RNA–Protein interactions for RNA: ENST00000537392.1

PMFBP1-206, Transcript of polyamine modulated factor 1 binding protein 1, humanhuman

TSL 2

Gene PMFBP1, Length 2,038 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PMFBP1-206ENST00000537392 MT1LQ93083 61 aa3.36□□□□□ -1.87
PMFBP1-206ENST00000537392 SPRR2FQ96RM1 72 aa3.36□□□□□ -1.87
PMFBP1-206ENST00000537392 SYNE2Q8WXH0 6885 aaKnown RBP3.35□□□□□ -1.87
PMFBP1-206ENST00000537392 KRTAP9-1A8MXZ3 250 aaPredicted RBP3.34□□□□□ -1.87
PMFBP1-206ENST00000537392 MUC12Q9UKN1 5478 aa3.34□□□□□ -1.87
PMFBP1-206ENST00000537392 KRTAP5-9P26371 169 aa3.32□□□□□ -1.88
PMFBP1-206ENST00000537392 LCE3CQ5T5A8 94 aa3.31□□□□□ -1.88
PMFBP1-206ENST00000537392 KRTAP19-3Q7Z4W3 81 aa3.29□□□□□ -1.88
PMFBP1-206ENST00000537392 KRTAP4-7Q9BYR0 210 aa3.27□□□□□ -1.89
PMFBP1-206ENST00000537392 KRTAP6-3Q3LI67 103 aa3.26□□□□□ -1.89
PMFBP1-206ENST00000537392 MT1GP13640 62 aa3.26□□□□□ -1.89
PMFBP1-206ENST00000537392 KRTAP9-7A8MTY7 169 aa3.25□□□□□ -1.89
PMFBP1-206ENST00000537392 LCE5AQ5TCM9 118 aa3.24□□□□□ -1.89
PMFBP1-206ENST00000537392 MDN1Q9NU22 5596 aa3.23□□□□□ -1.89
PMFBP1-206ENST00000537392 MT1MQ8N339 61 aa3.23□□□□□ -1.89
PMFBP1-206ENST00000537392 LCE1AQ5T7P2 110 aa3.22□□□□□ -1.89
PMFBP1-206ENST00000537392 SPRR2EP22531 72 aa3.19□□□□□ -1.9
PMFBP1-206ENST00000537392 SPRR2BP35325 72 aa3.19□□□□□ -1.9
PMFBP1-206ENST00000537392 SPRR2AP35326 72 aa3.19□□□□□ -1.9
PMFBP1-206ENST00000537392 KRTAP4-3Q9BYR4 195 aa3.19□□□□□ -1.9
PMFBP1-206ENST00000537392 KRTAP9-6A8MVA2 160 aa3.15□□□□□ -1.9
PMFBP1-206ENST00000537392 KRTAP9-4Q9BYQ2 154 aa3.13□□□□□ -1.91
PMFBP1-206ENST00000537392 LCE4AQ5TA78 99 aa3.08□□□□□ -1.92
PMFBP1-206ENST00000537392 LOC100996750A0A140TA64 210 aa3.07□□□□□ -1.92
PMFBP1-206ENST00000537392 SPRR2DP22532 72 aa3.07□□□□□ -1.92
PMFBP1-206ENST00000537392 DSTQ03001 7570 aaKnown RBP3.07□□□□□ -1.92
PMFBP1-206ENST00000537392 KRTAP9-9Q9BYP9 154 aa3.05□□□□□ -1.92
PMFBP1-206ENST00000537392 NEBP20929 6669 aa3.05□□□□□ -1.92
PMFBP1-206ENST00000537392 GPR98Q8WXG9 6306 aa2.98□□□□□ -1.93
PMFBP1-206ENST00000537392 LCE3BQ5TA77 95 aa2.95□□□□□ -1.94
PMFBP1-206ENST00000537392 KRTAP4-12Q9BQ66 201 aa2.94□□□□□ -1.94
PMFBP1-206ENST00000537392 KRTAP5-5Q701N2 237 aaPredicted RBP2.92□□□□□ -1.94
PMFBP1-206ENST00000537392 KRTAP2-2Q9BYT5 123 aa2.92□□□□□ -1.94
PMFBP1-206ENST00000537392 KRTAP4-6Q9BYQ5 205 aa2.92□□□□□ -1.94
PMFBP1-206ENST00000537392 KRTAP2-3P0C7H8 128 aa2.9□□□□□ -1.95
PMFBP1-206ENST00000537392 KRTAP2-4Q9BYR9 128 aa2.9□□□□□ -1.95
PMFBP1-206ENST00000537392 KRTAP2-1Q9BYU5 128 aa2.9□□□□□ -1.95
PMFBP1-206ENST00000537392 LCE1FQ5T754 118 aa2.89□□□□□ -1.95
PMFBP1-206ENST00000537392 MT1AP04731 61 aa2.85□□□□□ -1.95
PMFBP1-206ENST00000537392 KRTAP6-1Q3LI64 71 aa2.84□□□□□ -1.95
PMFBP1-206ENST00000537392 KRTAP20-1Q3LI63 56 aa2.8□□□□□ -1.96
PMFBP1-206ENST00000537392 KRTAP5-4Q6L8H1 288 aa2.78□□□□□ -1.96
PMFBP1-206ENST00000537392 SYNE1Q8NF91 8797 aaKnown RBP2.76□□□□□ -1.97
PMFBP1-206ENST00000537392 MT3P25713 68 aa2.72□□□□□ -1.97
PMFBP1-206ENST00000537392 KRTAP12-4P60329 112 aa2.69□□□□□ -1.98
PMFBP1-206ENST00000537392 MT4P47944 62 aa2.68□□□□□ -1.98
PMFBP1-206ENST00000537392 KRTAP4-9Q9BYQ8 210 aa2.65□□□□□ -1.99
PMFBP1-206ENST00000537392 LCE1DQ5T752 114 aa2.63□□□□□ -1.99
PMFBP1-206ENST00000537392 KRTAP6-2Q3LI66 62 aa2.61□□□□□ -1.99
PMFBP1-206ENST00000537392 KRTAP20-2Q3LI61 65 aa2.61□□□□□ -1.99
PMFBP1-206ENST00000537392 HMCN1Q96RW7 5635 aa2.6□□□□□ -1.99
PMFBP1-206ENST00000537392 LCE1EQ5T753 118 aa2.54□□□□□ -2
PMFBP1-206ENST00000537392 KRTAP5-2Q701N4 177 aa2.52□□□□□ -2.01
PMFBP1-206ENST00000537392 KRTAP5-3Q6L8H2 238 aa2.51□□□□□ -2.01
PMFBP1-206ENST00000537392 LCE3EQ5T5B0 92 aa2.48□□□□□ -2.01
PMFBP1-206ENST00000537392 LCE3DQ9BYE3 92 aa2.48□□□□□ -2.01
PMFBP1-206ENST00000537392 KRTAP4-11Q9BYQ6 195 aa2.44□□□□□ -2.02
PMFBP1-206ENST00000537392 AHNAK2Q8IVF2 5795 aa2.44□□□□□ -2.02
PMFBP1-206ENST00000537392 OBSCNQ5VST9 7968 aa2.38□□□□□ -2.03
PMFBP1-206ENST00000537392 MUC5BQ9HC84 5762 aaPredicted RBP2.34□□□□□ -2.04
PMFBP1-206ENST00000537392 KRTAP4-2Q9BYR5 136 aa2.31□□□□□ -2.04
PMFBP1-206ENST00000537392 AHNAKQ09666 5890 aaKnown RBP2.3□□□□□ -2.04
PMFBP1-206ENST00000537392 KRTAP5-7Q6L8G8 165 aa2.3□□□□□ -2.04
PMFBP1-206ENST00000537392 PRM1P04553 51 aa2.22□□□□□ -2.05
PMFBP1-206ENST00000537392 KRTAP5-10Q6L8G5 202 aa2.19□□□□□ -2.06
PMFBP1-206ENST00000537392 KRTAP5-1Q6L8H4 278 aa2.19□□□□□ -2.06
PMFBP1-206ENST00000537392 KRTAP5-8O75690 187 aa2.17□□□□□ -2.06
PMFBP1-206ENST00000537392 LCE1BQ5T7P3 118 aa2.11□□□□□ -2.07
PMFBP1-206ENST00000537392 MUC5ACP98088 5654 aa2.1□□□□□ -2.07
PMFBP1-206ENST00000537392 LCE1CQ5T751 118 aa2.09□□□□□ -2.07
PMFBP1-206ENST00000537392 KRTAP5-6Q6L8G9 129 aaPredicted RBP1.96□□□□□ -2.1
PMFBP1-206ENST00000537392 KRTAP21-2Q3LI59 83 aa1.86□□□□□ -2.11
PMFBP1-206ENST00000537392 KRTAP5-11Q6L8G4 156 aa1.84□□□□□ -2.11
PMFBP1-206ENST00000537392 KRTAP4-4Q9BYR3 166 aa1.66□□□□□ -2.14
PMFBP1-206ENST00000537392 PHGR1C9JFL3 82 aa1.59□□□□□ -2.16
PMFBP1-206ENST00000537392 KRTAP21-1Q3LI58 79 aa1.5□□□□□ -2.17
PMFBP1-206ENST00000537392 MUC19Q7Z5P9 8384 aa1.42□□□□□ -2.18
PMFBP1-206ENST00000537392 MUC16Q8WXI7 14507 aa1.02□□□□□ -2.25
Retrieved 78 of 20,778 RNA–protein pairs in 70.7 ms