RNA–Protein interactions for RNA: ENST00000534839.1

TNC-209, Transcript of tenascin C, humanhuman

TSL 3

Gene TNC, Length 734 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TNC-209ENST00000534839 CCDC179H3BU77 68 aa4.19□□□□□ -1.74
TNC-209ENST00000534839 H7BZZ5 65 aa4.19□□□□□ -1.74
TNC-209ENST00000534839 P0C880 135 aa4.19□□□□□ -1.74
TNC-209ENST00000534839 KRTAP5-4Q6L8H1 288 aa4.19□□□□□ -1.74
TNC-209ENST00000534839 AHNAKQ09666 5890 aaKnown RBP4.19□□□□□ -1.74
TNC-209ENST00000534839 COA5Q86WW8 74 aa4.18□□□□□ -1.74
TNC-209ENST00000534839 R4GN34 69 aa4.16□□□□□ -1.74
TNC-209ENST00000534839 M0QZ58 72 aa4.14□□□□□ -1.75
TNC-209ENST00000534839 LINC01554Q52M75 96 aa4.12□□□□□ -1.75
TNC-209ENST00000534839 SEC61GP60059 68 aa4.09□□□□□ -1.75
TNC-209ENST00000534839 MT1XP80297 61 aa4.07□□□□□ -1.76
TNC-209ENST00000534839 PLAC4Q8WY50 150 aa4.07□□□□□ -1.76
TNC-209ENST00000534839 SERP1Q9Y6X1 66 aa4.07□□□□□ -1.76
TNC-209ENST00000534839 ATP5EP56381 51 aaPredicted RBP4.05□□□□□ -1.76
TNC-209ENST00000534839 MUC5BQ9HC84 5762 aaPredicted RBP4.05□□□□□ -1.76
TNC-209ENST00000534839 PRO2289Q9P1D8 64 aa4.04□□□□□ -1.76
TNC-209ENST00000534839 MUC5ACP98088 5654 aa4.04□□□□□ -1.76
TNC-209ENST00000534839 LCE3AQ5TA76 89 aa4.03□□□□□ -1.76
TNC-209ENST00000534839 TMEM258P61165 79 aa4.01□□□□□ -1.77
TNC-209ENST00000534839 A0A1B0GU69 56 aa3.99□□□□□ -1.77
TNC-209ENST00000534839 A0A1B0GU33 70 aa3.97□□□□□ -1.77
TNC-209ENST00000534839 KRTAP13-4Q3LI77 160 aa3.97□□□□□ -1.77
TNC-209ENST00000534839 A0A0D9SG42 100 aa3.95□□□□□ -1.78
TNC-209ENST00000534839 SPATA8Q6RVD6 105 aa3.95□□□□□ -1.78
TNC-209ENST00000534839 OBSCNQ5VST9 7968 aa3.94□□□□□ -1.78
TNC-209ENST00000534839 PRR15LQ9BU68 103 aa3.92□□□□□ -1.78
TNC-209ENST00000534839 CAMK2N1Q7Z7J9 78 aa3.89□□□□□ -1.79
TNC-209ENST00000534839 SPINT4Q6UDR6 99 aa3.88□□□□□ -1.79
TNC-209ENST00000534839 LINC01558Q9Y6Z2 57 aa3.88□□□□□ -1.79
TNC-209ENST00000534839 SMIM26A0A096LP01 95 aa3.85□□□□□ -1.79
TNC-209ENST00000534839 KRTAP4-3Q9BYR4 195 aa3.82□□□□□ -1.8
TNC-209ENST00000534839 KRTAP19-3Q7Z4W3 81 aa3.81□□□□□ -1.8
TNC-209ENST00000534839 KRTAP12-1P59990 96 aa3.79□□□□□ -1.8
TNC-209ENST00000534839 KRTAP20-2Q3LI61 65 aa3.79□□□□□ -1.8
TNC-209ENST00000534839 UQCR11O14957 56 aa3.78□□□□□ -1.8
TNC-209ENST00000534839 PSPHP1O15172 72 aa3.78□□□□□ -1.8
TNC-209ENST00000534839 V9GYY9 64 aa3.78□□□□□ -1.8
TNC-209ENST00000534839 Q1T7F1 81 aa3.75□□□□□ -1.81
TNC-209ENST00000534839 KRTAP5-5Q701N2 237 aaPredicted RBP3.74□□□□□ -1.81
TNC-209ENST00000534839 MIR22HGQ0VDD5 57 aa3.72□□□□□ -1.81
TNC-209ENST00000534839 RPS28P62857 69 aaKnown RBP3.71□□□□□ -1.82
TNC-209ENST00000534839 KRTAP5-8O75690 187 aa3.7□□□□□ -1.82
TNC-209ENST00000534839 LCE3DQ9BYE3 92 aa3.67□□□□□ -1.82
TNC-209ENST00000534839 A6NED7 52 aa3.66□□□□□ -1.82
TNC-209ENST00000534839 MT1EP04732 61 aa3.66□□□□□ -1.82
TNC-209ENST00000534839 KRTAP19-7Q3SYF9 63 aa3.66□□□□□ -1.82
TNC-209ENST00000534839 K7ERS5 55 aa3.65□□□□□ -1.83
TNC-209ENST00000534839 C10orf95Q9H7T3 257 aa3.62□□□□□ -1.83
TNC-209ENST00000534839 TNP1P09430 55 aa3.6□□□□□ -1.83
TNC-209ENST00000534839 MT1GP13640 62 aa3.6□□□□□ -1.83
TNC-209ENST00000534839 PRO0628Q9UI54 55 aa3.58□□□□□ -1.84
TNC-209ENST00000534839 MT1MQ8N339 61 aa3.56□□□□□ -1.84
TNC-209ENST00000534839 PP632Q6XCG6 107 aa3.54□□□□□ -1.84
TNC-209ENST00000534839 SYNE1Q8NF91 8797 aaKnown RBP3.52□□□□□ -1.85
TNC-209ENST00000534839 KRTAP19-5Q3LI72 72 aa3.49□□□□□ -1.85
TNC-209ENST00000534839 CDC42SE1Q9NRR8 79 aa3.48□□□□□ -1.85
TNC-209ENST00000534839 KRTAP25-1Q3LHN0 102 aa3.46□□□□□ -1.86
TNC-209ENST00000534839 LCE1CQ5T751 118 aa3.46□□□□□ -1.86
TNC-209ENST00000534839 LCE1BQ5T7P3 118 aa3.46□□□□□ -1.86
TNC-209ENST00000534839 KRTAP12-4P60329 112 aa3.45□□□□□ -1.86
TNC-209ENST00000534839 KRTAP5-2Q701N4 177 aa3.45□□□□□ -1.86
TNC-209ENST00000534839 PMAIP1Q13794 54 aa3.42□□□□□ -1.86
TNC-209ENST00000534839 ROMO1P60602 79 aa3.41□□□□□ -1.86
TNC-209ENST00000534839 KRTAP12-3P60328 96 aa3.37□□□□□ -1.87
TNC-209ENST00000534839 BRK1Q8WUW1 75 aa3.36□□□□□ -1.87
TNC-209ENST00000534839 MT1LQ93083 61 aa3.34□□□□□ -1.87
TNC-209ENST00000534839 KTN1-AS1Q86SY8 53 aa3.2□□□□□ -1.9
TNC-209ENST00000534839 KRTAP6-2Q3LI66 62 aa2.94□□□□□ -1.94
TNC-209ENST00000534839 KRTAP6-1Q3LI64 71 aa2.88□□□□□ -1.95
TNC-209ENST00000534839 MUC19Q7Z5P9 8384 aa2.84□□□□□ -1.95
TNC-209ENST00000534839 MT1AP04731 61 aa2.83□□□□□ -1.96
TNC-209ENST00000534839 LUZP6Q538Z0 58 aa2.78□□□□□ -1.96
TNC-209ENST00000534839 PHGR1C9JFL3 82 aa2.75□□□□□ -1.97
TNC-209ENST00000534839 KRTAP21-2Q3LI59 83 aa2.49□□□□□ -2.01
TNC-209ENST00000534839 INE1O15225 51 aa2.31□□□□□ -2.04
TNC-209ENST00000534839 KRTAP21-1Q3LI58 79 aa2.07□□□□□ -2.08
TNC-209ENST00000534839 PRM1P04553 51 aa1.76□□□□□ -2.13
TNC-209ENST00000534839 MUC16Q8WXI7 14507 aa1.4□□□□□ -2.18
Retrieved 78 of 20,778 RNA–protein pairs in 54.8 ms