RNA–Protein interactions for RNA: ENST00000533897.1

CTSC-208, Transcript of cathepsin C, humanhuman

TSL 2

Gene CTSC, Length 4,344 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTSC-208ENST00000533897 KMT2DO14686 5537 aa1.63□□□□□ -2.15
CTSC-208ENST00000533897 LCE1DQ5T752 114 aa1.62□□□□□ -2.15
CTSC-208ENST00000533897 SSPOA2VEC9 5147 aa1.62□□□□□ -2.15
CTSC-208ENST00000533897 KRTAP19-5Q3LI72 72 aa1.62□□□□□ -2.15
CTSC-208ENST00000533897 LCE3CQ5T5A8 94 aa1.62□□□□□ -2.15
CTSC-208ENST00000533897 LCE4AQ5TA78 99 aa1.62□□□□□ -2.15
CTSC-208ENST00000533897 USH2AO75445 5202 aa1.62□□□□□ -2.15
CTSC-208ENST00000533897 KRTAP19-7Q3SYF9 63 aa1.62□□□□□ -2.15
CTSC-208ENST00000533897 LCE3BQ5TA77 95 aa1.61□□□□□ -2.15
CTSC-208ENST00000533897 KRTAP2-3P0C7H8 128 aa1.6□□□□□ -2.15
CTSC-208ENST00000533897 KRTAP2-4Q9BYR9 128 aa1.6□□□□□ -2.15
CTSC-208ENST00000533897 KRTAP2-1Q9BYU5 128 aa1.6□□□□□ -2.15
CTSC-208ENST00000533897 KRTAP4-11Q9BYQ6 195 aa1.58□□□□□ -2.16
CTSC-208ENST00000533897 KRTAP19-4Q3LI73 84 aa1.55□□□□□ -2.16
CTSC-208ENST00000533897 MT1LQ93083 61 aa1.54□□□□□ -2.16
CTSC-208ENST00000533897 MT1EP04732 61 aa1.54□□□□□ -2.16
CTSC-208ENST00000533897 KRTAP9-7A8MTY7 169 aa1.53□□□□□ -2.16
CTSC-208ENST00000533897 KRTAP19-6Q3LI70 58 aa1.49□□□□□ -2.17
CTSC-208ENST00000533897 KRTAP5-6Q6L8G9 129 aaPredicted RBP1.47□□□□□ -2.17
CTSC-208ENST00000533897 FCGBPQ9Y6R7 5405 aaPredicted RBP1.44□□□□□ -2.18
CTSC-208ENST00000533897 KRTAP4-3Q9BYR4 195 aa1.43□□□□□ -2.18
CTSC-208ENST00000533897 MT1MQ8N339 61 aa1.42□□□□□ -2.18
CTSC-208ENST00000533897 LCE5AQ5TCM9 118 aa1.41□□□□□ -2.18
CTSC-208ENST00000533897 KRTAP19-3Q7Z4W3 81 aa1.4□□□□□ -2.19
CTSC-208ENST00000533897 HMCN1Q96RW7 5635 aa1.4□□□□□ -2.19
CTSC-208ENST00000533897 MUC12Q9UKN1 5478 aa1.38□□□□□ -2.19
CTSC-208ENST00000533897 MT1GP13640 62 aa1.38□□□□□ -2.19
CTSC-208ENST00000533897 MT3P25713 68 aa1.38□□□□□ -2.19
CTSC-208ENST00000533897 FSIP2Q5CZC0 6907 aa1.36□□□□□ -2.19
CTSC-208ENST00000533897 KRTAP5-5Q701N2 237 aaPredicted RBP1.36□□□□□ -2.19
CTSC-208ENST00000533897 CRCT1Q9UGL9 99 aa1.35□□□□□ -2.19
CTSC-208ENST00000533897 MT1AP04731 61 aa1.34□□□□□ -2.2
CTSC-208ENST00000533897 SYNE1Q8NF91 8797 aaKnown RBP1.33□□□□□ -2.2
CTSC-208ENST00000533897 KRTAP6-1Q3LI64 71 aa1.3□□□□□ -2.2
CTSC-208ENST00000533897 KRTAP5-9P26371 169 aa1.3□□□□□ -2.2
CTSC-208ENST00000533897 MACF1Q9UPN3 7388 aaKnown RBP1.3□□□□□ -2.2
CTSC-208ENST00000533897 KRTAP12-4P60329 112 aa1.29□□□□□ -2.2
CTSC-208ENST00000533897 MUC19Q7Z5P9 8384 aa1.28□□□□□ -2.2
CTSC-208ENST00000533897 LCE1AQ5T7P2 110 aa1.26□□□□□ -2.21
CTSC-208ENST00000533897 MDN1Q9NU22 5596 aa1.25□□□□□ -2.21
CTSC-208ENST00000533897 SPRR2FQ96RM1 72 aa1.24□□□□□ -2.21
CTSC-208ENST00000533897 DSTQ03001 7570 aaKnown RBP1.23□□□□□ -2.21
CTSC-208ENST00000533897 SYNE2Q8WXH0 6885 aaKnown RBP1.22□□□□□ -2.21
CTSC-208ENST00000533897 KRTAP5-4Q6L8H1 288 aa1.21□□□□□ -2.22
CTSC-208ENST00000533897 LCE3EQ5T5B0 92 aa1.2□□□□□ -2.22
CTSC-208ENST00000533897 LCE1EQ5T753 118 aa1.2□□□□□ -2.22
CTSC-208ENST00000533897 LCE1FQ5T754 118 aa1.2□□□□□ -2.22
CTSC-208ENST00000533897 LCE3DQ9BYE3 92 aa1.2□□□□□ -2.22
CTSC-208ENST00000533897 MUC5BQ9HC84 5762 aaPredicted RBP1.18□□□□□ -2.22
CTSC-208ENST00000533897 KRTAP5-2Q701N4 177 aa1.18□□□□□ -2.22
CTSC-208ENST00000533897 PRM1P04553 51 aa1.16□□□□□ -2.22
CTSC-208ENST00000533897 KRTAP20-1Q3LI63 56 aa1.16□□□□□ -2.22
CTSC-208ENST00000533897 KRTAP6-2Q3LI66 62 aa1.15□□□□□ -2.23
CTSC-208ENST00000533897 KRTAP6-3Q3LI67 103 aa1.15□□□□□ -2.23
CTSC-208ENST00000533897 SPRR2EP22531 72 aa1.12□□□□□ -2.23
CTSC-208ENST00000533897 SPRR2BP35325 72 aa1.12□□□□□ -2.23
CTSC-208ENST00000533897 SPRR2AP35326 72 aa1.12□□□□□ -2.23
CTSC-208ENST00000533897 KRTAP2-2Q9BYT5 123 aa1.11□□□□□ -2.23
CTSC-208ENST00000533897 KRTAP5-11Q6L8G4 156 aa1.1□□□□□ -2.23
CTSC-208ENST00000533897 KRTAP4-4Q9BYR3 166 aa1.09□□□□□ -2.23
CTSC-208ENST00000533897 SPRR2DP22532 72 aa1.08□□□□□ -2.24
CTSC-208ENST00000533897 NEBP20929 6669 aa1.07□□□□□ -2.24
CTSC-208ENST00000533897 GPR98Q8WXG9 6306 aa1.03□□□□□ -2.24
CTSC-208ENST00000533897 KRTAP20-2Q3LI61 65 aa1.02□□□□□ -2.25
CTSC-208ENST00000533897 KRTAP5-1Q6L8H4 278 aa1.02□□□□□ -2.25
CTSC-208ENST00000533897 MUC5ACP98088 5654 aa0.99□□□□□ -2.25
CTSC-208ENST00000533897 KRTAP5-8O75690 187 aa0.97□□□□□ -2.25
CTSC-208ENST00000533897 KRTAP5-10Q6L8G5 202 aa0.97□□□□□ -2.25
CTSC-208ENST00000533897 KRTAP5-7Q6L8G8 165 aa0.96□□□□□ -2.26
CTSC-208ENST00000533897 AHNAK2Q8IVF2 5795 aa0.94□□□□□ -2.26
CTSC-208ENST00000533897 MT4P47944 62 aa0.93□□□□□ -2.26
CTSC-208ENST00000533897 LCE1CQ5T751 118 aa0.92□□□□□ -2.26
CTSC-208ENST00000533897 LCE1BQ5T7P3 118 aa0.92□□□□□ -2.26
CTSC-208ENST00000533897 KRTAP21-2Q3LI59 83 aa0.89□□□□□ -2.27
CTSC-208ENST00000533897 AHNAKQ09666 5890 aaKnown RBP0.85□□□□□ -2.27
CTSC-208ENST00000533897 KRTAP21-1Q3LI58 79 aa0.83□□□□□ -2.28
CTSC-208ENST00000533897 PHGR1C9JFL3 82 aa0.68□□□□□ -2.3
CTSC-208ENST00000533897 MUC16Q8WXI7 14507 aa0.49□□□□□ -2.33
Retrieved 78 of 20,778 RNA–protein pairs in 65 ms