RNA–Protein interactions for RNA: ENST00000535040.4

TPBG-202, Transcript of trophoblast glycoprotein, humanhuman

APPRIS P1 TSL 2 BASIC

Gene TPBG, Length 3,392 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPBG-202ENST00000535040 KRTAP2-4Q9BYR9 128 aa5.45□□□□□ -1.54
TPBG-202ENST00000535040 KRTAP2-1Q9BYU5 128 aa5.45□□□□□ -1.54
TPBG-202ENST00000535040 SYNE1Q8NF91 8797 aaKnown RBP5.43□□□□□ -1.54
TPBG-202ENST00000535040 KRTAP4-7Q9BYR0 210 aa5.42□□□□□ -1.54
TPBG-202ENST00000535040 MACF1Q9UPN3 7388 aaKnown RBP5.38□□□□□ -1.55
TPBG-202ENST00000535040 MUC12Q9UKN1 5478 aa5.34□□□□□ -1.55
TPBG-202ENST00000535040 MT1LQ93083 61 aa5.32□□□□□ -1.56
TPBG-202ENST00000535040 KRTAP19-4Q3LI73 84 aa5.32□□□□□ -1.56
TPBG-202ENST00000535040 MT1EP04732 61 aa5.29□□□□□ -1.56
TPBG-202ENST00000535040 SYNE2Q8WXH0 6885 aaKnown RBP5.27□□□□□ -1.57
TPBG-202ENST00000535040 KRTAP9-6A0A140TA67 174 aa5.24□□□□□ -1.57
TPBG-202ENST00000535040 SPRR2FQ96RM1 72 aa5.2□□□□□ -1.58
TPBG-202ENST00000535040 KRTAP9-1A8MXZ3 250 aaPredicted RBP5.08□□□□□ -1.6
TPBG-202ENST00000535040 LOC100996750A0A140TA64 210 aa5.05□□□□□ -1.6
TPBG-202ENST00000535040 KRTAP4-3Q9BYR4 195 aa5.04□□□□□ -1.6
TPBG-202ENST00000535040 MDN1Q9NU22 5596 aa5.02□□□□□ -1.61
TPBG-202ENST00000535040 KRTAP19-3Q7Z4W3 81 aa5□□□□□ -1.61
TPBG-202ENST00000535040 MT1GP13640 62 aa4.97□□□□□ -1.61
TPBG-202ENST00000535040 KRTAP5-9P26371 169 aa4.96□□□□□ -1.62
TPBG-202ENST00000535040 MT1MQ8N339 61 aa4.92□□□□□ -1.62
TPBG-202ENST00000535040 SPRR2EP22531 72 aa4.91□□□□□ -1.62
TPBG-202ENST00000535040 SPRR2BP35325 72 aa4.91□□□□□ -1.62
TPBG-202ENST00000535040 SPRR2AP35326 72 aa4.91□□□□□ -1.62
TPBG-202ENST00000535040 KRTAP6-3Q3LI67 103 aa4.89□□□□□ -1.63
TPBG-202ENST00000535040 LCE1AQ5T7P2 110 aa4.88□□□□□ -1.63
TPBG-202ENST00000535040 LCE5AQ5TCM9 118 aa4.88□□□□□ -1.63
TPBG-202ENST00000535040 KRTAP12-4P60329 112 aa4.83□□□□□ -1.64
TPBG-202ENST00000535040 KRTAP9-7A8MTY7 169 aa4.82□□□□□ -1.64
TPBG-202ENST00000535040 SPRR2DP22532 72 aa4.72□□□□□ -1.65
TPBG-202ENST00000535040 LCE3BQ5TA77 95 aa4.64□□□□□ -1.67
TPBG-202ENST00000535040 KRTAP4-9Q9BYQ8 210 aa4.64□□□□□ -1.67
TPBG-202ENST00000535040 NEBP20929 6669 aa4.63□□□□□ -1.67
TPBG-202ENST00000535040 MT1AP04731 61 aa4.56□□□□□ -1.68
TPBG-202ENST00000535040 KRTAP6-1Q3LI64 71 aa4.52□□□□□ -1.69
TPBG-202ENST00000535040 LCE3DQ9BYE3 92 aa4.43□□□□□ -1.7
TPBG-202ENST00000535040 LCE3EQ5T5B0 92 aa4.39□□□□□ -1.71
TPBG-202ENST00000535040 KRTAP5-5Q701N2 237 aaPredicted RBP4.39□□□□□ -1.71
TPBG-202ENST00000535040 PRM1P04553 51 aa4.3□□□□□ -1.72
TPBG-202ENST00000535040 KRTAP2-2Q9BYT5 123 aa4.29□□□□□ -1.72
TPBG-202ENST00000535040 KRTAP20-1Q3LI63 56 aa4.26□□□□□ -1.73
TPBG-202ENST00000535040 MT4P47944 62 aa4.17□□□□□ -1.74
TPBG-202ENST00000535040 KRTAP9-4Q9BYQ2 154 aa4.17□□□□□ -1.74
TPBG-202ENST00000535040 KRTAP6-2Q3LI66 62 aa4.13□□□□□ -1.75
TPBG-202ENST00000535040 KRTAP5-4Q6L8H1 288 aa4.13□□□□□ -1.75
TPBG-202ENST00000535040 KRTAP4-6Q9BYQ5 205 aa4.08□□□□□ -1.76
TPBG-202ENST00000535040 LCE1EQ5T753 118 aa4.08□□□□□ -1.76
TPBG-202ENST00000535040 LCE4AQ5TA78 99 aa4.07□□□□□ -1.76
TPBG-202ENST00000535040 LCE1DQ5T752 114 aa4.02□□□□□ -1.77
TPBG-202ENST00000535040 HMCN1Q96RW7 5635 aa4.01□□□□□ -1.77
TPBG-202ENST00000535040 MT3P25713 68 aa3.96□□□□□ -1.78
TPBG-202ENST00000535040 KRTAP20-2Q3LI61 65 aa3.94□□□□□ -1.78
TPBG-202ENST00000535040 MUC19Q7Z5P9 8384 aa3.87□□□□□ -1.79
TPBG-202ENST00000535040 KRTAP5-3Q6L8H2 238 aa3.74□□□□□ -1.81
TPBG-202ENST00000535040 KRTAP5-2Q701N4 177 aa3.74□□□□□ -1.81
TPBG-202ENST00000535040 LCE1FQ5T754 118 aa3.65□□□□□ -1.83
TPBG-202ENST00000535040 AHNAK2Q8IVF2 5795 aa3.49□□□□□ -1.85
TPBG-202ENST00000535040 LCE1BQ5T7P3 118 aa3.46□□□□□ -1.86
TPBG-202ENST00000535040 MUC5ACP98088 5654 aa3.44□□□□□ -1.86
TPBG-202ENST00000535040 KRTAP4-11Q9BYQ6 195 aa3.42□□□□□ -1.86
TPBG-202ENST00000535040 KRTAP5-1Q6L8H4 278 aa3.28□□□□□ -1.89
TPBG-202ENST00000535040 KRTAP5-8O75690 187 aa3.26□□□□□ -1.89
TPBG-202ENST00000535040 KRTAP5-10Q6L8G5 202 aa3.26□□□□□ -1.89
TPBG-202ENST00000535040 GPR98Q8WXG9 6306 aa3.21□□□□□ -1.9
TPBG-202ENST00000535040 KRTAP4-2Q9BYR5 136 aa3.16□□□□□ -1.9
TPBG-202ENST00000535040 LCE1CQ5T751 118 aa3.11□□□□□ -1.91
TPBG-202ENST00000535040 KRTAP5-7Q6L8G8 165 aa3.06□□□□□ -1.92
TPBG-202ENST00000535040 MUC5BQ9HC84 5762 aaPredicted RBP3.02□□□□□ -1.93
TPBG-202ENST00000535040 KRTAP4-4Q9BYR3 166 aa3.02□□□□□ -1.93
TPBG-202ENST00000535040 KRTAP9-9Q9BYP9 154 aa2.98□□□□□ -1.93
TPBG-202ENST00000535040 KRTAP21-2Q3LI59 83 aa2.92□□□□□ -1.94
TPBG-202ENST00000535040 KRTAP5-6Q6L8G9 129 aaPredicted RBP2.89□□□□□ -1.95
TPBG-202ENST00000535040 KRTAP4-12Q9BQ66 201 aa2.86□□□□□ -1.95
TPBG-202ENST00000535040 KRTAP21-1Q3LI58 79 aa2.75□□□□□ -1.97
TPBG-202ENST00000535040 KRTAP5-11Q6L8G4 156 aa2.74□□□□□ -1.97
TPBG-202ENST00000535040 AHNAKQ09666 5890 aaKnown RBP2.62□□□□□ -1.99
TPBG-202ENST00000535040 PHGR1C9JFL3 82 aa2.37□□□□□ -2.03
TPBG-202ENST00000535040 MUC16Q8WXI7 14507 aa1.52□□□□□ -2.17
Retrieved 77 of 20,778 RNA–protein pairs in 153.3 ms