RNA–Protein interactions for RNA: ENST00000538070.1

UBE3B-208, Transcript of ubiquitin protein ligase E3B, humanhuman

TSL 5

Gene UBE3B, Length 3,655 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBE3B-208ENST00000538070 LCE3CQ5T5A8 94 aa3.15□□□□□ -1.91
UBE3B-208ENST00000538070 KRTAP20-1Q3LI63 56 aa3.14□□□□□ -1.91
UBE3B-208ENST00000538070 MUC12Q9UKN1 5478 aa3.13□□□□□ -1.91
UBE3B-208ENST00000538070 FCGBPQ9Y6R7 5405 aaPredicted RBP3.1□□□□□ -1.91
UBE3B-208ENST00000538070 SYNE1Q8NF91 8797 aaKnown RBP3.1□□□□□ -1.91
UBE3B-208ENST00000538070 KRTAP19-7Q3SYF9 63 aa3.09□□□□□ -1.91
UBE3B-208ENST00000538070 KRTAP9-6A8MVA2 160 aa3.05□□□□□ -1.92
UBE3B-208ENST00000538070 KRTAP19-6Q3LI70 58 aa3.02□□□□□ -1.93
UBE3B-208ENST00000538070 KRTAP4-3Q9BYR4 195 aa3.02□□□□□ -1.93
UBE3B-208ENST00000538070 MT1EP04732 61 aa3.01□□□□□ -1.93
UBE3B-208ENST00000538070 MT1LQ93083 61 aa3.01□□□□□ -1.93
UBE3B-208ENST00000538070 KRTAP2-3P0C7H8 128 aa2.98□□□□□ -1.93
UBE3B-208ENST00000538070 KRTAP2-4Q9BYR9 128 aa2.98□□□□□ -1.93
UBE3B-208ENST00000538070 LOC100996750A0A140TA64 210 aa2.98□□□□□ -1.93
UBE3B-208ENST00000538070 MT1GP13640 62 aa2.95□□□□□ -1.94
UBE3B-208ENST00000538070 SPRR2FQ96RM1 72 aa2.95□□□□□ -1.94
UBE3B-208ENST00000538070 MACF1Q9UPN3 7388 aaKnown RBP2.95□□□□□ -1.94
UBE3B-208ENST00000538070 SYNE2Q8WXH0 6885 aaKnown RBP2.94□□□□□ -1.94
UBE3B-208ENST00000538070 NEBP20929 6669 aa2.89□□□□□ -1.95
UBE3B-208ENST00000538070 MDN1Q9NU22 5596 aa2.86□□□□□ -1.95
UBE3B-208ENST00000538070 KRTAP2-2Q9BYT5 123 aa2.85□□□□□ -1.95
UBE3B-208ENST00000538070 KRTAP2-1Q9BYU5 128 aa2.85□□□□□ -1.95
UBE3B-208ENST00000538070 KRTAP19-3Q7Z4W3 81 aa2.84□□□□□ -1.95
UBE3B-208ENST00000538070 MT1MQ8N339 61 aa2.84□□□□□ -1.95
UBE3B-208ENST00000538070 KRTAP5-9P26371 169 aa2.79□□□□□ -1.96
UBE3B-208ENST00000538070 GPR98Q8WXG9 6306 aa2.75□□□□□ -1.97
UBE3B-208ENST00000538070 LCE3BQ5TA77 95 aa2.75□□□□□ -1.97
UBE3B-208ENST00000538070 SPRR2EP22531 72 aa2.74□□□□□ -1.97
UBE3B-208ENST00000538070 SPRR2BP35325 72 aa2.74□□□□□ -1.97
UBE3B-208ENST00000538070 SPRR2AP35326 72 aa2.74□□□□□ -1.97
UBE3B-208ENST00000538070 KRTAP19-4Q3LI73 84 aa2.71□□□□□ -1.98
UBE3B-208ENST00000538070 LCE5AQ5TCM9 118 aa2.71□□□□□ -1.98
UBE3B-208ENST00000538070 KRTAP4-9Q9BYQ8 210 aa2.7□□□□□ -1.98
UBE3B-208ENST00000538070 SPRR2DP22532 72 aa2.68□□□□□ -1.98
UBE3B-208ENST00000538070 LCE1AQ5T7P2 110 aa2.66□□□□□ -1.98
UBE3B-208ENST00000538070 KRTAP12-4P60329 112 aa2.64□□□□□ -1.99
UBE3B-208ENST00000538070 KRTAP6-1Q3LI64 71 aa2.61□□□□□ -1.99
UBE3B-208ENST00000538070 MUC19Q7Z5P9 8384 aa2.55□□□□□ -2
UBE3B-208ENST00000538070 LCE1EQ5T753 118 aa2.53□□□□□ -2
UBE3B-208ENST00000538070 MT1AP04731 61 aa2.49□□□□□ -2.01
UBE3B-208ENST00000538070 LCE3DQ9BYE3 92 aa2.47□□□□□ -2.01
UBE3B-208ENST00000538070 KRTAP4-6Q9BYQ5 205 aa2.46□□□□□ -2.02
UBE3B-208ENST00000538070 LCE4AQ5TA78 99 aa2.45□□□□□ -2.02
UBE3B-208ENST00000538070 LCE3EQ5T5B0 92 aa2.41□□□□□ -2.02
UBE3B-208ENST00000538070 LCE1FQ5T754 118 aa2.41□□□□□ -2.02
UBE3B-208ENST00000538070 KRTAP6-2Q3LI66 62 aa2.38□□□□□ -2.03
UBE3B-208ENST00000538070 KRTAP5-7Q6L8G8 165 aa2.38□□□□□ -2.03
UBE3B-208ENST00000538070 KRTAP5-5Q701N2 237 aaPredicted RBP2.38□□□□□ -2.03
UBE3B-208ENST00000538070 MT4P47944 62 aa2.36□□□□□ -2.03
UBE3B-208ENST00000538070 KRTAP9-4Q9BYQ2 154 aa2.36□□□□□ -2.03
UBE3B-208ENST00000538070 LCE1DQ5T752 114 aa2.35□□□□□ -2.03
UBE3B-208ENST00000538070 PRM1P04553 51 aa2.33□□□□□ -2.04
UBE3B-208ENST00000538070 KRTAP5-10Q6L8G5 202 aa2.31□□□□□ -2.04
UBE3B-208ENST00000538070 MT3P25713 68 aa2.29□□□□□ -2.04
UBE3B-208ENST00000538070 KRTAP4-12Q9BQ66 201 aa2.27□□□□□ -2.05
UBE3B-208ENST00000538070 AHNAK2Q8IVF2 5795 aa2.24□□□□□ -2.05
UBE3B-208ENST00000538070 KRTAP5-3Q6L8H2 238 aa2.23□□□□□ -2.05
UBE3B-208ENST00000538070 HMCN1Q96RW7 5635 aa2.19□□□□□ -2.06
UBE3B-208ENST00000538070 AHNAKQ09666 5890 aaKnown RBP2.19□□□□□ -2.06
UBE3B-208ENST00000538070 MUC5BQ9HC84 5762 aaPredicted RBP2.17□□□□□ -2.06
UBE3B-208ENST00000538070 KRTAP5-4Q6L8H1 288 aa2.16□□□□□ -2.06
UBE3B-208ENST00000538070 KRTAP20-2Q3LI61 65 aa2.11□□□□□ -2.07
UBE3B-208ENST00000538070 LCE1BQ5T7P3 118 aa2.09□□□□□ -2.08
UBE3B-208ENST00000538070 KRTAP9-9Q9BYP9 154 aa2.06□□□□□ -2.08
UBE3B-208ENST00000538070 MUC5ACP98088 5654 aa2.01□□□□□ -2.09
UBE3B-208ENST00000538070 KRTAP4-11Q9BYQ6 195 aa1.98□□□□□ -2.09
UBE3B-208ENST00000538070 KRTAP5-2Q701N4 177 aa1.94□□□□□ -2.1
UBE3B-208ENST00000538070 KRTAP4-2Q9BYR5 136 aa1.9□□□□□ -2.11
UBE3B-208ENST00000538070 KRTAP5-8O75690 187 aa1.87□□□□□ -2.11
UBE3B-208ENST00000538070 KRTAP4-4Q9BYR3 166 aa1.74□□□□□ -2.13
UBE3B-208ENST00000538070 KRTAP5-1Q6L8H4 278 aa1.72□□□□□ -2.13
UBE3B-208ENST00000538070 LCE1CQ5T751 118 aa1.68□□□□□ -2.14
UBE3B-208ENST00000538070 KRTAP21-2Q3LI59 83 aa1.61□□□□□ -2.15
UBE3B-208ENST00000538070 KRTAP5-6Q6L8G9 129 aaPredicted RBP1.54□□□□□ -2.16
UBE3B-208ENST00000538070 PHGR1C9JFL3 82 aa1.45□□□□□ -2.18
UBE3B-208ENST00000538070 KRTAP5-11Q6L8G4 156 aa1.44□□□□□ -2.18
UBE3B-208ENST00000538070 KRTAP21-1Q3LI58 79 aa1.29□□□□□ -2.2
UBE3B-208ENST00000538070 MUC16Q8WXI7 14507 aa0.84□□□□□ -2.28
Retrieved 78 of 20,778 RNA–protein pairs in 183.8 ms