RNA–Protein interactions for RNA: ENST00000535926.2

CHPF-203, Transcript of chondroitin polymerizing factor, humanhuman

TSL 2 BASIC

Gene CHPF, Length 2,634 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHPF-203ENST00000535926 FCGBPQ9Y6R7 5405 aaPredicted RBP6.17□□□□□ -1.42
CHPF-203ENST00000535926 KRTAP4-3Q9BYR4 195 aa6.17□□□□□ -1.42
CHPF-203ENST00000535926 LOC100996750A0A140TA64 210 aa6.16□□□□□ -1.42
CHPF-203ENST00000535926 MUC12Q9UKN1 5478 aa6.13□□□□□ -1.43
CHPF-203ENST00000535926 LCE2DQ5TA82 110 aaPredicted RBP6.12□□□□□ -1.43
CHPF-203ENST00000535926 MT1GP13640 62 aa6.06□□□□□ -1.44
CHPF-203ENST00000535926 MT1MQ8N339 61 aa6.01□□□□□ -1.45
CHPF-203ENST00000535926 KRTAP19-3Q7Z4W3 81 aa5.99□□□□□ -1.45
CHPF-203ENST00000535926 DSTQ03001 7570 aaKnown RBP5.93□□□□□ -1.46
CHPF-203ENST00000535926 CRCT1Q9UGL9 99 aa5.92□□□□□ -1.46
CHPF-203ENST00000535926 LCE5AQ5TCM9 118 aa5.79□□□□□ -1.48
CHPF-203ENST00000535926 SPRR2FQ96RM1 72 aa5.75□□□□□ -1.49
CHPF-203ENST00000535926 MACF1Q9UPN3 7388 aaKnown RBP5.7□□□□□ -1.5
CHPF-203ENST00000535926 KRTAP12-4P60329 112 aa5.7□□□□□ -1.5
CHPF-203ENST00000535926 KRTAP9-2Q9BYQ4 174 aa5.7□□□□□ -1.5
CHPF-203ENST00000535926 LCE3BQ5TA77 95 aa5.61□□□□□ -1.51
CHPF-203ENST00000535926 KRTAP4-9Q9BYQ8 210 aa5.56□□□□□ -1.52
CHPF-203ENST00000535926 MDN1Q9NU22 5596 aa5.55□□□□□ -1.52
CHPF-203ENST00000535926 SYNE2Q8WXH0 6885 aaKnown RBP5.53□□□□□ -1.52
CHPF-203ENST00000535926 SYNE1Q8NF91 8797 aaKnown RBP5.52□□□□□ -1.53
CHPF-203ENST00000535926 KRTAP6-1Q3LI64 71 aa5.5□□□□□ -1.53
CHPF-203ENST00000535926 MT1AP04731 61 aa5.41□□□□□ -1.54
CHPF-203ENST00000535926 LCE1AQ5T7P2 110 aa5.36□□□□□ -1.55
CHPF-203ENST00000535926 KRTAP5-5Q701N2 237 aaPredicted RBP5.31□□□□□ -1.56
CHPF-203ENST00000535926 LCE3DQ9BYE3 92 aa5.29□□□□□ -1.56
CHPF-203ENST00000535926 KRTAP5-9P26371 169 aa5.28□□□□□ -1.56
CHPF-203ENST00000535926 KRTAP9-6A0A140TA67 174 aa5.27□□□□□ -1.57
CHPF-203ENST00000535926 LCE3EQ5T5B0 92 aa5.22□□□□□ -1.57
CHPF-203ENST00000535926 SPRR2EP22531 72 aa5.18□□□□□ -1.58
CHPF-203ENST00000535926 SPRR2BP35325 72 aa5.18□□□□□ -1.58
CHPF-203ENST00000535926 SPRR2AP35326 72 aa5.18□□□□□ -1.58
CHPF-203ENST00000535926 KRTAP9-7A8MTY7 169 aa5.15□□□□□ -1.59
CHPF-203ENST00000535926 KRTAP9-4Q9BYQ2 154 aa5.09□□□□□ -1.6
CHPF-203ENST00000535926 KRTAP9-1A8MXZ3 250 aaPredicted RBP5.05□□□□□ -1.6
CHPF-203ENST00000535926 PRM1P04553 51 aa5.05□□□□□ -1.6
CHPF-203ENST00000535926 OBSCNQ5VST9 7968 aa4.99□□□□□ -1.61
CHPF-203ENST00000535926 SPRR2DP22532 72 aa4.94□□□□□ -1.62
CHPF-203ENST00000535926 KRTAP6-2Q3LI66 62 aa4.92□□□□□ -1.62
CHPF-203ENST00000535926 KRTAP6-3Q3LI67 103 aa4.84□□□□□ -1.63
CHPF-203ENST00000535926 MT3P25713 68 aa4.83□□□□□ -1.64
CHPF-203ENST00000535926 KRTAP5-4Q6L8H1 288 aa4.6□□□□□ -1.67
CHPF-203ENST00000535926 NEBP20929 6669 aa4.56□□□□□ -1.68
CHPF-203ENST00000535926 KRTAP4-6Q9BYQ5 205 aa4.5□□□□□ -1.69
CHPF-203ENST00000535926 KRTAP2-2Q9BYT5 123 aa4.44□□□□□ -1.7
CHPF-203ENST00000535926 MT4P47944 62 aa4.41□□□□□ -1.7
CHPF-203ENST00000535926 KRTAP20-2Q3LI61 65 aa4.34□□□□□ -1.72
CHPF-203ENST00000535926 KRTAP5-2Q701N4 177 aa4.32□□□□□ -1.72
CHPF-203ENST00000535926 HMCN1Q96RW7 5635 aa4.26□□□□□ -1.73
CHPF-203ENST00000535926 KRTAP20-1Q3LI63 56 aa4.25□□□□□ -1.73
CHPF-203ENST00000535926 LCE4AQ5TA78 99 aa4.24□□□□□ -1.73
CHPF-203ENST00000535926 MUC5ACP98088 5654 aa4.16□□□□□ -1.74
CHPF-203ENST00000535926 KRTAP5-3Q6L8H2 238 aa4.13□□□□□ -1.75
CHPF-203ENST00000535926 LCE1DQ5T752 114 aa4.11□□□□□ -1.75
CHPF-203ENST00000535926 LCE1BQ5T7P3 118 aa3.92□□□□□ -1.78
CHPF-203ENST00000535926 LCE1EQ5T753 118 aa3.91□□□□□ -1.78
CHPF-203ENST00000535926 KRTAP5-10Q6L8G5 202 aa3.88□□□□□ -1.79
CHPF-203ENST00000535926 KRTAP4-11Q9BYQ6 195 aa3.83□□□□□ -1.8
CHPF-203ENST00000535926 KRTAP5-1Q6L8H4 278 aa3.81□□□□□ -1.8
CHPF-203ENST00000535926 KRTAP4-2Q9BYR5 136 aa3.76□□□□□ -1.81
CHPF-203ENST00000535926 LCE1CQ5T751 118 aa3.72□□□□□ -1.81
CHPF-203ENST00000535926 KRTAP21-2Q3LI59 83 aa3.56□□□□□ -1.84
CHPF-203ENST00000535926 KRTAP5-6Q6L8G9 129 aaPredicted RBP3.5□□□□□ -1.85
CHPF-203ENST00000535926 AHNAK2Q8IVF2 5795 aa3.43□□□□□ -1.86
CHPF-203ENST00000535926 KRTAP5-8O75690 187 aa3.41□□□□□ -1.86
CHPF-203ENST00000535926 KRTAP5-7Q6L8G8 165 aa3.33□□□□□ -1.88
CHPF-203ENST00000535926 KRTAP4-4Q9BYR3 166 aa3.28□□□□□ -1.88
CHPF-203ENST00000535926 GPR98Q8WXG9 6306 aa3.19□□□□□ -1.9
CHPF-203ENST00000535926 MUC19Q7Z5P9 8384 aa3.19□□□□□ -1.9
CHPF-203ENST00000535926 KRTAP21-1Q3LI58 79 aa3.17□□□□□ -1.9
CHPF-203ENST00000535926 KRTAP5-11Q6L8G4 156 aa3.17□□□□□ -1.9
CHPF-203ENST00000535926 MUC5BQ9HC84 5762 aaPredicted RBP3.16□□□□□ -1.9
CHPF-203ENST00000535926 LCE1FQ5T754 118 aa3.14□□□□□ -1.91
CHPF-203ENST00000535926 KRTAP4-12Q9BQ66 201 aa3.06□□□□□ -1.92
CHPF-203ENST00000535926 KRTAP9-9Q9BYP9 154 aa2.92□□□□□ -1.94
CHPF-203ENST00000535926 PHGR1C9JFL3 82 aa2.76□□□□□ -1.97
CHPF-203ENST00000535926 AHNAKQ09666 5890 aaKnown RBP2.55□□□□□ -2
CHPF-203ENST00000535926 MUC16Q8WXI7 14507 aa1.85□□□□□ -2.11
Retrieved 77 of 20,778 RNA–protein pairs in 5.4 ms