RNA–Protein interactions for RNA: ENST00000533476.5

UBXN1-215, Transcript of UBX domain protein 1, humanhuman

TSL 2

Gene UBXN1, Length 1,912 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBXN1-215ENST00000533476 SYNE2Q8WXH0 6885 aaKnown RBP6.83□□□□□ -1.32
UBXN1-215ENST00000533476 KRTAP19-4Q3LI73 84 aa6.83□□□□□ -1.32
UBXN1-215ENST00000533476 MT1EP04732 61 aa6.82□□□□□ -1.32
UBXN1-215ENST00000533476 MT1LQ93083 61 aa6.77□□□□□ -1.33
UBXN1-215ENST00000533476 KRTAP9-6A8MVA2 160 aa6.7□□□□□ -1.34
UBXN1-215ENST00000533476 KRTAP4-7Q9BYR0 210 aa6.67□□□□□ -1.34
UBXN1-215ENST00000533476 KRTAP9-7A8MTY7 169 aa6.65□□□□□ -1.34
UBXN1-215ENST00000533476 MUC12Q9UKN1 5478 aa6.51□□□□□ -1.37
UBXN1-215ENST00000533476 KRTAP2-3P0C7H8 128 aa6.5□□□□□ -1.37
UBXN1-215ENST00000533476 KRTAP2-4Q9BYR9 128 aa6.5□□□□□ -1.37
UBXN1-215ENST00000533476 KRTAP2-1Q9BYU5 128 aa6.5□□□□□ -1.37
UBXN1-215ENST00000533476 KRTAP6-3Q3LI67 103 aa6.46□□□□□ -1.37
UBXN1-215ENST00000533476 KRTAP19-3Q7Z4W3 81 aa6.42□□□□□ -1.38
UBXN1-215ENST00000533476 SPRR2FQ96RM1 72 aa6.4□□□□□ -1.38
UBXN1-215ENST00000533476 MT1GP13640 62 aa6.39□□□□□ -1.39
UBXN1-215ENST00000533476 MT1MQ8N339 61 aa6.38□□□□□ -1.39
UBXN1-215ENST00000533476 KRTAP5-9P26371 169 aa6.37□□□□□ -1.39
UBXN1-215ENST00000533476 MDN1Q9NU22 5596 aa6.37□□□□□ -1.39
UBXN1-215ENST00000533476 KRTAP4-3Q9BYR4 195 aa6.33□□□□□ -1.4
UBXN1-215ENST00000533476 LCE5AQ5TCM9 118 aa6.25□□□□□ -1.41
UBXN1-215ENST00000533476 LOC100996750A0A140TA64 210 aa6.24□□□□□ -1.41
UBXN1-215ENST00000533476 SPRR2EP22531 72 aa6.18□□□□□ -1.42
UBXN1-215ENST00000533476 SPRR2BP35325 72 aa6.18□□□□□ -1.42
UBXN1-215ENST00000533476 SPRR2AP35326 72 aa6.18□□□□□ -1.42
UBXN1-215ENST00000533476 NEBP20929 6669 aa6.13□□□□□ -1.43
UBXN1-215ENST00000533476 LCE1AQ5T7P2 110 aa6.13□□□□□ -1.43
UBXN1-215ENST00000533476 SPRR2DP22532 72 aa5.95□□□□□ -1.46
UBXN1-215ENST00000533476 DSTQ03001 7570 aaKnown RBP5.94□□□□□ -1.46
UBXN1-215ENST00000533476 KRTAP20-1Q3LI63 56 aa5.83□□□□□ -1.48
UBXN1-215ENST00000533476 LCE3BQ5TA77 95 aa5.75□□□□□ -1.49
UBXN1-215ENST00000533476 MT1AP04731 61 aa5.72□□□□□ -1.49
UBXN1-215ENST00000533476 KRTAP6-1Q3LI64 71 aa5.71□□□□□ -1.5
UBXN1-215ENST00000533476 KRTAP5-5Q701N2 237 aaPredicted RBP5.7□□□□□ -1.5
UBXN1-215ENST00000533476 KRTAP12-4P60329 112 aa5.64□□□□□ -1.51
UBXN1-215ENST00000533476 KRTAP2-2Q9BYT5 123 aa5.61□□□□□ -1.51
UBXN1-215ENST00000533476 KRTAP4-9Q9BYQ8 210 aa5.49□□□□□ -1.53
UBXN1-215ENST00000533476 KRTAP9-4Q9BYQ2 154 aa5.39□□□□□ -1.55
UBXN1-215ENST00000533476 LCE3DQ9BYE3 92 aa5.35□□□□□ -1.55
UBXN1-215ENST00000533476 SYNE1Q8NF91 8797 aaKnown RBP5.32□□□□□ -1.56
UBXN1-215ENST00000533476 LCE3EQ5T5B0 92 aa5.29□□□□□ -1.56
UBXN1-215ENST00000533476 MT4P47944 62 aa5.26□□□□□ -1.57
UBXN1-215ENST00000533476 LCE1DQ5T752 114 aa5.2□□□□□ -1.58
UBXN1-215ENST00000533476 KRTAP5-4Q6L8H1 288 aa5.19□□□□□ -1.58
UBXN1-215ENST00000533476 LCE4AQ5TA78 99 aa5.17□□□□□ -1.58
UBXN1-215ENST00000533476 KRTAP6-2Q3LI66 62 aa5.16□□□□□ -1.58
UBXN1-215ENST00000533476 MT3P25713 68 aa5.15□□□□□ -1.59
UBXN1-215ENST00000533476 KRTAP4-6Q9BYQ5 205 aa5.15□□□□□ -1.59
UBXN1-215ENST00000533476 HMCN1Q96RW7 5635 aa5.12□□□□□ -1.59
UBXN1-215ENST00000533476 PRM1P04553 51 aa4.97□□□□□ -1.61
UBXN1-215ENST00000533476 KRTAP20-2Q3LI61 65 aa4.93□□□□□ -1.62
UBXN1-215ENST00000533476 GPR98Q8WXG9 6306 aa4.81□□□□□ -1.64
UBXN1-215ENST00000533476 KRTAP5-2Q701N4 177 aa4.78□□□□□ -1.64
UBXN1-215ENST00000533476 KRTAP5-3Q6L8H2 238 aa4.75□□□□□ -1.65
UBXN1-215ENST00000533476 OBSCNQ5VST9 7968 aa4.69□□□□□ -1.66
UBXN1-215ENST00000533476 AHNAK2Q8IVF2 5795 aa4.69□□□□□ -1.66
UBXN1-215ENST00000533476 KRTAP5-10Q6L8G5 202 aa4.54□□□□□ -1.68
UBXN1-215ENST00000533476 KRTAP4-11Q9BYQ6 195 aa4.4□□□□□ -1.71
UBXN1-215ENST00000533476 LCE1EQ5T753 118 aa4.31□□□□□ -1.72
UBXN1-215ENST00000533476 KRTAP5-8O75690 187 aa4.24□□□□□ -1.73
UBXN1-215ENST00000533476 KRTAP5-7Q6L8G8 165 aa4.24□□□□□ -1.73
UBXN1-215ENST00000533476 MUC5ACP98088 5654 aa4.19□□□□□ -1.74
UBXN1-215ENST00000533476 KRTAP5-1Q6L8H4 278 aa4.12□□□□□ -1.75
UBXN1-215ENST00000533476 LCE1BQ5T7P3 118 aa4.11□□□□□ -1.75
UBXN1-215ENST00000533476 LCE1CQ5T751 118 aa4.05□□□□□ -1.76
UBXN1-215ENST00000533476 KRTAP4-2Q9BYR5 136 aa4.05□□□□□ -1.76
UBXN1-215ENST00000533476 KRTAP9-9Q9BYP9 154 aa3.91□□□□□ -1.78
UBXN1-215ENST00000533476 MUC5BQ9HC84 5762 aaPredicted RBP3.84□□□□□ -1.79
UBXN1-215ENST00000533476 KRTAP5-6Q6L8G9 129 aaPredicted RBP3.83□□□□□ -1.8
UBXN1-215ENST00000533476 KRTAP21-2Q3LI59 83 aa3.72□□□□□ -1.81
UBXN1-215ENST00000533476 KRTAP4-12Q9BQ66 201 aa3.69□□□□□ -1.82
UBXN1-215ENST00000533476 AHNAKQ09666 5890 aaKnown RBP3.65□□□□□ -1.82
UBXN1-215ENST00000533476 KRTAP5-11Q6L8G4 156 aa3.52□□□□□ -1.85
UBXN1-215ENST00000533476 KRTAP4-4Q9BYR3 166 aa3.3□□□□□ -1.88
UBXN1-215ENST00000533476 KRTAP21-1Q3LI58 79 aa3.21□□□□□ -1.9
UBXN1-215ENST00000533476 LCE1FQ5T754 118 aa3.12□□□□□ -1.91
UBXN1-215ENST00000533476 PHGR1C9JFL3 82 aa3.02□□□□□ -1.93
UBXN1-215ENST00000533476 MUC19Q7Z5P9 8384 aa2.83□□□□□ -1.96
UBXN1-215ENST00000533476 MUC16Q8WXI7 14507 aa2□□□□□ -2.09
Retrieved 78 of 20,778 RNA–protein pairs in 65.6 ms