RNA–Protein interactions for RNA: ENST00000534938.6

FCF1-202, Transcript of FCF1, rRNA-processing protein, humanhuman

TSL 3 BASIC

Gene FCF1, Length 794 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FCF1-202ENST00000534938 MT1MQ8N339 61 aa3.6□□□□□ -1.83
FCF1-202ENST00000534938 V9GYY9 64 aa3.58□□□□□ -1.84
FCF1-202ENST00000534938 KRTAP5-2Q701N4 177 aa3.56□□□□□ -1.84
FCF1-202ENST00000534938 AHNAK2Q8IVF2 5795 aa3.54□□□□□ -1.84
FCF1-202ENST00000534938 MT1LQ93083 61 aa3.53□□□□□ -1.84
FCF1-202ENST00000534938 KRTAP13-4Q3LI77 160 aa3.52□□□□□ -1.85
FCF1-202ENST00000534938 SPINT4Q6UDR6 99 aa3.52□□□□□ -1.85
FCF1-202ENST00000534938 KRTAP4-3Q9BYR4 195 aa3.49□□□□□ -1.85
FCF1-202ENST00000534938 OBSCNQ5VST9 7968 aa3.48□□□□□ -1.85
FCF1-202ENST00000534938 SERP1Q9Y6X1 66 aa3.47□□□□□ -1.85
FCF1-202ENST00000534938 LOC105371267A0A1B0GV96 52 aa3.46□□□□□ -1.86
FCF1-202ENST00000534938 KRTAP12-4P60329 112 aa3.44□□□□□ -1.86
FCF1-202ENST00000534938 KRTAP20-2Q3LI61 65 aa3.44□□□□□ -1.86
FCF1-202ENST00000534938 C10orf95Q9H7T3 257 aa3.44□□□□□ -1.86
FCF1-202ENST00000534938 SMIM20Q8N5G0 67 aa3.42□□□□□ -1.86
FCF1-202ENST00000534938 SMIM26A0A096LP01 95 aa3.4□□□□□ -1.87
FCF1-202ENST00000534938 TNP1P09430 55 aa3.4□□□□□ -1.87
FCF1-202ENST00000534938 J3QR89 54 aa3.39□□□□□ -1.87
FCF1-202ENST00000534938 SPATA8Q6RVD6 105 aa3.39□□□□□ -1.87
FCF1-202ENST00000534938 LCE1FQ5T754 118 aa3.38□□□□□ -1.87
FCF1-202ENST00000534938 LCE3AQ5TA76 89 aa3.37□□□□□ -1.87
FCF1-202ENST00000534938 A0A1B0GU33 70 aa3.36□□□□□ -1.87
FCF1-202ENST00000534938 SPANXA2-OT1Q8N9U9 137 aa3.35□□□□□ -1.87
FCF1-202ENST00000534938 KRTAP12-1P59990 96 aa3.34□□□□□ -1.87
FCF1-202ENST00000534938 SNURFQ9Y675 71 aa3.33□□□□□ -1.88
FCF1-202ENST00000534938 PSPHP1O15172 72 aa3.31□□□□□ -1.88
FCF1-202ENST00000534938 KRTAP12-3P60328 96 aa3.28□□□□□ -1.88
FCF1-202ENST00000534938 KRTAP5-5Q701N2 237 aaPredicted RBP3.28□□□□□ -1.88
FCF1-202ENST00000534938 COA5Q86WW8 74 aa3.27□□□□□ -1.89
FCF1-202ENST00000534938 PRO0628Q9UI54 55 aa3.26□□□□□ -1.89
FCF1-202ENST00000534938 KRTAP9-6A8MVA2 160 aa3.24□□□□□ -1.89
FCF1-202ENST00000534938 SERP2Q8N6R1 65 aa3.24□□□□□ -1.89
FCF1-202ENST00000534938 A0A1B0GU69 56 aa3.2□□□□□ -1.9
FCF1-202ENST00000534938 A8MU10 97 aa3.17□□□□□ -1.9
FCF1-202ENST00000534938 A0A1B0GV90 55 aa3.16□□□□□ -1.9
FCF1-202ENST00000534938 LCE3CQ5T5A8 94 aa3.16□□□□□ -1.9
FCF1-202ENST00000534938 ANAPC13Q9BS18 74 aa3.16□□□□□ -1.9
FCF1-202ENST00000534938 LUZP6Q538Z0 58 aa3.13□□□□□ -1.91
FCF1-202ENST00000534938 KRTAP5-8O75690 187 aa3.12□□□□□ -1.91
FCF1-202ENST00000534938 MUC5ACP98088 5654 aa3.06□□□□□ -1.92
FCF1-202ENST00000534938 PRR15LQ9BU68 103 aa3.06□□□□□ -1.92
FCF1-202ENST00000534938 K7ERU9 68 aa3.05□□□□□ -1.92
FCF1-202ENST00000534938 KRTAP25-1Q3LHN0 102 aa3.05□□□□□ -1.92
FCF1-202ENST00000534938 AHNAKQ09666 5890 aaKnown RBP3.03□□□□□ -1.92
FCF1-202ENST00000534938 MT1AP04731 61 aa3.02□□□□□ -1.93
FCF1-202ENST00000534938 SYNE1Q8NF91 8797 aaKnown RBP2.99□□□□□ -1.93
FCF1-202ENST00000534938 K7ERS5 55 aa2.99□□□□□ -1.93
FCF1-202ENST00000534938 KRTAP6-1Q3LI64 71 aa2.99□□□□□ -1.93
FCF1-202ENST00000534938 KRTAP6-2Q3LI66 62 aa2.96□□□□□ -1.94
FCF1-202ENST00000534938 H7BZZ5 65 aa2.94□□□□□ -1.94
FCF1-202ENST00000534938 A6NED7 52 aa2.92□□□□□ -1.94
FCF1-202ENST00000534938 COX7CP15954 63 aa2.92□□□□□ -1.94
FCF1-202ENST00000534938 MUC5BQ9HC84 5762 aaPredicted RBP2.92□□□□□ -1.94
FCF1-202ENST00000534938 UQCR11O14957 56 aa2.89□□□□□ -1.95
FCF1-202ENST00000534938 PMAIP1Q13794 54 aa2.89□□□□□ -1.95
FCF1-202ENST00000534938 LCE3EQ5T5B0 92 aa2.88□□□□□ -1.95
FCF1-202ENST00000534938 LINC01558Q9Y6Z2 57 aa2.8□□□□□ -1.96
FCF1-202ENST00000534938 MIR22HGQ0VDD5 57 aa2.77□□□□□ -1.97
FCF1-202ENST00000534938 RPS28P62857 69 aaKnown RBP2.75□□□□□ -1.97
FCF1-202ENST00000534938 ATP5EP56381 51 aaPredicted RBP2.74□□□□□ -1.97
FCF1-202ENST00000534938 CDC42SE1Q9NRR8 79 aa2.64□□□□□ -1.99
FCF1-202ENST00000534938 LCE1BQ5T7P3 118 aa2.56□□□□□ -2
FCF1-202ENST00000534938 CCDC179H3BU77 68 aa2.54□□□□□ -2
FCF1-202ENST00000534938 Q1T7F1 81 aa2.54□□□□□ -2
FCF1-202ENST00000534938 KTN1-AS1Q86SY8 53 aa2.53□□□□□ -2
FCF1-202ENST00000534938 ROMO1P60602 79 aa2.52□□□□□ -2.01
FCF1-202ENST00000534938 TMEM258P61165 79 aa2.5□□□□□ -2.01
FCF1-202ENST00000534938 LCE1CQ5T751 118 aa2.46□□□□□ -2.02
FCF1-202ENST00000534938 LCE3DQ9BYE3 92 aa2.39□□□□□ -2.03
FCF1-202ENST00000534938 PHGR1C9JFL3 82 aa2.25□□□□□ -2.05
FCF1-202ENST00000534938 BRK1Q8WUW1 75 aa2.24□□□□□ -2.05
FCF1-202ENST00000534938 MUC19Q7Z5P9 8384 aa2.17□□□□□ -2.06
FCF1-202ENST00000534938 INE1O15225 51 aa1.97□□□□□ -2.09
FCF1-202ENST00000534938 KRTAP21-2Q3LI59 83 aa1.95□□□□□ -2.1
FCF1-202ENST00000534938 KRTAP21-1Q3LI58 79 aa1.73□□□□□ -2.13
FCF1-202ENST00000534938 PRM1P04553 51 aa1.25□□□□□ -2.21
FCF1-202ENST00000534938 MUC16Q8WXI7 14507 aa1.25□□□□□ -2.21
Retrieved 77 of 20,778 RNA–protein pairs in 168.5 ms