RNA–Protein interactions for RNA: ENST00000534401.5

PKP3-211, Transcript of plakophilin 3, humanhuman

TSL 3

Gene PKP3, Length 756 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PKP3-211ENST00000534401 MT1GP13640 62 aa7.7□□□□□ -1.18
PKP3-211ENST00000534401 PSPHP1O15172 72 aa7.65□□□□□ -1.18
PKP3-211ENST00000534401 MT1LQ93083 61 aa7.63□□□□□ -1.19
PKP3-211ENST00000534401 PP632Q6XCG6 107 aa7.56□□□□□ -1.2
PKP3-211ENST00000534401 MT1MQ8N339 61 aa7.55□□□□□ -1.2
PKP3-211ENST00000534401 DSTQ03001 7570 aaKnown RBP7.52□□□□□ -1.21
PKP3-211ENST00000534401 K7ERS5 55 aa7.5□□□□□ -1.21
PKP3-211ENST00000534401 KRTAP25-1Q3LHN0 102 aa7.5□□□□□ -1.21
PKP3-211ENST00000534401 KRTAP4-9Q9BYQ8 210 aa7.49□□□□□ -1.21
PKP3-211ENST00000534401 KRTAP12-3P60328 96 aa7.45□□□□□ -1.22
PKP3-211ENST00000534401 A6NED7 52 aa7.38□□□□□ -1.23
PKP3-211ENST00000534401 KRTAP4-3Q9BYR4 195 aa7.33□□□□□ -1.24
PKP3-211ENST00000534401 KRTAP23-1A1A580 65 aa7.31□□□□□ -1.24
PKP3-211ENST00000534401 SVIPQ8NHG7 77 aa7.26□□□□□ -1.25
PKP3-211ENST00000534401 LCE1DQ5T752 114 aa7.24□□□□□ -1.25
PKP3-211ENST00000534401 KRTAP4-7Q9BYR0 210 aa7.23□□□□□ -1.25
PKP3-211ENST00000534401 BRK1Q8WUW1 75 aa7.21□□□□□ -1.26
PKP3-211ENST00000534401 PRO0628Q9UI54 55 aa7.21□□□□□ -1.26
PKP3-211ENST00000534401 LCE4AQ5TA78 99 aa7.2□□□□□ -1.26
PKP3-211ENST00000534401 KRTAP19-4Q3LI73 84 aa7.17□□□□□ -1.26
PKP3-211ENST00000534401 KRTAP5-4Q6L8H1 288 aa7.17□□□□□ -1.26
PKP3-211ENST00000534401 CDC42SE1Q9NRR8 79 aa7.15□□□□□ -1.26
PKP3-211ENST00000534401 HMCN1Q96RW7 5635 aa7.12□□□□□ -1.27
PKP3-211ENST00000534401 MT4P47944 62 aa7.1□□□□□ -1.27
PKP3-211ENST00000534401 ROMO1P60602 79 aa7.08□□□□□ -1.28
PKP3-211ENST00000534401 AHNAK2Q8IVF2 5795 aa7.05□□□□□ -1.28
PKP3-211ENST00000534401 KRTAP15-1Q3LI76 137 aa7.04□□□□□ -1.28
PKP3-211ENST00000534401 KRTAP5-5Q701N2 237 aaPredicted RBP6.97□□□□□ -1.29
PKP3-211ENST00000534401 KRTAP5-10Q6L8G5 202 aa6.96□□□□□ -1.3
PKP3-211ENST00000534401 LCE3CQ5T5A8 94 aa6.9□□□□□ -1.3
PKP3-211ENST00000534401 KRTAP4-6Q9BYQ5 205 aa6.9□□□□□ -1.3
PKP3-211ENST00000534401 PMAIP1Q13794 54 aa6.85□□□□□ -1.31
PKP3-211ENST00000534401 LOC100996750A0A140TA64 210 aa6.83□□□□□ -1.32
PKP3-211ENST00000534401 KRTAP5-7Q6L8G8 165 aa6.73□□□□□ -1.33
PKP3-211ENST00000534401 SPRR5A0A1B0GTR4 108 aa6.72□□□□□ -1.33
PKP3-211ENST00000534401 KRTAP20-2Q3LI61 65 aa6.69□□□□□ -1.34
PKP3-211ENST00000534401 KRTAP5-3Q6L8H2 238 aa6.68□□□□□ -1.34
PKP3-211ENST00000534401 KRTAP12-4P60329 112 aa6.65□□□□□ -1.34
PKP3-211ENST00000534401 KTN1-AS1Q86SY8 53 aa6.63□□□□□ -1.35
PKP3-211ENST00000534401 SYNE1Q8NF91 8797 aaKnown RBP6.61□□□□□ -1.35
PKP3-211ENST00000534401 KRTAP9-6A8MVA2 160 aa6.55□□□□□ -1.36
PKP3-211ENST00000534401 MT1AP04731 61 aa6.5□□□□□ -1.37
PKP3-211ENST00000534401 KRTAP6-1Q3LI64 71 aa6.44□□□□□ -1.38
PKP3-211ENST00000534401 PRAC1Q96KF2 57 aa6.34□□□□□ -1.39
PKP3-211ENST00000534401 KRTAP5-2Q701N4 177 aa6.32□□□□□ -1.4
PKP3-211ENST00000534401 KRTAP9-4Q9BYQ2 154 aa6.27□□□□□ -1.41
PKP3-211ENST00000534401 KRTAP6-2Q3LI66 62 aa6.09□□□□□ -1.43
PKP3-211ENST00000534401 KRTAP4-11Q9BYQ6 195 aa6.07□□□□□ -1.44
PKP3-211ENST00000534401 MT3P25713 68 aa5.92□□□□□ -1.46
PKP3-211ENST00000534401 MUC5ACP98088 5654 aa5.9□□□□□ -1.46
PKP3-211ENST00000534401 KRTAP5-8O75690 187 aa5.89□□□□□ -1.47
PKP3-211ENST00000534401 AHNAKQ09666 5890 aaKnown RBP5.89□□□□□ -1.47
PKP3-211ENST00000534401 MUC5BQ9HC84 5762 aaPredicted RBP5.81□□□□□ -1.48
PKP3-211ENST00000534401 OBSCNQ5VST9 7968 aa5.7□□□□□ -1.5
PKP3-211ENST00000534401 KRTAP5-1Q6L8H4 278 aa5.62□□□□□ -1.51
PKP3-211ENST00000534401 KRTAP9-9Q9BYP9 154 aa5.62□□□□□ -1.51
PKP3-211ENST00000534401 LCE1EQ5T753 118 aa5.46□□□□□ -1.54
PKP3-211ENST00000534401 NDUFAF8A1L188 74 aa5.21□□□□□ -1.58
PKP3-211ENST00000534401 LUZP6Q538Z0 58 aa5.18□□□□□ -1.58
PKP3-211ENST00000534401 KRTAP4-2Q9BYR5 136 aa5.13□□□□□ -1.59
PKP3-211ENST00000534401 LCE1CQ5T751 118 aa5.06□□□□□ -1.6
PKP3-211ENST00000534401 LCE1BQ5T7P3 118 aa5.06□□□□□ -1.6
PKP3-211ENST00000534401 H3BS24 57 aa5.03□□□□□ -1.6
PKP3-211ENST00000534401 LCE3DQ9BYE3 92 aa4.99□□□□□ -1.61
PKP3-211ENST00000534401 LCE3EQ5T5B0 92 aa4.73□□□□□ -1.65
PKP3-211ENST00000534401 A0A0A0MQY5 61 aa4.71□□□□□ -1.66
PKP3-211ENST00000534401 KRTAP5-6Q6L8G9 129 aaPredicted RBP4.66□□□□□ -1.66
PKP3-211ENST00000534401 KRTAP5-11Q6L8G4 156 aa4.57□□□□□ -1.68
PKP3-211ENST00000534401 KRTAP4-12Q9BQ66 201 aa4.54□□□□□ -1.68
PKP3-211ENST00000534401 LCE1FQ5T754 118 aa4.41□□□□□ -1.7
PKP3-211ENST00000534401 INE1O15225 51 aa4.37□□□□□ -1.71
PKP3-211ENST00000534401 KRTAP21-2Q3LI59 83 aa4.28□□□□□ -1.72
PKP3-211ENST00000534401 PHGR1C9JFL3 82 aa4.06□□□□□ -1.76
PKP3-211ENST00000534401 KRTAP4-4Q9BYR3 166 aa3.79□□□□□ -1.8
PKP3-211ENST00000534401 PRM1P04553 51 aa3.61□□□□□ -1.83
PKP3-211ENST00000534401 MUC19Q7Z5P9 8384 aa3.52□□□□□ -1.85
PKP3-211ENST00000534401 KRTAP21-1Q3LI58 79 aa3.06□□□□□ -1.92
PKP3-211ENST00000534401 MUC16Q8WXI7 14507 aa2.58□□□□□ -2
Retrieved 78 of 20,778 RNA–protein pairs in 85.2 ms