RNA–Protein interactions for RNA: ENST00000536226.1

CRNKL1-207, Transcript of crooked neck pre-mRNA splicing factor 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CRNKL1, Length 4,009 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CRNKL1-207ENST00000536226 KRTAP4-6Q9BYQ5 205 aa2.56□□□□□ -2
CRNKL1-207ENST00000536226 FCGBPQ9Y6R7 5405 aaPredicted RBP2.56□□□□□ -2
CRNKL1-207ENST00000536226 OBSCNQ5VST9 7968 aa2.55□□□□□ -2
CRNKL1-207ENST00000536226 KRTAP19-6Q3LI70 58 aa2.54□□□□□ -2
CRNKL1-207ENST00000536226 KRTAP9-6A0A140TA67 174 aa2.53□□□□□ -2
CRNKL1-207ENST00000536226 LCE3DQ9BYE3 92 aa2.53□□□□□ -2
CRNKL1-207ENST00000536226 SYNE1Q8NF91 8797 aaKnown RBP2.53□□□□□ -2.01
CRNKL1-207ENST00000536226 KRTAP4-8A0A0G2JLE6 195 aa2.52□□□□□ -2.01
CRNKL1-207ENST00000536226 KRTAP4-8Q9BYQ9 185 aa2.52□□□□□ -2.01
CRNKL1-207ENST00000536226 KRTAP19-7Q3SYF9 63 aa2.51□□□□□ -2.01
CRNKL1-207ENST00000536226 KRTAP6-3Q3LI67 103 aa2.51□□□□□ -2.01
CRNKL1-207ENST00000536226 LCE1EQ5T753 118 aa2.51□□□□□ -2.01
CRNKL1-207ENST00000536226 FSIP2Q5CZC0 6907 aa2.5□□□□□ -2.01
CRNKL1-207ENST00000536226 KRTAP9-6A8MVA2 160 aa2.49□□□□□ -2.01
CRNKL1-207ENST00000536226 LCE3BQ5TA77 95 aa2.46□□□□□ -2.02
CRNKL1-207ENST00000536226 MUC12Q9UKN1 5478 aa2.43□□□□□ -2.02
CRNKL1-207ENST00000536226 KRTAP4-7Q9BYR0 210 aa2.42□□□□□ -2.02
CRNKL1-207ENST00000536226 MACF1Q9UPN3 7388 aaKnown RBP2.4□□□□□ -2.03
CRNKL1-207ENST00000536226 MT1EP04732 61 aa2.39□□□□□ -2.03
CRNKL1-207ENST00000536226 MT1LQ93083 61 aa2.37□□□□□ -2.03
CRNKL1-207ENST00000536226 MT1GP13640 62 aa2.37□□□□□ -2.03
CRNKL1-207ENST00000536226 LCE1DQ5T752 114 aa2.36□□□□□ -2.03
CRNKL1-207ENST00000536226 KRTAP9-7A8MTY7 169 aa2.36□□□□□ -2.03
CRNKL1-207ENST00000536226 MDN1Q9NU22 5596 aa2.35□□□□□ -2.03
CRNKL1-207ENST00000536226 KRTAP9-2Q9BYQ4 174 aa2.35□□□□□ -2.03
CRNKL1-207ENST00000536226 LCE5AQ5TCM9 118 aa2.34□□□□□ -2.04
CRNKL1-207ENST00000536226 LCE1FQ5T754 118 aa2.33□□□□□ -2.04
CRNKL1-207ENST00000536226 SYNE2Q8WXH0 6885 aaKnown RBP2.32□□□□□ -2.04
CRNKL1-207ENST00000536226 MT1AP04731 61 aa2.29□□□□□ -2.04
CRNKL1-207ENST00000536226 KRTAP5-9P26371 169 aa2.26□□□□□ -2.05
CRNKL1-207ENST00000536226 KRTAP4-3Q9BYR4 195 aa2.26□□□□□ -2.05
CRNKL1-207ENST00000536226 KRTAP6-2Q3LI66 62 aa2.26□□□□□ -2.05
CRNKL1-207ENST00000536226 KRTAP4-9Q9BYQ8 210 aa2.25□□□□□ -2.05
CRNKL1-207ENST00000536226 MT1MQ8N339 61 aa2.23□□□□□ -2.05
CRNKL1-207ENST00000536226 KRTAP9-1A8MXZ3 250 aaPredicted RBP2.22□□□□□ -2.05
CRNKL1-207ENST00000536226 KRTAP19-3Q7Z4W3 81 aa2.22□□□□□ -2.05
CRNKL1-207ENST00000536226 DSTQ03001 7570 aaKnown RBP2.2□□□□□ -2.06
CRNKL1-207ENST00000536226 SPRR2FQ96RM1 72 aa2.19□□□□□ -2.06
CRNKL1-207ENST00000536226 KRTAP4-12Q9BQ66 201 aa2.19□□□□□ -2.06
CRNKL1-207ENST00000536226 KRTAP5-5Q701N2 237 aaPredicted RBP2.16□□□□□ -2.06
CRNKL1-207ENST00000536226 SPRR2AP35326 72 aa2.15□□□□□ -2.07
CRNKL1-207ENST00000536226 KRTAP9-9Q9BYP9 154 aa2.12□□□□□ -2.07
CRNKL1-207ENST00000536226 KRTAP9-4Q9BYQ2 154 aa2.12□□□□□ -2.07
CRNKL1-207ENST00000536226 SPRR2DP22532 72 aa2.12□□□□□ -2.07
CRNKL1-207ENST00000536226 SPRR2BP35325 72 aa2.11□□□□□ -2.07
CRNKL1-207ENST00000536226 MUC19Q7Z5P9 8384 aa2.11□□□□□ -2.07
CRNKL1-207ENST00000536226 SPRR2EP22531 72 aa2.05□□□□□ -2.08
CRNKL1-207ENST00000536226 KRTAP6-1Q3LI64 71 aa2.01□□□□□ -2.09
CRNKL1-207ENST00000536226 NEBP20929 6669 aa2.01□□□□□ -2.09
CRNKL1-207ENST00000536226 KRTAP4-2Q9BYR5 136 aa1.99□□□□□ -2.09
CRNKL1-207ENST00000536226 LCE4AQ5TA78 99 aa1.96□□□□□ -2.1
CRNKL1-207ENST00000536226 KRTAP5-4Q6L8H1 288 aa1.96□□□□□ -2.1
CRNKL1-207ENST00000536226 KRTAP4-11Q9BYQ6 195 aa1.89□□□□□ -2.11
CRNKL1-207ENST00000536226 HMCN1Q96RW7 5635 aa1.83□□□□□ -2.12
CRNKL1-207ENST00000536226 KRTAP5-2Q701N4 177 aa1.82□□□□□ -2.12
CRNKL1-207ENST00000536226 GPR98Q8WXG9 6306 aa1.82□□□□□ -2.12
CRNKL1-207ENST00000536226 KRTAP5-3Q6L8H2 238 aa1.81□□□□□ -2.12
CRNKL1-207ENST00000536226 KRTAP20-2Q3LI61 65 aa1.74□□□□□ -2.13
CRNKL1-207ENST00000536226 LCE1CQ5T751 118 aa1.68□□□□□ -2.14
CRNKL1-207ENST00000536226 LCE1BQ5T7P3 118 aa1.68□□□□□ -2.14
CRNKL1-207ENST00000536226 KRTAP20-1Q3LI63 56 aa1.65□□□□□ -2.14
CRNKL1-207ENST00000536226 MT4P47944 62 aa1.64□□□□□ -2.15
CRNKL1-207ENST00000536226 MUC5ACP98088 5654 aa1.58□□□□□ -2.16
CRNKL1-207ENST00000536226 KRTAP5-10Q6L8G5 202 aa1.56□□□□□ -2.16
CRNKL1-207ENST00000536226 KRTAP5-1Q6L8H4 278 aa1.56□□□□□ -2.16
CRNKL1-207ENST00000536226 AHNAK2Q8IVF2 5795 aa1.54□□□□□ -2.16
CRNKL1-207ENST00000536226 KRTAP5-7Q6L8G8 165 aa1.5□□□□□ -2.17
CRNKL1-207ENST00000536226 KRTAP21-1Q3LI58 79 aa1.49□□□□□ -2.17
CRNKL1-207ENST00000536226 KRTAP5-8O75690 187 aa1.49□□□□□ -2.17
CRNKL1-207ENST00000536226 KRTAP5-6Q6L8G9 129 aaPredicted RBP1.47□□□□□ -2.17
CRNKL1-207ENST00000536226 KRTAP21-2Q3LI59 83 aa1.38□□□□□ -2.19
CRNKL1-207ENST00000536226 AHNAKQ09666 5890 aaKnown RBP1.36□□□□□ -2.19
CRNKL1-207ENST00000536226 MUC5BQ9HC84 5762 aaPredicted RBP1.33□□□□□ -2.2
CRNKL1-207ENST00000536226 KRTAP5-11Q6L8G4 156 aa1.29□□□□□ -2.2
CRNKL1-207ENST00000536226 KRTAP4-4Q9BYR3 166 aa1.29□□□□□ -2.2
CRNKL1-207ENST00000536226 PHGR1C9JFL3 82 aa1.11□□□□□ -2.23
CRNKL1-207ENST00000536226 MUC16Q8WXI7 14507 aa0.79□□□□□ -2.28
Retrieved 77 of 20,778 RNA–protein pairs in 102.7 ms