RNA–Protein interactions for RNA: ENST00000537971.5

TSPAN9-206, Transcript of tetraspanin 9, humanhuman

APPRIS P1 TSL 3 BASIC

Gene TSPAN9, Length 4,284 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TSPAN9-206ENST00000537971 KRTAP4-8Q9BYQ9 185 aa4.58□□□□□ -1.68
TSPAN9-206ENST00000537971 SYNE2Q8WXH0 6885 aaKnown RBP4.58□□□□□ -1.68
TSPAN9-206ENST00000537971 MACF1Q9UPN3 7388 aaKnown RBP4.55□□□□□ -1.68
TSPAN9-206ENST00000537971 KRTAP2-3P0C7H8 128 aa4.53□□□□□ -1.68
TSPAN9-206ENST00000537971 KRTAP19-5Q3LI72 72 aa4.53□□□□□ -1.68
TSPAN9-206ENST00000537971 KRTAP2-4Q9BYR9 128 aa4.53□□□□□ -1.68
TSPAN9-206ENST00000537971 SPRR5A0A1B0GTR4 108 aa4.53□□□□□ -1.68
TSPAN9-206ENST00000537971 SYNE1Q8NF91 8797 aaKnown RBP4.49□□□□□ -1.69
TSPAN9-206ENST00000537971 KRTAP5-9P26371 169 aa4.43□□□□□ -1.7
TSPAN9-206ENST00000537971 LCE1AQ5T7P2 110 aa4.43□□□□□ -1.7
TSPAN9-206ENST00000537971 LCE3BQ5TA77 95 aa4.41□□□□□ -1.7
TSPAN9-206ENST00000537971 MT1GP13640 62 aa4.4□□□□□ -1.7
TSPAN9-206ENST00000537971 LCE3CQ5T5A8 94 aa4.38□□□□□ -1.71
TSPAN9-206ENST00000537971 KRTAP2-2Q9BYT5 123 aa4.38□□□□□ -1.71
TSPAN9-206ENST00000537971 KRTAP2-1Q9BYU5 128 aa4.38□□□□□ -1.71
TSPAN9-206ENST00000537971 KRTAP19-3Q7Z4W3 81 aa4.37□□□□□ -1.71
TSPAN9-206ENST00000537971 NEBP20929 6669 aa4.37□□□□□ -1.71
TSPAN9-206ENST00000537971 OBSCNQ5VST9 7968 aa4.35□□□□□ -1.71
TSPAN9-206ENST00000537971 MT1EP04732 61 aa4.31□□□□□ -1.72
TSPAN9-206ENST00000537971 KRTAP19-4Q3LI73 84 aa4.31□□□□□ -1.72
TSPAN9-206ENST00000537971 KMT2DO14686 5537 aa4.26□□□□□ -1.73
TSPAN9-206ENST00000537971 KRTAP19-7Q3SYF9 63 aa4.19□□□□□ -1.74
TSPAN9-206ENST00000537971 MT1LQ93083 61 aa4.18□□□□□ -1.74
TSPAN9-206ENST00000537971 MT1MQ8N339 61 aa4.15□□□□□ -1.75
TSPAN9-206ENST00000537971 KRTAP4-7Q9BYR0 210 aa4.14□□□□□ -1.75
TSPAN9-206ENST00000537971 MDN1Q9NU22 5596 aa4.13□□□□□ -1.75
TSPAN9-206ENST00000537971 KRTAP12-4P60329 112 aa4.11□□□□□ -1.75
TSPAN9-206ENST00000537971 LCE5AQ5TCM9 118 aa4.11□□□□□ -1.75
TSPAN9-206ENST00000537971 MT4P47944 62 aa4.07□□□□□ -1.76
TSPAN9-206ENST00000537971 LCE4AQ5TA78 99 aa4.03□□□□□ -1.76
TSPAN9-206ENST00000537971 MUC12Q9UKN1 5478 aa4.01□□□□□ -1.77
TSPAN9-206ENST00000537971 KRTAP9-6A8MVA2 160 aa3.97□□□□□ -1.77
TSPAN9-206ENST00000537971 KRTAP4-9Q9BYQ8 210 aa3.96□□□□□ -1.77
TSPAN9-206ENST00000537971 DSTQ03001 7570 aaKnown RBP3.96□□□□□ -1.77
TSPAN9-206ENST00000537971 KRTAP4-3Q9BYR4 195 aa3.92□□□□□ -1.78
TSPAN9-206ENST00000537971 LOC100996750A0A140TA64 210 aa3.84□□□□□ -1.79
TSPAN9-206ENST00000537971 GPR98Q8WXG9 6306 aa3.79□□□□□ -1.8
TSPAN9-206ENST00000537971 LCE1DQ5T752 114 aa3.78□□□□□ -1.8
TSPAN9-206ENST00000537971 LCE3DQ9BYE3 92 aa3.78□□□□□ -1.8
TSPAN9-206ENST00000537971 LCE3EQ5T5B0 92 aa3.69□□□□□ -1.82
TSPAN9-206ENST00000537971 MT1AP04731 61 aa3.67□□□□□ -1.82
TSPAN9-206ENST00000537971 MT3P25713 68 aa3.59□□□□□ -1.83
TSPAN9-206ENST00000537971 KRTAP4-6Q9BYQ5 205 aa3.59□□□□□ -1.83
TSPAN9-206ENST00000537971 KRTAP20-2Q3LI61 65 aa3.53□□□□□ -1.84
TSPAN9-206ENST00000537971 KRTAP5-4Q6L8H1 288 aa3.52□□□□□ -1.85
TSPAN9-206ENST00000537971 KRTAP5-5Q701N2 237 aaPredicted RBP3.52□□□□□ -1.85
TSPAN9-206ENST00000537971 KRTAP6-1Q3LI64 71 aa3.49□□□□□ -1.85
TSPAN9-206ENST00000537971 PRM1P04553 51 aa3.48□□□□□ -1.85
TSPAN9-206ENST00000537971 KRTAP9-4Q9BYQ2 154 aa3.47□□□□□ -1.85
TSPAN9-206ENST00000537971 KRTAP6-2Q3LI66 62 aa3.41□□□□□ -1.86
TSPAN9-206ENST00000537971 KRTAP5-3Q6L8H2 238 aa3.38□□□□□ -1.87
TSPAN9-206ENST00000537971 HMCN1Q96RW7 5635 aa3.35□□□□□ -1.87
TSPAN9-206ENST00000537971 LCE1BQ5T7P3 118 aa3.34□□□□□ -1.87
TSPAN9-206ENST00000537971 KRTAP9-9Q9BYP9 154 aa3.28□□□□□ -1.88
TSPAN9-206ENST00000537971 MUC19Q7Z5P9 8384 aa3.28□□□□□ -1.88
TSPAN9-206ENST00000537971 KRTAP4-11Q9BYQ6 195 aa3.26□□□□□ -1.89
TSPAN9-206ENST00000537971 AHNAK2Q8IVF2 5795 aa3.25□□□□□ -1.89
TSPAN9-206ENST00000537971 KRTAP5-10Q6L8G5 202 aa3.16□□□□□ -1.9
TSPAN9-206ENST00000537971 KRTAP5-7Q6L8G8 165 aa3.1□□□□□ -1.91
TSPAN9-206ENST00000537971 KRTAP5-2Q701N4 177 aa3.06□□□□□ -1.92
TSPAN9-206ENST00000537971 KRTAP5-8O75690 187 aa2.97□□□□□ -1.93
TSPAN9-206ENST00000537971 LCE1EQ5T753 118 aa2.93□□□□□ -1.94
TSPAN9-206ENST00000537971 AHNAKQ09666 5890 aaKnown RBP2.89□□□□□ -1.95
TSPAN9-206ENST00000537971 MUC5ACP98088 5654 aa2.79□□□□□ -1.96
TSPAN9-206ENST00000537971 LCE1FQ5T754 118 aa2.76□□□□□ -1.97
TSPAN9-206ENST00000537971 KRTAP5-1Q6L8H4 278 aa2.71□□□□□ -1.98
TSPAN9-206ENST00000537971 LCE1CQ5T751 118 aa2.68□□□□□ -1.98
TSPAN9-206ENST00000537971 MUC5BQ9HC84 5762 aaPredicted RBP2.64□□□□□ -1.99
TSPAN9-206ENST00000537971 KRTAP4-12Q9BQ66 201 aa2.59□□□□□ -2
TSPAN9-206ENST00000537971 KRTAP4-2Q9BYR5 136 aa2.59□□□□□ -2
TSPAN9-206ENST00000537971 KRTAP5-6Q6L8G9 129 aaPredicted RBP2.54□□□□□ -2
TSPAN9-206ENST00000537971 KRTAP4-4Q9BYR3 166 aa2.51□□□□□ -2.01
TSPAN9-206ENST00000537971 KRTAP5-11Q6L8G4 156 aa2.37□□□□□ -2.03
TSPAN9-206ENST00000537971 PHGR1C9JFL3 82 aa2.23□□□□□ -2.05
TSPAN9-206ENST00000537971 KRTAP21-2Q3LI59 83 aa2.18□□□□□ -2.06
TSPAN9-206ENST00000537971 KRTAP21-1Q3LI58 79 aa1.84□□□□□ -2.11
TSPAN9-206ENST00000537971 MUC16Q8WXI7 14507 aa1.39□□□□□ -2.19
Retrieved 77 of 20,778 RNA–protein pairs in 78.6 ms