RNA–Protein interactions for RNA: ENST00000537983.1

NPIPB3-208, Transcript of nuclear pore complex interacting protein family member B3, humanhuman

TSL 4

Gene NPIPB3, Length 483 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NPIPB3-208ENST00000537983 KRTAP10-10P60014 251 aa2.42□□□□□ -2.02
NPIPB3-208ENST00000537983 LCE3AQ5TA76 89 aa2.39□□□□□ -2.03
NPIPB3-208ENST00000537983 KRTAP19-8Q3LI54 63 aa2.36□□□□□ -2.03
NPIPB3-208ENST00000537983 PLAC4Q8WY50 150 aa2.36□□□□□ -2.03
NPIPB3-208ENST00000537983 KRTAP25-1Q3LHN0 102 aa2.35□□□□□ -2.03
NPIPB3-208ENST00000537983 KRTAP4-4Q9BYR3 166 aa2.35□□□□□ -2.03
NPIPB3-208ENST00000537983 KRTAP5-4Q6L8H1 288 aa2.33□□□□□ -2.04
NPIPB3-208ENST00000537983 C10orf95Q9H7T3 257 aa2.33□□□□□ -2.04
NPIPB3-208ENST00000537983 MT1BP07438 61 aa2.31□□□□□ -2.04
NPIPB3-208ENST00000537983 LCE3DQ9BYE3 92 aa2.3□□□□□ -2.04
NPIPB3-208ENST00000537983 TNP1P09430 55 aa2.28□□□□□ -2.04
NPIPB3-208ENST00000537983 PP632Q6XCG6 107 aa2.27□□□□□ -2.05
NPIPB3-208ENST00000537983 SPRR5A0A1B0GTR4 108 aa2.26□□□□□ -2.05
NPIPB3-208ENST00000537983 MT1XP80297 61 aa2.25□□□□□ -2.05
NPIPB3-208ENST00000537983 PRO2289Q9P1D8 64 aa2.25□□□□□ -2.05
NPIPB3-208ENST00000537983 KRTAP5-5Q701N2 237 aaPredicted RBP2.24□□□□□ -2.05
NPIPB3-208ENST00000537983 OBSCNQ5VST9 7968 aa2.23□□□□□ -2.05
NPIPB3-208ENST00000537983 KRTAP5-9P26371 169 aa2.21□□□□□ -2.06
NPIPB3-208ENST00000537983 KRTAP19-6Q3LI70 58 aa2.14□□□□□ -2.07
NPIPB3-208ENST00000537983 KRTAP4-3Q9BYR4 195 aa2.14□□□□□ -2.07
NPIPB3-208ENST00000537983 KRTAP8-1Q8IUC2 63 aa2.13□□□□□ -2.07
NPIPB3-208ENST00000537983 USH2AO75445 5202 aa2.12□□□□□ -2.07
NPIPB3-208ENST00000537983 SSPOA2VEC9 5147 aa2.1□□□□□ -2.07
NPIPB3-208ENST00000537983 KRTAP12-3P60328 96 aa2.08□□□□□ -2.08
NPIPB3-208ENST00000537983 LCE1CQ5T751 118 aa2.05□□□□□ -2.08
NPIPB3-208ENST00000537983 LCE1BQ5T7P3 118 aa2.05□□□□□ -2.08
NPIPB3-208ENST00000537983 KRTAP19-5Q3LI72 72 aa2.03□□□□□ -2.08
NPIPB3-208ENST00000537983 KRTAP19-7Q3SYF9 63 aa2□□□□□ -2.09
NPIPB3-208ENST00000537983 MT1EP04732 61 aa1.98□□□□□ -2.09
NPIPB3-208ENST00000537983 LUZP6Q538Z0 58 aa1.97□□□□□ -2.09
NPIPB3-208ENST00000537983 CRCT1Q9UGL9 99 aa1.97□□□□□ -2.09
NPIPB3-208ENST00000537983 FCGBPQ9Y6R7 5405 aaPredicted RBP1.96□□□□□ -2.09
NPIPB3-208ENST00000537983 KMT2DO14686 5537 aa1.96□□□□□ -2.1
NPIPB3-208ENST00000537983 MT1LQ93083 61 aa1.94□□□□□ -2.1
NPIPB3-208ENST00000537983 KRTAP19-3Q7Z4W3 81 aa1.89□□□□□ -2.11
NPIPB3-208ENST00000537983 SPRR2FQ96RM1 72 aa1.89□□□□□ -2.11
NPIPB3-208ENST00000537983 FSIP2Q5CZC0 6907 aa1.89□□□□□ -2.11
NPIPB3-208ENST00000537983 KRTAP5-2Q701N4 177 aa1.88□□□□□ -2.11
NPIPB3-208ENST00000537983 MT1GP13640 62 aa1.87□□□□□ -2.11
NPIPB3-208ENST00000537983 MT1MQ8N339 61 aa1.85□□□□□ -2.11
NPIPB3-208ENST00000537983 MACF1Q9UPN3 7388 aaKnown RBP1.83□□□□□ -2.12
NPIPB3-208ENST00000537983 KRTAP6-3Q3LI67 103 aa1.81□□□□□ -2.12
NPIPB3-208ENST00000537983 MUC12Q9UKN1 5478 aa1.79□□□□□ -2.12
NPIPB3-208ENST00000537983 SPRR2EP22531 72 aa1.79□□□□□ -2.12
NPIPB3-208ENST00000537983 SPRR2BP35325 72 aa1.79□□□□□ -2.12
NPIPB3-208ENST00000537983 SPRR2AP35326 72 aa1.79□□□□□ -2.12
NPIPB3-208ENST00000537983 KRTAP5-7Q6L8G8 165 aa1.74□□□□□ -2.13
NPIPB3-208ENST00000537983 MDN1Q9NU22 5596 aa1.73□□□□□ -2.13
NPIPB3-208ENST00000537983 KRTAP2-3P0C7H8 128 aa1.72□□□□□ -2.13
NPIPB3-208ENST00000537983 SPRR2DP22532 72 aa1.72□□□□□ -2.13
NPIPB3-208ENST00000537983 KRTAP2-4Q9BYR9 128 aa1.72□□□□□ -2.13
NPIPB3-208ENST00000537983 KRTAP2-1Q9BYU5 128 aa1.72□□□□□ -2.13
NPIPB3-208ENST00000537983 SYNE2Q8WXH0 6885 aaKnown RBP1.7□□□□□ -2.14
NPIPB3-208ENST00000537983 KRTAP12-4P60329 112 aa1.68□□□□□ -2.14
NPIPB3-208ENST00000537983 MUC19Q7Z5P9 8384 aa1.67□□□□□ -2.14
NPIPB3-208ENST00000537983 MT1AP04731 61 aa1.66□□□□□ -2.14
NPIPB3-208ENST00000537983 INE1O15225 51 aa1.63□□□□□ -2.15
NPIPB3-208ENST00000537983 DSTQ03001 7570 aaKnown RBP1.62□□□□□ -2.15
NPIPB3-208ENST00000537983 KRTAP6-1Q3LI64 71 aa1.62□□□□□ -2.15
NPIPB3-208ENST00000537983 KRTAP5-8O75690 187 aa1.6□□□□□ -2.15
NPIPB3-208ENST00000537983 NEBP20929 6669 aa1.6□□□□□ -2.15
NPIPB3-208ENST00000537983 KRTAP20-1Q3LI63 56 aa1.53□□□□□ -2.16
NPIPB3-208ENST00000537983 SYNE1Q8NF91 8797 aaKnown RBP1.49□□□□□ -2.17
NPIPB3-208ENST00000537983 KRTAP6-2Q3LI66 62 aa1.48□□□□□ -2.17
NPIPB3-208ENST00000537983 KRTAP20-2Q3LI61 65 aa1.47□□□□□ -2.17
NPIPB3-208ENST00000537983 MT4P47944 62 aa1.46□□□□□ -2.18
NPIPB3-208ENST00000537983 KRTAP21-2Q3LI59 83 aa1.46□□□□□ -2.18
NPIPB3-208ENST00000537983 HMCN1Q96RW7 5635 aa1.41□□□□□ -2.18
NPIPB3-208ENST00000537983 PRM1P04553 51 aa1.26□□□□□ -2.21
NPIPB3-208ENST00000537983 GPR98Q8WXG9 6306 aa1.26□□□□□ -2.21
NPIPB3-208ENST00000537983 AHNAK2Q8IVF2 5795 aa1.24□□□□□ -2.21
NPIPB3-208ENST00000537983 KRTAP5-10Q6L8G5 202 aa1.23□□□□□ -2.21
NPIPB3-208ENST00000537983 MUC5ACP98088 5654 aa1.17□□□□□ -2.22
NPIPB3-208ENST00000537983 MUC5BQ9HC84 5762 aaPredicted RBP1.04□□□□□ -2.24
NPIPB3-208ENST00000537983 AHNAKQ09666 5890 aaKnown RBP0.94□□□□□ -2.26
NPIPB3-208ENST00000537983 PHGR1C9JFL3 82 aa0.91□□□□□ -2.26
NPIPB3-208ENST00000537983 MUC16Q8WXI7 14507 aa0.85□□□□□ -2.27
NPIPB3-208ENST00000537983 KRTAP21-1Q3LI58 79 aa0.79□□□□□ -2.28
Retrieved 78 of 20,778 RNA–protein pairs in 73.1 ms