RNA–Protein interactions for RNA: ENST00000534716.2

NDUFS3-213, Transcript of NADH:ubiquinone oxidoreductase core subunit S3, humanhuman

TSL 2 BASIC

Gene NDUFS3, Length 1,263 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NDUFS3-213ENST00000534716 LCE3AQ5TA76 89 aa6.61□□□□□ -1.35
NDUFS3-213ENST00000534716 TNP1P09430 55 aa6.59□□□□□ -1.35
NDUFS3-213ENST00000534716 C10orf95Q9H7T3 257 aa6.59□□□□□ -1.35
NDUFS3-213ENST00000534716 KRTAP5-4Q6L8H1 288 aa6.53□□□□□ -1.36
NDUFS3-213ENST00000534716 KRTAP4-3Q9BYR4 195 aa6.51□□□□□ -1.37
NDUFS3-213ENST00000534716 KRTAP5-7Q6L8G8 165 aa6.5□□□□□ -1.37
NDUFS3-213ENST00000534716 ANAPC13Q9BS18 74 aa6.49□□□□□ -1.37
NDUFS3-213ENST00000534716 PRR15LQ9BU68 103 aa6.47□□□□□ -1.37
NDUFS3-213ENST00000534716 KRTAP9-9Q9BYP9 154 aa6.43□□□□□ -1.38
NDUFS3-213ENST00000534716 KRTAP9-4Q9BYQ2 154 aa6.43□□□□□ -1.38
NDUFS3-213ENST00000534716 ATP5EP56381 51 aaPredicted RBP6.42□□□□□ -1.38
NDUFS3-213ENST00000534716 SPRR5A0A1B0GTR4 108 aa6.4□□□□□ -1.38
NDUFS3-213ENST00000534716 CCDC179H3BU77 68 aa6.39□□□□□ -1.39
NDUFS3-213ENST00000534716 LINC01558Q9Y6Z2 57 aa6.39□□□□□ -1.39
NDUFS3-213ENST00000534716 KRTAP12-3P60328 96 aa6.38□□□□□ -1.39
NDUFS3-213ENST00000534716 KRTAP5-3Q6L8H2 238 aa6.34□□□□□ -1.39
NDUFS3-213ENST00000534716 KRTAP4-7Q9BYR0 210 aa6.32□□□□□ -1.4
NDUFS3-213ENST00000534716 UQCR11O14957 56 aa6.26□□□□□ -1.41
NDUFS3-213ENST00000534716 KRTAP5-5Q701N2 237 aaPredicted RBP6.2□□□□□ -1.42
NDUFS3-213ENST00000534716 KRTAP25-1Q3LHN0 102 aa6.17□□□□□ -1.42
NDUFS3-213ENST00000534716 TMEM258P61165 79 aa6.16□□□□□ -1.42
NDUFS3-213ENST00000534716 KRTAP19-4Q3LI73 84 aa6.15□□□□□ -1.42
NDUFS3-213ENST00000534716 KRTAP20-2Q3LI61 65 aa6.13□□□□□ -1.43
NDUFS3-213ENST00000534716 MIR22HGQ0VDD5 57 aa6.09□□□□□ -1.43
NDUFS3-213ENST00000534716 KRTAP12-4P60329 112 aa6.05□□□□□ -1.44
NDUFS3-213ENST00000534716 SYNE1Q8NF91 8797 aaKnown RBP6.01□□□□□ -1.45
NDUFS3-213ENST00000534716 K7ERS5 55 aa6□□□□□ -1.45
NDUFS3-213ENST00000534716 KRTAP23-1A1A580 65 aa5.98□□□□□ -1.45
NDUFS3-213ENST00000534716 KRTAP15-1Q3LI76 137 aa5.91□□□□□ -1.46
NDUFS3-213ENST00000534716 V9GYY9 64 aa5.89□□□□□ -1.47
NDUFS3-213ENST00000534716 LCE3CQ5T5A8 94 aa5.86□□□□□ -1.47
NDUFS3-213ENST00000534716 KRTAP4-2Q9BYR5 136 aa5.86□□□□□ -1.47
NDUFS3-213ENST00000534716 Q1T7F1 81 aa5.85□□□□□ -1.47
NDUFS3-213ENST00000534716 PSPHP1O15172 72 aa5.84□□□□□ -1.47
NDUFS3-213ENST00000534716 SVIPQ8NHG7 77 aa5.78□□□□□ -1.48
NDUFS3-213ENST00000534716 KRTAP4-11Q9BYQ6 195 aa5.76□□□□□ -1.49
NDUFS3-213ENST00000534716 AHNAKQ09666 5890 aaKnown RBP5.75□□□□□ -1.49
NDUFS3-213ENST00000534716 MUC5ACP98088 5654 aa5.69□□□□□ -1.5
NDUFS3-213ENST00000534716 MT1AP04731 61 aa5.69□□□□□ -1.5
NDUFS3-213ENST00000534716 KRTAP5-2Q701N4 177 aa5.69□□□□□ -1.5
NDUFS3-213ENST00000534716 CDC42SE1Q9NRR8 79 aa5.66□□□□□ -1.5
NDUFS3-213ENST00000534716 KRTAP6-1Q3LI64 71 aa5.65□□□□□ -1.5
NDUFS3-213ENST00000534716 A6NED7 52 aa5.64□□□□□ -1.51
NDUFS3-213ENST00000534716 MUC5BQ9HC84 5762 aaPredicted RBP5.62□□□□□ -1.51
NDUFS3-213ENST00000534716 ROMO1P60602 79 aa5.58□□□□□ -1.52
NDUFS3-213ENST00000534716 RPS28P62857 69 aaKnown RBP5.55□□□□□ -1.52
NDUFS3-213ENST00000534716 KRTAP9-6A8MVA2 160 aa5.54□□□□□ -1.52
NDUFS3-213ENST00000534716 KRTAP5-8O75690 187 aa5.53□□□□□ -1.52
NDUFS3-213ENST00000534716 PCP4P48539 62 aa5.43□□□□□ -1.54
NDUFS3-213ENST00000534716 KRTAP6-2Q3LI66 62 aa5.43□□□□□ -1.54
NDUFS3-213ENST00000534716 OBSCNQ5VST9 7968 aa5.39□□□□□ -1.55
NDUFS3-213ENST00000534716 MT3P25713 68 aa5.23□□□□□ -1.57
NDUFS3-213ENST00000534716 KRTAP5-1Q6L8H4 278 aa5.13□□□□□ -1.59
NDUFS3-213ENST00000534716 A0A0A0MQY5 61 aa4.99□□□□□ -1.61
NDUFS3-213ENST00000534716 LCE1EQ5T753 118 aa4.88□□□□□ -1.63
NDUFS3-213ENST00000534716 BRK1Q8WUW1 75 aa4.75□□□□□ -1.65
NDUFS3-213ENST00000534716 LCE1CQ5T751 118 aa4.52□□□□□ -1.69
NDUFS3-213ENST00000534716 LCE1BQ5T7P3 118 aa4.52□□□□□ -1.69
NDUFS3-213ENST00000534716 PMAIP1Q13794 54 aa4.45□□□□□ -1.7
NDUFS3-213ENST00000534716 PRAC1Q96KF2 57 aa4.29□□□□□ -1.72
NDUFS3-213ENST00000534716 PRO0628Q9UI54 55 aa4.24□□□□□ -1.73
NDUFS3-213ENST00000534716 LCE3DQ9BYE3 92 aa4.19□□□□□ -1.74
NDUFS3-213ENST00000534716 KRTAP5-6Q6L8G9 129 aaPredicted RBP4.18□□□□□ -1.74
NDUFS3-213ENST00000534716 KRTAP5-11Q6L8G4 156 aa4.1□□□□□ -1.75
NDUFS3-213ENST00000534716 KTN1-AS1Q86SY8 53 aa4.05□□□□□ -1.76
NDUFS3-213ENST00000534716 LCE1FQ5T754 118 aa4.04□□□□□ -1.76
NDUFS3-213ENST00000534716 PHGR1C9JFL3 82 aa3.97□□□□□ -1.77
NDUFS3-213ENST00000534716 LCE3EQ5T5B0 92 aa3.91□□□□□ -1.78
NDUFS3-213ENST00000534716 NDUFAF8A1L188 74 aa3.81□□□□□ -1.8
NDUFS3-213ENST00000534716 KRTAP21-2Q3LI59 83 aa3.76□□□□□ -1.81
NDUFS3-213ENST00000534716 LUZP6Q538Z0 58 aa3.6□□□□□ -1.83
NDUFS3-213ENST00000534716 KRTAP4-4Q9BYR3 166 aa3.43□□□□□ -1.86
NDUFS3-213ENST00000534716 MUC19Q7Z5P9 8384 aa3.33□□□□□ -1.88
NDUFS3-213ENST00000534716 KRTAP21-1Q3LI58 79 aa3.01□□□□□ -1.93
NDUFS3-213ENST00000534716 PRM1P04553 51 aa2.81□□□□□ -1.96
NDUFS3-213ENST00000534716 MUC16Q8WXI7 14507 aa2.42□□□□□ -2.02
NDUFS3-213ENST00000534716 INE1O15225 51 aa2.4□□□□□ -2.03
Retrieved 77 of 20,778 RNA–protein pairs in 90.7 ms