 62 aa3.04□□□□□ -1.92
DDB1-212ENST00000538470 AHNAK2Q8IVF2 5795 aa3.02□□□□□ -1.93
DDB1-212ENST00000538470 LCE3AQ5TA76 89 aa3.02□□□□□ -1.93
DDB1-212ENST00000538470 KRTAP5-4Q6L8H1 288 aa3.02□□□□□ -1.93
DDB1-212ENST00000538470 KRTAP4-2Q9BYR5 136 aa3.01□□□□□ -1.93
DDB1-212ENST00000538470 KRTAP4-3Q9BYR4 195 aa2.97□□□□□ -1.93
DDB1-212ENST00000538470 KRTAP25-1Q3LHN0 102 aa2.94□□□□□ -1.94
DDB1-212ENST00000538470 KRTAP5-10Q6L8G5 202 aa2.94□□□□□ -1.94
DDB1-212ENST00000538470 PRAC1Q96KF2 57 aa2.94□□□□□ -1.94
DDB1-212ENST00000538470 CDC42SE1Q9NRR8 79 aa2.92□□□□□ -1.94
DDB1-212ENST00000538470 KRTAP12-3P60328 96 aa2.91□□□□□ -1.94
DDB1-212ENST00000538470 ROMO1P60602 79 aa2.86□□□□□ -1.95
DDB1-212ENST00000538470 KRTAP5-7Q6L8G8 165 aa2.86□□□□□ -1.95
DDB1-212ENST00000538470 KRTAP5-3Q6L8H2 238 aa2.85□□□□□ -1.95
DDB1-212ENST00000538470 KRTAP5-5Q701N2 237 aaPredicted RBP2.85□□□□□ -1.95
DDB1-212ENST00000538470 SPRR5A0A1B0GTR4 108 aa2.84□□□□□ -1.95
DDB1-212ENST00000538470 KRTAP20-2Q3LI61 65 aa2.84□□□□□ -1.95
DDB1-212ENST00000538470 KRTAP12-4P60329 112 aa2.8□□□□□ -1.96
DDB1-212ENST00000538470 BRK1Q8WUW1 75 aa2.78□□□□□ -1.96
DDB1-212ENST00000538470 SYNE1Q8NF91 8797 aaKnown RBP2.74□□□□□ -1.97
DDB1-212ENST00000538470 LCE3CQ5T5A8 94 aa2.67□□□□□ -1.98
DDB1-212ENST00000538470 PRO0628Q9UI54 55 aa2.64□□□□□ -1.99
DDB1-212ENST00000538470 MT1AP04731 61 aa2.63□□□□□ -1.99
DDB1-212ENST00000538470 KRTAP5-2Q701N4 177 aa2.63□□□□□ -1.99
DDB1-212ENST00000538470 PMAIP1Q13794 54 aa2.59□□□□□ -1.99
DDB1-212ENST00000538470 LCE1FQ5T754 118 aa2.59□□□□□ -1.99
DDB1-212ENST00000538470 NDUFAF8A1L188 74 aa2.58□□□□□ -2
DDB1-212ENST00000538470 KRTAP6-1Q3LI64 71 aa2.58□□□□□ -2
DDB1-212ENST00000538470 KRTAP5-8O75690 187 aa2.53□□□□□ -2
DDB1-212ENST00000538470 MT3P25713 68 aa2.53□□□□□ -2
DDB1-212ENST00000538470 AHNAKQ09666 5890 aaKnown RBP2.53□□□□□ -2
DDB1-212ENST00000538470 KRTAP9-6A8MVA2 160 aa2.52□□□□□ -2.01
DDB1-212ENST00000538470 MUC5ACP98088 5654 aa2.51□□□□□ -2.01
DDB1-212ENST00000538470 MUC5BQ9HC84 5762 aaPredicted RBP2.51□□□□□ -2.01
DDB1-212ENST00000538470 OBSCNQ5VST9 7968 aa2.49□□□□□ -2.01
DDB1-212ENST00000538470 KRTAP6-2Q3LI66 62 aa2.49□□□□□ -2.01
DDB1-212ENST00000538470 KTN1-AS1Q86SY8 53 aa2.46□□□□□ -2.02
DDB1-212ENST00000538470 KRTAP5-1Q6L8H4 278 aa2.36□□□□□ -2.03
DDB1-212ENST00000538470 LCE1EQ5T753 118 aa2.25□□□□□ -2.05
DDB1-212ENST00000538470 LCE3EQ5T5B0 92 aa2.2□□□□□ -2.06
DDB1-212ENST00000538470 KRTAP5-11Q6L8G4 156 aa2.13□□□□□ -2.07
DDB1-212ENST00000538470 LCE1CQ5T751 118 aa2.08□□□□□ -2.08
DDB1-212ENST00000538470 LCE1BQ5T7P3 118 aa2.08□□□□□ -2.08
DDB1-212ENST00000538470 LUZP6Q538Z0 58 aa2.07□□□□□ -2.08
DDB1-212ENST00000538470 KRTAP5-6Q6L8G9 129 aaPredicted RBP2□□□□□ -2.09
DDB1-212ENST00000538470 LCE3DQ9BYE3 92 aa1.95□□□□□ -2.1
DDB1-212ENST00000538470 PHGR1C9JFL3 82 aa1.72□□□□□ -2.13
DDB1-212ENST00000538470 KRTAP21-2Q3LI59 83 aa1.71□□□□□ -2.14
DDB1-212ENST00000538470 KRTAP4-4Q9BYR3 166 aa1.7□□□□□ -2.14
DDB1-212ENST00000538470 INE1O15225 51 aa1.56□□□□□ -2.16
DDB1-212ENST00000538470 MUC19Q7Z5P9 8384 aa1.53□□□□□ -2.17
DDB1-212ENST00000538470 PRM1P04553 51 aa1.49□□□□□ -2.17
DDB1-212ENST00000538470 KRTAP21-1Q3LI58 79 aa1.33□□□□□ -2.2
DDB1-212ENST00000538470 MUC16Q8WXI7 14507 aa1.04□□□□□ -2.24
Retrieved 78 of 20,778 RNA–protein pairs in 60 ms