RNA–Protein interactions for RNA: ENST00000534602.5

GSDMD-216, Transcript of gasdermin D, humanhuman

TSL 2

Gene GSDMD, Length 480 nt, Biotype retained intron, Subcellular localisation Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GSDMD-216ENST00000534602 HMCN1Q96RW7 5635 aa7.44□□□□□ -1.22
GSDMD-216ENST00000534602 MT4P47944 62 aa7.42□□□□□ -1.22
GSDMD-216ENST00000534602 KRTAP4-3Q9BYR4 195 aa7.42□□□□□ -1.22
GSDMD-216ENST00000534602 LINC01558Q9Y6Z2 57 aa7.42□□□□□ -1.22
GSDMD-216ENST00000534602 KRTAP5-4Q6L8H1 288 aa7.4□□□□□ -1.22
GSDMD-216ENST00000534602 KRTAP12-3P60328 96 aa7.31□□□□□ -1.24
GSDMD-216ENST00000534602 UQCR11O14957 56 aa7.28□□□□□ -1.24
GSDMD-216ENST00000534602 KRTAP4-6Q9BYQ5 205 aa7.22□□□□□ -1.25
GSDMD-216ENST00000534602 TMEM258P61165 79 aa7.21□□□□□ -1.26
GSDMD-216ENST00000534602 KRTAP4-7Q9BYR0 210 aa7.21□□□□□ -1.26
GSDMD-216ENST00000534602 AHNAK2Q8IVF2 5795 aa7.18□□□□□ -1.26
GSDMD-216ENST00000534602 KRTAP25-1Q3LHN0 102 aa7.13□□□□□ -1.27
GSDMD-216ENST00000534602 KRTAP5-10Q6L8G5 202 aa7.1□□□□□ -1.27
GSDMD-216ENST00000534602 MIR22HGQ0VDD5 57 aa7.08□□□□□ -1.28
GSDMD-216ENST00000534602 KRTAP5-5Q701N2 237 aaPredicted RBP7.04□□□□□ -1.28
GSDMD-216ENST00000534602 K7ERS5 55 aa7□□□□□ -1.29
GSDMD-216ENST00000534602 KRTAP19-4Q3LI73 84 aa6.99□□□□□ -1.29
GSDMD-216ENST00000534602 KRTAP20-2Q3LI61 65 aa6.96□□□□□ -1.3
GSDMD-216ENST00000534602 SPRR5A0A1B0GTR4 108 aa6.95□□□□□ -1.3
GSDMD-216ENST00000534602 KRTAP5-3Q6L8H2 238 aa6.91□□□□□ -1.3
GSDMD-216ENST00000534602 KRTAP12-4P60329 112 aa6.9□□□□□ -1.3
GSDMD-216ENST00000534602 KRTAP23-1A1A580 65 aa6.89□□□□□ -1.31
GSDMD-216ENST00000534602 V9GYY9 64 aa6.89□□□□□ -1.31
GSDMD-216ENST00000534602 KRTAP5-7Q6L8G8 165 aa6.86□□□□□ -1.31
GSDMD-216ENST00000534602 LOC100996750A0A140TA64 210 aa6.84□□□□□ -1.31
GSDMD-216ENST00000534602 PSPHP1O15172 72 aa6.82□□□□□ -1.32
GSDMD-216ENST00000534602 Q1T7F1 81 aa6.82□□□□□ -1.32
GSDMD-216ENST00000534602 KRTAP15-1Q3LI76 137 aa6.79□□□□□ -1.32
GSDMD-216ENST00000534602 LCE3CQ5T5A8 94 aa6.72□□□□□ -1.33
GSDMD-216ENST00000534602 SYNE1Q8NF91 8797 aaKnown RBP6.72□□□□□ -1.33
GSDMD-216ENST00000534602 A6NED7 52 aa6.61□□□□□ -1.35
GSDMD-216ENST00000534602 CDC42SE1Q9NRR8 79 aa6.59□□□□□ -1.35
GSDMD-216ENST00000534602 MT1AP04731 61 aa6.51□□□□□ -1.37
GSDMD-216ENST00000534602 ROMO1P60602 79 aa6.48□□□□□ -1.37
GSDMD-216ENST00000534602 RPS28P62857 69 aaKnown RBP6.45□□□□□ -1.38
GSDMD-216ENST00000534602 KRTAP5-2Q701N4 177 aa6.45□□□□□ -1.38
GSDMD-216ENST00000534602 KRTAP6-1Q3LI64 71 aa6.44□□□□□ -1.38
GSDMD-216ENST00000534602 KRTAP4-11Q9BYQ6 195 aa6.4□□□□□ -1.38
GSDMD-216ENST00000534602 KRTAP9-6A8MVA2 160 aa6.32□□□□□ -1.4
GSDMD-216ENST00000534602 KRTAP9-4Q9BYQ2 154 aa6.31□□□□□ -1.4
GSDMD-216ENST00000534602 KRTAP6-2Q3LI66 62 aa6.19□□□□□ -1.42
GSDMD-216ENST00000534602 KRTAP5-8O75690 187 aa6.18□□□□□ -1.42
GSDMD-216ENST00000534602 OBSCNQ5VST9 7968 aa6.05□□□□□ -1.44
GSDMD-216ENST00000534602 MT3P25713 68 aa5.97□□□□□ -1.45
GSDMD-216ENST00000534602 MUC5ACP98088 5654 aa5.97□□□□□ -1.45
GSDMD-216ENST00000534602 AHNAKQ09666 5890 aaKnown RBP5.96□□□□□ -1.45
GSDMD-216ENST00000534602 PCP4P48539 62 aa5.95□□□□□ -1.46
GSDMD-216ENST00000534602 MUC5BQ9HC84 5762 aaPredicted RBP5.95□□□□□ -1.46
GSDMD-216ENST00000534602 KRTAP9-9Q9BYP9 154 aa5.89□□□□□ -1.47
GSDMD-216ENST00000534602 KRTAP5-1Q6L8H4 278 aa5.8□□□□□ -1.48
GSDMD-216ENST00000534602 LCE1EQ5T753 118 aa5.55□□□□□ -1.52
GSDMD-216ENST00000534602 BRK1Q8WUW1 75 aa5.44□□□□□ -1.54
GSDMD-216ENST00000534602 KRTAP4-2Q9BYR5 136 aa5.21□□□□□ -1.58
GSDMD-216ENST00000534602 LCE1BQ5T7P3 118 aa5.16□□□□□ -1.58
GSDMD-216ENST00000534602 LCE1CQ5T751 118 aa5.14□□□□□ -1.59
GSDMD-216ENST00000534602 PMAIP1Q13794 54 aa5.12□□□□□ -1.59
GSDMD-216ENST00000534602 PRAC1Q96KF2 57 aa4.94□□□□□ -1.62
GSDMD-216ENST00000534602 LCE3DQ9BYE3 92 aa4.82□□□□□ -1.64
GSDMD-216ENST00000534602 KRTAP4-12Q9BQ66 201 aa4.72□□□□□ -1.65
GSDMD-216ENST00000534602 KRTAP5-6Q6L8G9 129 aaPredicted RBP4.67□□□□□ -1.66
GSDMD-216ENST00000534602 KRTAP5-11Q6L8G4 156 aa4.66□□□□□ -1.66
GSDMD-216ENST00000534602 LCE1FQ5T754 118 aa4.59□□□□□ -1.67
GSDMD-216ENST00000534602 PRO0628Q9UI54 55 aa4.55□□□□□ -1.68
GSDMD-216ENST00000534602 LCE3EQ5T5B0 92 aa4.51□□□□□ -1.69
GSDMD-216ENST00000534602 SVIPQ8NHG7 77 aa4.42□□□□□ -1.7
GSDMD-216ENST00000534602 KTN1-AS1Q86SY8 53 aa4.41□□□□□ -1.7
GSDMD-216ENST00000534602 LUZP6Q538Z0 58 aa4.29□□□□□ -1.72
GSDMD-216ENST00000534602 KRTAP21-2Q3LI59 83 aa4.27□□□□□ -1.73
GSDMD-216ENST00000534602 PHGR1C9JFL3 82 aa4.12□□□□□ -1.75
GSDMD-216ENST00000534602 KRTAP4-4Q9BYR3 166 aa3.87□□□□□ -1.79
GSDMD-216ENST00000534602 MUC19Q7Z5P9 8384 aa3.73□□□□□ -1.81
GSDMD-216ENST00000534602 PRM1P04553 51 aa3.28□□□□□ -1.88
GSDMD-216ENST00000534602 KRTAP21-1Q3LI58 79 aa3.16□□□□□ -1.9
GSDMD-216ENST00000534602 NDUFAF8A1L188 74 aa3.13□□□□□ -1.91
GSDMD-216ENST00000534602 A0A0A0MQY5 61 aa2.97□□□□□ -1.93
GSDMD-216ENST00000534602 H3BS24 57 aa2.93□□□□□ -1.94
GSDMD-216ENST00000534602 INE1O15225 51 aa2.8□□□□□ -1.96
GSDMD-216ENST00000534602 MUC16Q8WXI7 14507 aa2.58□□□□□ -2
Retrieved 78 of 20,778 RNA–protein pairs in 25.9 ms