RNA–Protein interactions for RNA: ENST00000538261.7

CLDN7-203, Transcript of claudin 7, humanhuman

TSL 5 BASIC

Gene CLDN7, Length 1,923 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLDN7-203ENST00000538261 SYNE2Q8WXH0 6885 aaKnown RBP6.21□□□□□ -1.41
CLDN7-203ENST00000538261 LCE3CQ5T5A8 94 aa6.21□□□□□ -1.42
CLDN7-203ENST00000538261 MT1LQ93083 61 aa6.17□□□□□ -1.42
CLDN7-203ENST00000538261 SPRR2FQ96RM1 72 aa6.15□□□□□ -1.42
CLDN7-203ENST00000538261 MUC12Q9UKN1 5478 aa6.14□□□□□ -1.43
CLDN7-203ENST00000538261 KRTAP9-1A8MXZ3 250 aaPredicted RBP6.13□□□□□ -1.43
CLDN7-203ENST00000538261 KRTAP5-9P26371 169 aa6.11□□□□□ -1.43
CLDN7-203ENST00000538261 KRTAP19-3Q7Z4W3 81 aa6.05□□□□□ -1.44
CLDN7-203ENST00000538261 KRTAP19-4Q3LI73 84 aa6.04□□□□□ -1.44
CLDN7-203ENST00000538261 KRTAP4-7Q9BYR0 210 aa6□□□□□ -1.45
CLDN7-203ENST00000538261 KRTAP6-3Q3LI67 103 aa5.97□□□□□ -1.45
CLDN7-203ENST00000538261 MT1GP13640 62 aa5.97□□□□□ -1.45
CLDN7-203ENST00000538261 LCE5AQ5TCM9 118 aa5.95□□□□□ -1.46
CLDN7-203ENST00000538261 MT1MQ8N339 61 aa5.93□□□□□ -1.46
CLDN7-203ENST00000538261 KRTAP9-6A8MVA2 160 aa5.91□□□□□ -1.46
CLDN7-203ENST00000538261 KRTAP2-3P0C7H8 128 aa5.91□□□□□ -1.46
CLDN7-203ENST00000538261 KRTAP2-4Q9BYR9 128 aa5.91□□□□□ -1.46
CLDN7-203ENST00000538261 KRTAP2-1Q9BYU5 128 aa5.91□□□□□ -1.46
CLDN7-203ENST00000538261 MDN1Q9NU22 5596 aa5.91□□□□□ -1.46
CLDN7-203ENST00000538261 LCE1AQ5T7P2 110 aa5.91□□□□□ -1.46
CLDN7-203ENST00000538261 KRTAP4-3Q9BYR4 195 aa5.84□□□□□ -1.48
CLDN7-203ENST00000538261 SPRR2EP22531 72 aa5.83□□□□□ -1.48
CLDN7-203ENST00000538261 SPRR2BP35325 72 aa5.83□□□□□ -1.48
CLDN7-203ENST00000538261 SPRR2AP35326 72 aa5.83□□□□□ -1.48
CLDN7-203ENST00000538261 KRTAP9-7A8MTY7 169 aa5.77□□□□□ -1.49
CLDN7-203ENST00000538261 KRTAP5-3Q6L8H2 238 aa5.68□□□□□ -1.5
CLDN7-203ENST00000538261 NEBP20929 6669 aa5.64□□□□□ -1.51
CLDN7-203ENST00000538261 DSTQ03001 7570 aaKnown RBP5.62□□□□□ -1.51
CLDN7-203ENST00000538261 SPRR2DP22532 72 aa5.62□□□□□ -1.51
CLDN7-203ENST00000538261 LCE3BQ5TA77 95 aa5.42□□□□□ -1.54
CLDN7-203ENST00000538261 KRTAP9-9Q9BYP9 154 aa5.41□□□□□ -1.54
CLDN7-203ENST00000538261 KRTAP9-4Q9BYQ2 154 aa5.41□□□□□ -1.54
CLDN7-203ENST00000538261 KRTAP5-5Q701N2 237 aaPredicted RBP5.38□□□□□ -1.55
CLDN7-203ENST00000538261 KRTAP4-2Q9BYR5 136 aa5.29□□□□□ -1.56
CLDN7-203ENST00000538261 MT1AP04731 61 aa5.24□□□□□ -1.57
CLDN7-203ENST00000538261 KRTAP12-4P60329 112 aa5.21□□□□□ -1.57
CLDN7-203ENST00000538261 KRTAP6-1Q3LI64 71 aa5.21□□□□□ -1.58
CLDN7-203ENST00000538261 KRTAP5-4Q6L8H1 288 aa5.12□□□□□ -1.59
CLDN7-203ENST00000538261 KRTAP20-1Q3LI63 56 aa5.11□□□□□ -1.59
CLDN7-203ENST00000538261 KRTAP4-9Q9BYQ8 210 aa5.09□□□□□ -1.59
CLDN7-203ENST00000538261 KRTAP2-2Q9BYT5 123 aa5.09□□□□□ -1.6
CLDN7-203ENST00000538261 SYNE1Q8NF91 8797 aaKnown RBP5.09□□□□□ -1.6
CLDN7-203ENST00000538261 LCE1DQ5T752 114 aa5.07□□□□□ -1.6
CLDN7-203ENST00000538261 KRTAP4-12Q9BQ66 201 aa5.01□□□□□ -1.61
CLDN7-203ENST00000538261 LCE4AQ5TA78 99 aa4.97□□□□□ -1.61
CLDN7-203ENST00000538261 MT4P47944 62 aa4.88□□□□□ -1.63
CLDN7-203ENST00000538261 LCE3DQ9BYE3 92 aa4.82□□□□□ -1.64
CLDN7-203ENST00000538261 LCE3EQ5T5B0 92 aa4.8□□□□□ -1.64
CLDN7-203ENST00000538261 KRTAP6-2Q3LI66 62 aa4.79□□□□□ -1.64
CLDN7-203ENST00000538261 KRTAP20-2Q3LI61 65 aa4.78□□□□□ -1.64
CLDN7-203ENST00000538261 HMCN1Q96RW7 5635 aa4.77□□□□□ -1.65
CLDN7-203ENST00000538261 MT3P25713 68 aa4.72□□□□□ -1.65
CLDN7-203ENST00000538261 KRTAP4-11Q9BYQ6 195 aa4.7□□□□□ -1.66
CLDN7-203ENST00000538261 KRTAP5-2Q701N4 177 aa4.65□□□□□ -1.67
CLDN7-203ENST00000538261 PRM1P04553 51 aa4.63□□□□□ -1.67
CLDN7-203ENST00000538261 OBSCNQ5VST9 7968 aa4.38□□□□□ -1.71
CLDN7-203ENST00000538261 AHNAK2Q8IVF2 5795 aa4.21□□□□□ -1.74
CLDN7-203ENST00000538261 LCE1EQ5T753 118 aa4.11□□□□□ -1.75
CLDN7-203ENST00000538261 GPR98Q8WXG9 6306 aa4.1□□□□□ -1.75
CLDN7-203ENST00000538261 KRTAP5-1Q6L8H4 278 aa4.02□□□□□ -1.77
CLDN7-203ENST00000538261 KRTAP5-10Q6L8G5 202 aa4□□□□□ -1.77
CLDN7-203ENST00000538261 KRTAP5-8O75690 187 aa3.99□□□□□ -1.77
CLDN7-203ENST00000538261 KRTAP5-6Q6L8G9 129 aaPredicted RBP3.96□□□□□ -1.78
CLDN7-203ENST00000538261 KRTAP5-7Q6L8G8 165 aa3.87□□□□□ -1.79
CLDN7-203ENST00000538261 LCE1BQ5T7P3 118 aa3.85□□□□□ -1.79
CLDN7-203ENST00000538261 MUC5ACP98088 5654 aa3.85□□□□□ -1.79
CLDN7-203ENST00000538261 LCE1CQ5T751 118 aa3.83□□□□□ -1.8
CLDN7-203ENST00000538261 KRTAP21-2Q3LI59 83 aa3.42□□□□□ -1.86
CLDN7-203ENST00000538261 MUC5BQ9HC84 5762 aaPredicted RBP3.4□□□□□ -1.87
CLDN7-203ENST00000538261 KRTAP5-11Q6L8G4 156 aa3.4□□□□□ -1.87
CLDN7-203ENST00000538261 AHNAKQ09666 5890 aaKnown RBP3.27□□□□□ -1.89
CLDN7-203ENST00000538261 KRTAP4-4Q9BYR3 166 aa3.27□□□□□ -1.89
CLDN7-203ENST00000538261 LCE1FQ5T754 118 aa3.03□□□□□ -1.92
CLDN7-203ENST00000538261 KRTAP21-1Q3LI58 79 aa3□□□□□ -1.93
CLDN7-203ENST00000538261 PHGR1C9JFL3 82 aa2.92□□□□□ -1.94
CLDN7-203ENST00000538261 MUC19Q7Z5P9 8384 aa2.61□□□□□ -1.99
CLDN7-203ENST00000538261 MUC16Q8WXI7 14507 aa1.86□□□□□ -2.11
Retrieved 77 of 20,778 RNA–protein pairs in 90.5 ms