RNA–Protein interactions for RNA: ENST00000533683.6

SAMD1-202, Transcript of sterile alpha motif domain containing 1, humanhuman

APPRIS P5 TSL 1 (best) BASIC

Gene SAMD1, Length 2,164 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SAMD1-202ENST00000533683 MUC12Q9UKN1 5478 aa9.72□□□□□ -0.85
SAMD1-202ENST00000533683 KRTAP19-3Q7Z4W3 81 aa9.63□□□□□ -0.87
SAMD1-202ENST00000533683 MACF1Q9UPN3 7388 aaKnown RBP9.62□□□□□ -0.87
SAMD1-202ENST00000533683 SPRR2FQ96RM1 72 aa9.57□□□□□ -0.88
SAMD1-202ENST00000533683 CRCT1Q9UGL9 99 aa9.57□□□□□ -0.88
SAMD1-202ENST00000533683 MT1GP13640 62 aa9.56□□□□□ -0.88
SAMD1-202ENST00000533683 MT1MQ8N339 61 aa9.52□□□□□ -0.89
SAMD1-202ENST00000533683 KRTAP4-3Q9BYR4 195 aa9.49□□□□□ -0.89
SAMD1-202ENST00000533683 LCE5AQ5TCM9 118 aa9.39□□□□□ -0.91
SAMD1-202ENST00000533683 SYNE2Q8WXH0 6885 aaKnown RBP9.31□□□□□ -0.92
SAMD1-202ENST00000533683 LOC100996750A0A140TA64 210 aa9.29□□□□□ -0.92
SAMD1-202ENST00000533683 KRTAP2-3P0C7H8 128 aa9.23□□□□□ -0.93
SAMD1-202ENST00000533683 KRTAP2-4Q9BYR9 128 aa9.23□□□□□ -0.93
SAMD1-202ENST00000533683 KRTAP2-1Q9BYU5 128 aa9.23□□□□□ -0.93
SAMD1-202ENST00000533683 KRTAP5-9P26371 169 aa9.21□□□□□ -0.94
SAMD1-202ENST00000533683 MDN1Q9NU22 5596 aa9.12□□□□□ -0.95
SAMD1-202ENST00000533683 DSTQ03001 7570 aaKnown RBP9.07□□□□□ -0.96
SAMD1-202ENST00000533683 LCE1AQ5T7P2 110 aa9.06□□□□□ -0.96
SAMD1-202ENST00000533683 SPRR2EP22531 72 aa8.9□□□□□ -0.98
SAMD1-202ENST00000533683 SPRR2BP35325 72 aa8.9□□□□□ -0.98
SAMD1-202ENST00000533683 SPRR2AP35326 72 aa8.9□□□□□ -0.98
SAMD1-202ENST00000533683 KRTAP9-1A8MXZ3 250 aaPredicted RBP8.83□□□□□ -1
SAMD1-202ENST00000533683 KRTAP9-6A0A140TA67 174 aa8.76□□□□□ -1.01
SAMD1-202ENST00000533683 KRTAP6-3Q3LI67 103 aa8.75□□□□□ -1.01
SAMD1-202ENST00000533683 SPRR2DP22532 72 aa8.54□□□□□ -1.04
SAMD1-202ENST00000533683 KRTAP5-5Q701N2 237 aaPredicted RBP8.52□□□□□ -1.05
SAMD1-202ENST00000533683 KRTAP6-1Q3LI64 71 aa8.49□□□□□ -1.05
SAMD1-202ENST00000533683 MT1AP04731 61 aa8.47□□□□□ -1.05
SAMD1-202ENST00000533683 LCE3BQ5TA77 95 aa8.4□□□□□ -1.06
SAMD1-202ENST00000533683 SYNE1Q8NF91 8797 aaKnown RBP8.18□□□□□ -1.1
SAMD1-202ENST00000533683 KRTAP9-7A8MTY7 169 aa8.14□□□□□ -1.11
SAMD1-202ENST00000533683 NEBP20929 6669 aa8.12□□□□□ -1.11
SAMD1-202ENST00000533683 KRTAP4-9Q9BYQ8 210 aa8.1□□□□□ -1.11
SAMD1-202ENST00000533683 KRTAP9-4Q9BYQ2 154 aa8.02□□□□□ -1.13
SAMD1-202ENST00000533683 KRTAP12-4P60329 112 aa7.98□□□□□ -1.13
SAMD1-202ENST00000533683 KRTAP5-4Q6L8H1 288 aa7.83□□□□□ -1.16
SAMD1-202ENST00000533683 LCE3DQ9BYE3 92 aa7.78□□□□□ -1.16
SAMD1-202ENST00000533683 KRTAP6-2Q3LI66 62 aa7.72□□□□□ -1.17
SAMD1-202ENST00000533683 MT3P25713 68 aa7.64□□□□□ -1.19
SAMD1-202ENST00000533683 LCE3EQ5T5B0 92 aa7.61□□□□□ -1.19
SAMD1-202ENST00000533683 KRTAP4-6Q9BYQ5 205 aa7.5□□□□□ -1.21
SAMD1-202ENST00000533683 LCE4AQ5TA78 99 aa7.5□□□□□ -1.21
SAMD1-202ENST00000533683 MT4P47944 62 aa7.48□□□□□ -1.21
SAMD1-202ENST00000533683 KRTAP2-2Q9BYT5 123 aa7.42□□□□□ -1.22
SAMD1-202ENST00000533683 KRTAP20-2Q3LI61 65 aa7.33□□□□□ -1.24
SAMD1-202ENST00000533683 OBSCNQ5VST9 7968 aa7.26□□□□□ -1.25
SAMD1-202ENST00000533683 HMCN1Q96RW7 5635 aa7.23□□□□□ -1.25
SAMD1-202ENST00000533683 KRTAP20-1Q3LI63 56 aa7.22□□□□□ -1.25
SAMD1-202ENST00000533683 LCE1DQ5T752 114 aa7.22□□□□□ -1.25
SAMD1-202ENST00000533683 KRTAP5-2Q701N4 177 aa7.2□□□□□ -1.26
SAMD1-202ENST00000533683 KRTAP5-3Q6L8H2 238 aa7.03□□□□□ -1.28
SAMD1-202ENST00000533683 PRM1P04553 51 aa7.01□□□□□ -1.29
SAMD1-202ENST00000533683 KRTAP9-9Q9BYP9 154 aa6.9□□□□□ -1.3
SAMD1-202ENST00000533683 LCE1FQ5T754 118 aa6.64□□□□□ -1.35
SAMD1-202ENST00000533683 LCE1EQ5T753 118 aa6.46□□□□□ -1.38
SAMD1-202ENST00000533683 MUC5ACP98088 5654 aa6.33□□□□□ -1.4
SAMD1-202ENST00000533683 KRTAP4-11Q9BYQ6 195 aa6.22□□□□□ -1.41
SAMD1-202ENST00000533683 LCE1BQ5T7P3 118 aa6.2□□□□□ -1.42
SAMD1-202ENST00000533683 KRTAP5-1Q6L8H4 278 aa6.18□□□□□ -1.42
SAMD1-202ENST00000533683 KRTAP5-10Q6L8G5 202 aa6.13□□□□□ -1.43
SAMD1-202ENST00000533683 KRTAP4-2Q9BYR5 136 aa6.09□□□□□ -1.43
SAMD1-202ENST00000533683 AHNAK2Q8IVF2 5795 aa6.07□□□□□ -1.44
SAMD1-202ENST00000533683 LCE1CQ5T751 118 aa6.06□□□□□ -1.44
SAMD1-202ENST00000533683 KRTAP5-8O75690 187 aa5.97□□□□□ -1.45
SAMD1-202ENST00000533683 KRTAP5-7Q6L8G8 165 aa5.83□□□□□ -1.48
SAMD1-202ENST00000533683 KRTAP5-6Q6L8G9 129 aaPredicted RBP5.7□□□□□ -1.5
SAMD1-202ENST00000533683 KRTAP21-2Q3LI59 83 aa5.53□□□□□ -1.52
SAMD1-202ENST00000533683 KRTAP4-12Q9BQ66 201 aa5.45□□□□□ -1.54
SAMD1-202ENST00000533683 KRTAP5-11Q6L8G4 156 aa5.28□□□□□ -1.56
SAMD1-202ENST00000533683 GPR98Q8WXG9 6306 aa5.24□□□□□ -1.57
SAMD1-202ENST00000533683 MUC5BQ9HC84 5762 aaPredicted RBP5.23□□□□□ -1.57
SAMD1-202ENST00000533683 KRTAP4-4Q9BYR3 166 aa4.98□□□□□ -1.61
SAMD1-202ENST00000533683 PHGR1C9JFL3 82 aa4.55□□□□□ -1.68
SAMD1-202ENST00000533683 KRTAP21-1Q3LI58 79 aa4.49□□□□□ -1.69
SAMD1-202ENST00000533683 MUC19Q7Z5P9 8384 aa4.36□□□□□ -1.71
SAMD1-202ENST00000533683 AHNAKQ09666 5890 aaKnown RBP4.3□□□□□ -1.72
SAMD1-202ENST00000533683 MUC16Q8WXI7 14507 aa2.99□□□□□ -1.93
Retrieved 77 of 20,778 RNA–protein pairs in 11.2 ms