RNA–Protein interactions for RNA: ENST00000533154.1

C11orf54-212, Transcript of chromosome 11 open reading frame 54, humanhuman

TSL 1 (best)

Gene C11orf54, Length 903 nt, Biotype protein coding, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
C11orf54-212ENST00000533154 S4R3F8 94 aa2.59□□□□□ -1.99
C11orf54-212ENST00000533154 FAT4Q6V0I7 4981 aa2.58□□□□□ -2
C11orf54-212ENST00000533154 A0A0D9SG42 100 aa2.56□□□□□ -2
C11orf54-212ENST00000533154 KRTAP12-1P59990 96 aa2.53□□□□□ -2
C11orf54-212ENST00000533154 PLAC4Q8WY50 150 aa2.51□□□□□ -2.01
C11orf54-212ENST00000533154 MUC19Q7Z5P9 8384 aa2.5□□□□□ -2.01
C11orf54-212ENST00000533154 KRTAP4-1Q9BYQ7 146 aa2.49□□□□□ -2.01
C11orf54-212ENST00000533154 CRCT1Q9UGL9 99 aa2.49□□□□□ -2.01
C11orf54-212ENST00000533154 FSIP2Q5CZC0 6907 aa2.48□□□□□ -2.01
C11orf54-212ENST00000533154 C9orf92A6NGG3 77 aa2.47□□□□□ -2.01
C11orf54-212ENST00000533154 M0QZ58 72 aa2.47□□□□□ -2.01
C11orf54-212ENST00000533154 MUC17Q685J3 4493 aa2.46□□□□□ -2.01
C11orf54-212ENST00000533154 KRTAP10-10P60014 251 aa2.43□□□□□ -2.02
C11orf54-212ENST00000533154 KRTAP19-2Q3LHN2 52 aa2.43□□□□□ -2.02
C11orf54-212ENST00000533154 LCE3DQ9BYE3 92 aa2.43□□□□□ -2.02
C11orf54-212ENST00000533154 PP632Q6XCG6 107 aa2.42□□□□□ -2.02
C11orf54-212ENST00000533154 MT1HP80294 61 aa2.41□□□□□ -2.02
C11orf54-212ENST00000533154 PRO2289Q9P1D8 64 aa2.41□□□□□ -2.02
C11orf54-212ENST00000533154 KRTAP5-7Q6L8G8 165 aa2.34□□□□□ -2.03
C11orf54-212ENST00000533154 INE1O15225 51 aa2.32□□□□□ -2.04
C11orf54-212ENST00000533154 M0R2T5 61 aa2.31□□□□□ -2.04
C11orf54-212ENST00000533154 FLGP20930 4061 aaPredicted RBP2.3□□□□□ -2.04
C11orf54-212ENST00000533154 SSPOA2VEC9 5147 aa2.25□□□□□ -2.05
C11orf54-212ENST00000533154 USH2AO75445 5202 aa2.24□□□□□ -2.05
C11orf54-212ENST00000533154 FCGBPQ9Y6R7 5405 aaPredicted RBP2.23□□□□□ -2.05
C11orf54-212ENST00000533154 MT2AP02795 61 aa2.21□□□□□ -2.06
C11orf54-212ENST00000533154 MT1FP04733 61 aa2.2□□□□□ -2.06
C11orf54-212ENST00000533154 TNP1P09430 55 aa2.2□□□□□ -2.06
C11orf54-212ENST00000533154 KRTAP6-3Q3LI67 103 aa2.19□□□□□ -2.06
C11orf54-212ENST00000533154 MACF1Q9UPN3 7388 aaKnown RBP2.18□□□□□ -2.06
C11orf54-212ENST00000533154 SYNE2Q8WXH0 6885 aaKnown RBP2.17□□□□□ -2.06
C11orf54-212ENST00000533154 KRTAP19-6Q3LI70 58 aa2.14□□□□□ -2.07
C11orf54-212ENST00000533154 KRTAP21-2Q3LI59 83 aa2.11□□□□□ -2.07
C11orf54-212ENST00000533154 NEBP20929 6669 aa2.06□□□□□ -2.08
C11orf54-212ENST00000533154 KRTAP20-1Q3LI63 56 aa2.02□□□□□ -2.09
C11orf54-212ENST00000533154 KRTAP8-1Q8IUC2 63 aa2.02□□□□□ -2.09
C11orf54-212ENST00000533154 MT1BP07438 61 aa1.99□□□□□ -2.09
C11orf54-212ENST00000533154 KRTAP12-3P60328 96 aa1.99□□□□□ -2.09
C11orf54-212ENST00000533154 MUC12Q9UKN1 5478 aa1.97□□□□□ -2.09
C11orf54-212ENST00000533154 HMCN1Q96RW7 5635 aa1.97□□□□□ -2.09
C11orf54-212ENST00000533154 KRTAP19-8Q3LI54 63 aa1.95□□□□□ -2.1
C11orf54-212ENST00000533154 KRTAP2-3P0C7H8 128 aa1.94□□□□□ -2.1
C11orf54-212ENST00000533154 SPRR2GQ9BYE4 73 aa1.94□□□□□ -2.1
C11orf54-212ENST00000533154 KRTAP2-4Q9BYR9 128 aa1.94□□□□□ -2.1
C11orf54-212ENST00000533154 KMT2DO14686 5537 aa1.94□□□□□ -2.1
C11orf54-212ENST00000533154 MDN1Q9NU22 5596 aa1.91□□□□□ -2.1
C11orf54-212ENST00000533154 SPRR2EP22531 72 aa1.88□□□□□ -2.11
C11orf54-212ENST00000533154 SPRR2BP35325 72 aa1.88□□□□□ -2.11
C11orf54-212ENST00000533154 SPRR2AP35326 72 aa1.88□□□□□ -2.11
C11orf54-212ENST00000533154 KRTAP12-4P60329 112 aa1.88□□□□□ -2.11
C11orf54-212ENST00000533154 SPRR2FQ96RM1 72 aa1.88□□□□□ -2.11
C11orf54-212ENST00000533154 KRTAP2-1Q9BYU5 128 aa1.87□□□□□ -2.11
C11orf54-212ENST00000533154 MT1XP80297 61 aa1.83□□□□□ -2.12
C11orf54-212ENST00000533154 SPRR2DP22532 72 aa1.82□□□□□ -2.12
C11orf54-212ENST00000533154 KRTAP19-5Q3LI72 72 aa1.74□□□□□ -2.13
C11orf54-212ENST00000533154 GPR98Q8WXG9 6306 aa1.74□□□□□ -2.13
C11orf54-212ENST00000533154 DSTQ03001 7570 aaKnown RBP1.71□□□□□ -2.14
C11orf54-212ENST00000533154 KRTAP19-7Q3SYF9 63 aa1.64□□□□□ -2.15
C11orf54-212ENST00000533154 MT1EP04732 61 aa1.62□□□□□ -2.15
C11orf54-212ENST00000533154 KRTAP19-3Q7Z4W3 81 aa1.62□□□□□ -2.15
C11orf54-212ENST00000533154 MT4P47944 62 aa1.61□□□□□ -2.15
C11orf54-212ENST00000533154 KRTAP5-10Q6L8G5 202 aa1.61□□□□□ -2.15
C11orf54-212ENST00000533154 MT1LQ93083 61 aa1.58□□□□□ -2.16
C11orf54-212ENST00000533154 MT1GP13640 62 aa1.57□□□□□ -2.16
C11orf54-212ENST00000533154 AHNAK2Q8IVF2 5795 aa1.56□□□□□ -2.16
C11orf54-212ENST00000533154 MT1MQ8N339 61 aa1.55□□□□□ -2.16
C11orf54-212ENST00000533154 MT1AP04731 61 aa1.52□□□□□ -2.17
C11orf54-212ENST00000533154 PRM1P04553 51 aa1.5□□□□□ -2.17
C11orf54-212ENST00000533154 SYNE1Q8NF91 8797 aaKnown RBP1.5□□□□□ -2.17
C11orf54-212ENST00000533154 KRTAP20-2Q3LI61 65 aa1.48□□□□□ -2.17
C11orf54-212ENST00000533154 KRTAP6-2Q3LI66 62 aa1.37□□□□□ -2.19
C11orf54-212ENST00000533154 KRTAP6-1Q3LI64 71 aa1.34□□□□□ -2.19
C11orf54-212ENST00000533154 MUC5ACP98088 5654 aa1.32□□□□□ -2.2
C11orf54-212ENST00000533154 MUC5BQ9HC84 5762 aaPredicted RBP1.3□□□□□ -2.2
C11orf54-212ENST00000533154 AHNAKQ09666 5890 aaKnown RBP1.29□□□□□ -2.2
C11orf54-212ENST00000533154 KRTAP21-1Q3LI58 79 aa1.02□□□□□ -2.25
C11orf54-212ENST00000533154 PHGR1C9JFL3 82 aa0.93□□□□□ -2.26
C11orf54-212ENST00000533154 MUC16Q8WXI7 14507 aa0.91□□□□□ -2.26
Retrieved 78 of 20,778 RNA–protein pairs in 40.4 ms