RNA–Protein interactions for RNA: ENST00000533908.5

UBXN1-216, Transcript of UBX domain protein 1, humanhuman

TSL 1 (best)

Gene UBXN1, Length 739 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBXN1-216ENST00000533908 A8MU10 97 aa6.06□□□□□ -1.44
UBXN1-216ENST00000533908 TNP1P09430 55 aa6.04□□□□□ -1.44
UBXN1-216ENST00000533908 KRTAP20-2Q3LI61 65 aa6.02□□□□□ -1.45
UBXN1-216ENST00000533908 SMIM26A0A096LP01 95 aa5.99□□□□□ -1.45
UBXN1-216ENST00000533908 KRTAP5-5Q701N2 237 aaPredicted RBP5.97□□□□□ -1.45
UBXN1-216ENST00000533908 KRTAP12-3P60328 96 aa5.93□□□□□ -1.46
UBXN1-216ENST00000533908 SPRR5A0A1B0GTR4 108 aa5.92□□□□□ -1.46
UBXN1-216ENST00000533908 A0A1B0GU69 56 aa5.9□□□□□ -1.46
UBXN1-216ENST00000533908 H7BZZ5 65 aa5.88□□□□□ -1.47
UBXN1-216ENST00000533908 COX7CP15954 63 aa5.84□□□□□ -1.47
UBXN1-216ENST00000533908 LOC100996750A0A140TA64 210 aa5.82□□□□□ -1.48
UBXN1-216ENST00000533908 KRTAP12-4P60329 112 aa5.82□□□□□ -1.48
UBXN1-216ENST00000533908 SYNE1Q8NF91 8797 aaKnown RBP5.8□□□□□ -1.48
UBXN1-216ENST00000533908 KRTAP4-11Q9BYQ6 195 aa5.58□□□□□ -1.52
UBXN1-216ENST00000533908 PRR15LQ9BU68 103 aa5.55□□□□□ -1.52
UBXN1-216ENST00000533908 KRTAP25-1Q3LHN0 102 aa5.51□□□□□ -1.53
UBXN1-216ENST00000533908 KRTAP5-2Q701N4 177 aa5.51□□□□□ -1.53
UBXN1-216ENST00000533908 LINC01558Q9Y6Z2 57 aa5.51□□□□□ -1.53
UBXN1-216ENST00000533908 KRTAP19-4Q3LI73 84 aa5.5□□□□□ -1.53
UBXN1-216ENST00000533908 KRTAP6-1Q3LI64 71 aa5.45□□□□□ -1.54
UBXN1-216ENST00000533908 LCE3CQ5T5A8 94 aa5.44□□□□□ -1.54
UBXN1-216ENST00000533908 KRTAP5-8O75690 187 aa5.43□□□□□ -1.54
UBXN1-216ENST00000533908 MT1AP04731 61 aa5.42□□□□□ -1.54
UBXN1-216ENST00000533908 KRTAP15-1Q3LI76 137 aa5.42□□□□□ -1.54
UBXN1-216ENST00000533908 UQCR11O14957 56 aa5.41□□□□□ -1.54
UBXN1-216ENST00000533908 ANAPC13Q9BS18 74 aa5.39□□□□□ -1.55
UBXN1-216ENST00000533908 CCDC179H3BU77 68 aa5.38□□□□□ -1.55
UBXN1-216ENST00000533908 MUC5ACP98088 5654 aa5.31□□□□□ -1.56
UBXN1-216ENST00000533908 ATP5EP56381 51 aaPredicted RBP5.31□□□□□ -1.56
UBXN1-216ENST00000533908 OBSCNQ5VST9 7968 aa5.29□□□□□ -1.56
UBXN1-216ENST00000533908 KRTAP9-4Q9BYQ2 154 aa5.29□□□□□ -1.56
UBXN1-216ENST00000533908 AHNAKQ09666 5890 aaKnown RBP5.28□□□□□ -1.56
UBXN1-216ENST00000533908 KRTAP23-1A1A580 65 aa5.28□□□□□ -1.56
UBXN1-216ENST00000533908 MIR22HGQ0VDD5 57 aa5.27□□□□□ -1.57
UBXN1-216ENST00000533908 KRTAP6-2Q3LI66 62 aa5.26□□□□□ -1.57
UBXN1-216ENST00000533908 MUC5BQ9HC84 5762 aaPredicted RBP5.23□□□□□ -1.57
UBXN1-216ENST00000533908 KRTAP9-6A8MVA2 160 aa5.22□□□□□ -1.57
UBXN1-216ENST00000533908 K7ERS5 55 aa5.16□□□□□ -1.58
UBXN1-216ENST00000533908 KRTAP9-9Q9BYP9 154 aa5.14□□□□□ -1.59
UBXN1-216ENST00000533908 TMEM258P61165 79 aa5.05□□□□□ -1.6
UBXN1-216ENST00000533908 KRTAP5-1Q6L8H4 278 aa5.02□□□□□ -1.61
UBXN1-216ENST00000533908 PSPHP1O15172 72 aa4.99□□□□□ -1.61
UBXN1-216ENST00000533908 SVIPQ8NHG7 77 aa4.99□□□□□ -1.61
UBXN1-216ENST00000533908 PCP4P48539 62 aa4.96□□□□□ -1.62
UBXN1-216ENST00000533908 MT3P25713 68 aa4.95□□□□□ -1.62
UBXN1-216ENST00000533908 Q1T7F1 81 aa4.93□□□□□ -1.62
UBXN1-216ENST00000533908 RPS28P62857 69 aaKnown RBP4.89□□□□□ -1.63
UBXN1-216ENST00000533908 CDC42SE1Q9NRR8 79 aa4.88□□□□□ -1.63
UBXN1-216ENST00000533908 V9GYY9 64 aa4.83□□□□□ -1.64
UBXN1-216ENST00000533908 ROMO1P60602 79 aa4.81□□□□□ -1.64
UBXN1-216ENST00000533908 A6NED7 52 aa4.74□□□□□ -1.65
UBXN1-216ENST00000533908 LCE1EQ5T753 118 aa4.63□□□□□ -1.67
UBXN1-216ENST00000533908 KRTAP4-2Q9BYR5 136 aa4.47□□□□□ -1.69
UBXN1-216ENST00000533908 LCE1BQ5T7P3 118 aa4.41□□□□□ -1.7
UBXN1-216ENST00000533908 LCE1CQ5T751 118 aa4.31□□□□□ -1.72
UBXN1-216ENST00000533908 KRTAP4-12Q9BQ66 201 aa4.2□□□□□ -1.74
UBXN1-216ENST00000533908 PRO0628Q9UI54 55 aa4.14□□□□□ -1.75
UBXN1-216ENST00000533908 KRTAP5-11Q6L8G4 156 aa3.94□□□□□ -1.78
UBXN1-216ENST00000533908 LCE1FQ5T754 118 aa3.89□□□□□ -1.79
UBXN1-216ENST00000533908 PMAIP1Q13794 54 aa3.88□□□□□ -1.79
UBXN1-216ENST00000533908 KRTAP5-6Q6L8G9 129 aaPredicted RBP3.88□□□□□ -1.79
UBXN1-216ENST00000533908 BRK1Q8WUW1 75 aa3.87□□□□□ -1.79
UBXN1-216ENST00000533908 LCE3DQ9BYE3 92 aa3.83□□□□□ -1.8
UBXN1-216ENST00000533908 KTN1-AS1Q86SY8 53 aa3.76□□□□□ -1.81
UBXN1-216ENST00000533908 PHGR1C9JFL3 82 aa3.69□□□□□ -1.82
UBXN1-216ENST00000533908 KRTAP21-2Q3LI59 83 aa3.6□□□□□ -1.83
UBXN1-216ENST00000533908 LCE3EQ5T5B0 92 aa3.54□□□□□ -1.84
UBXN1-216ENST00000533908 PRAC1Q96KF2 57 aa3.43□□□□□ -1.86
UBXN1-216ENST00000533908 H3BS24 57 aa3.41□□□□□ -1.86
UBXN1-216ENST00000533908 KRTAP4-4Q9BYR3 166 aa3.38□□□□□ -1.87
UBXN1-216ENST00000533908 MUC19Q7Z5P9 8384 aa3.29□□□□□ -1.88
UBXN1-216ENST00000533908 A0A0A0MQY5 61 aa2.97□□□□□ -1.93
UBXN1-216ENST00000533908 NDUFAF8A1L188 74 aa2.93□□□□□ -1.94
UBXN1-216ENST00000533908 LUZP6Q538Z0 58 aa2.89□□□□□ -1.95
UBXN1-216ENST00000533908 KRTAP21-1Q3LI58 79 aa2.78□□□□□ -1.96
UBXN1-216ENST00000533908 INE1O15225 51 aa2.63□□□□□ -1.99
UBXN1-216ENST00000533908 PRM1P04553 51 aa2.47□□□□□ -2.01
UBXN1-216ENST00000533908 MUC16Q8WXI7 14507 aa2.26□□□□□ -2.05
Retrieved 78 of 20,778 RNA–protein pairs in 93.5 ms