RNA–Protein interactions for RNA: ENST00000538177.5

SLC28A1-204, Transcript of solute carrier family 28 member 1, humanhuman

TSL 2 BASIC

Gene SLC28A1, Length 2,155 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SLC28A1-204ENST00000538177 KRTAP9-6A0A140TA67 174 aa3.93□□□□□ -1.78
SLC28A1-204ENST00000538177 MACF1Q9UPN3 7388 aaKnown RBP3.91□□□□□ -1.78
SLC28A1-204ENST00000538177 SYNE2Q8WXH0 6885 aaKnown RBP3.85□□□□□ -1.79
SLC28A1-204ENST00000538177 KRTAP19-3Q7Z4W3 81 aa3.82□□□□□ -1.8
SLC28A1-204ENST00000538177 MT1GP13640 62 aa3.8□□□□□ -1.8
SLC28A1-204ENST00000538177 INE1O15225 51 aa3.79□□□□□ -1.8
SLC28A1-204ENST00000538177 KRTAP2-3P0C7H8 128 aa3.79□□□□□ -1.8
SLC28A1-204ENST00000538177 KRTAP2-4Q9BYR9 128 aa3.79□□□□□ -1.8
SLC28A1-204ENST00000538177 KRTAP2-1Q9BYU5 128 aa3.79□□□□□ -1.8
SLC28A1-204ENST00000538177 MT1MQ8N339 61 aa3.78□□□□□ -1.8
SLC28A1-204ENST00000538177 MUC12Q9UKN1 5478 aa3.77□□□□□ -1.81
SLC28A1-204ENST00000538177 KRTAP4-3Q9BYR4 195 aa3.76□□□□□ -1.81
SLC28A1-204ENST00000538177 SPRR2FQ96RM1 72 aa3.73□□□□□ -1.81
SLC28A1-204ENST00000538177 LCE5AQ5TCM9 118 aa3.72□□□□□ -1.81
SLC28A1-204ENST00000538177 LOC100996750A0A140TA64 210 aa3.69□□□□□ -1.82
SLC28A1-204ENST00000538177 KRTAP9-1A8MXZ3 250 aaPredicted RBP3.69□□□□□ -1.82
SLC28A1-204ENST00000538177 KRTAP5-9P26371 169 aa3.59□□□□□ -1.84
SLC28A1-204ENST00000538177 MDN1Q9NU22 5596 aa3.56□□□□□ -1.84
SLC28A1-204ENST00000538177 KRTAP9-7A8MTY7 169 aa3.55□□□□□ -1.84
SLC28A1-204ENST00000538177 KRTAP6-3Q3LI67 103 aa3.55□□□□□ -1.84
SLC28A1-204ENST00000538177 LCE1AQ5T7P2 110 aa3.54□□□□□ -1.84
SLC28A1-204ENST00000538177 NEBP20929 6669 aa3.48□□□□□ -1.85
SLC28A1-204ENST00000538177 DSTQ03001 7570 aaKnown RBP3.45□□□□□ -1.86
SLC28A1-204ENST00000538177 SPRR2EP22531 72 aa3.45□□□□□ -1.86
SLC28A1-204ENST00000538177 SPRR2BP35325 72 aa3.45□□□□□ -1.86
SLC28A1-204ENST00000538177 SPRR2AP35326 72 aa3.45□□□□□ -1.86
SLC28A1-204ENST00000538177 MT1AP04731 61 aa3.39□□□□□ -1.87
SLC28A1-204ENST00000538177 KRTAP6-1Q3LI64 71 aa3.39□□□□□ -1.87
SLC28A1-204ENST00000538177 KRTAP5-5Q701N2 237 aaPredicted RBP3.39□□□□□ -1.87
SLC28A1-204ENST00000538177 LCE3BQ5TA77 95 aa3.35□□□□□ -1.87
SLC28A1-204ENST00000538177 SPRR2DP22532 72 aa3.31□□□□□ -1.88
SLC28A1-204ENST00000538177 KRTAP12-4P60329 112 aa3.28□□□□□ -1.88
SLC28A1-204ENST00000538177 KRTAP4-9Q9BYQ8 210 aa3.25□□□□□ -1.89
SLC28A1-204ENST00000538177 GPR98Q8WXG9 6306 aa3.23□□□□□ -1.89
SLC28A1-204ENST00000538177 KRTAP9-4Q9BYQ2 154 aa3.21□□□□□ -1.9
SLC28A1-204ENST00000538177 SYNE1Q8NF91 8797 aaKnown RBP3.2□□□□□ -1.9
SLC28A1-204ENST00000538177 LCE3DQ9BYE3 92 aa3.16□□□□□ -1.9
SLC28A1-204ENST00000538177 KRTAP20-1Q3LI63 56 aa3.14□□□□□ -1.91
SLC28A1-204ENST00000538177 LCE3EQ5T5B0 92 aa3.11□□□□□ -1.91
SLC28A1-204ENST00000538177 KRTAP5-4Q6L8H1 288 aa3.08□□□□□ -1.92
SLC28A1-204ENST00000538177 KRTAP2-2Q9BYT5 123 aa3.07□□□□□ -1.92
SLC28A1-204ENST00000538177 KRTAP6-2Q3LI66 62 aa3.06□□□□□ -1.92
SLC28A1-204ENST00000538177 MT3P25713 68 aa3.05□□□□□ -1.92
SLC28A1-204ENST00000538177 LCE4AQ5TA78 99 aa2.93□□□□□ -1.94
SLC28A1-204ENST00000538177 KRTAP4-6Q9BYQ5 205 aa2.91□□□□□ -1.94
SLC28A1-204ENST00000538177 MT4P47944 62 aa2.9□□□□□ -1.95
SLC28A1-204ENST00000538177 KRTAP20-2Q3LI61 65 aa2.87□□□□□ -1.95
SLC28A1-204ENST00000538177 HMCN1Q96RW7 5635 aa2.86□□□□□ -1.95
SLC28A1-204ENST00000538177 PRM1P04553 51 aa2.86□□□□□ -1.95
SLC28A1-204ENST00000538177 KRTAP5-2Q701N4 177 aa2.85□□□□□ -1.95
SLC28A1-204ENST00000538177 LCE1DQ5T752 114 aa2.84□□□□□ -1.96
SLC28A1-204ENST00000538177 OBSCNQ5VST9 7968 aa2.77□□□□□ -1.97
SLC28A1-204ENST00000538177 KRTAP5-3Q6L8H2 238 aa2.76□□□□□ -1.97
SLC28A1-204ENST00000538177 MUC5BQ9HC84 5762 aaPredicted RBP2.61□□□□□ -1.99
SLC28A1-204ENST00000538177 AHNAK2Q8IVF2 5795 aa2.61□□□□□ -1.99
SLC28A1-204ENST00000538177 LCE1EQ5T753 118 aa2.58□□□□□ -2
SLC28A1-204ENST00000538177 AHNAKQ09666 5890 aaKnown RBP2.53□□□□□ -2
SLC28A1-204ENST00000538177 MUC5ACP98088 5654 aa2.51□□□□□ -2.01
SLC28A1-204ENST00000538177 LCE1BQ5T7P3 118 aa2.44□□□□□ -2.02
SLC28A1-204ENST00000538177 KRTAP5-10Q6L8G5 202 aa2.44□□□□□ -2.02
SLC28A1-204ENST00000538177 KRTAP5-7Q6L8G8 165 aa2.44□□□□□ -2.02
SLC28A1-204ENST00000538177 KRTAP5-1Q6L8H4 278 aa2.43□□□□□ -2.02
SLC28A1-204ENST00000538177 KRTAP4-11Q9BYQ6 195 aa2.42□□□□□ -2.02
SLC28A1-204ENST00000538177 LCE1CQ5T751 118 aa2.41□□□□□ -2.02
SLC28A1-204ENST00000538177 KRTAP4-2Q9BYR5 136 aa2.41□□□□□ -2.02
SLC28A1-204ENST00000538177 KRTAP5-8O75690 187 aa2.32□□□□□ -2.04
SLC28A1-204ENST00000538177 KRTAP5-6Q6L8G9 129 aaPredicted RBP2.29□□□□□ -2.04
SLC28A1-204ENST00000538177 KRTAP21-2Q3LI59 83 aa2.21□□□□□ -2.06
SLC28A1-204ENST00000538177 KRTAP9-9Q9BYP9 154 aa2.15□□□□□ -2.07
SLC28A1-204ENST00000538177 KRTAP5-11Q6L8G4 156 aa2.1□□□□□ -2.07
SLC28A1-204ENST00000538177 LCE1FQ5T754 118 aa1.99□□□□□ -2.09
SLC28A1-204ENST00000538177 KRTAP4-4Q9BYR3 166 aa1.95□□□□□ -2.1
SLC28A1-204ENST00000538177 KRTAP4-12Q9BQ66 201 aa1.93□□□□□ -2.1
SLC28A1-204ENST00000538177 KRTAP21-1Q3LI58 79 aa1.81□□□□□ -2.12
SLC28A1-204ENST00000538177 PHGR1C9JFL3 82 aa1.8□□□□□ -2.12
SLC28A1-204ENST00000538177 MUC19Q7Z5P9 8384 aa1.68□□□□□ -2.14
SLC28A1-204ENST00000538177 MUC16Q8WXI7 14507 aa1.2□□□□□ -2.22
Retrieved 77 of 20,778 RNA–protein pairs in 6 ms