RNA–Protein interactions for RNA: ENST00000533129.5

CAPN1-224, Transcript of calpain 1, humanhuman

APPRIS P1 TSL 5 BASIC

Gene CAPN1, Length 2,792 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CAPN1-224ENST00000533129 LCE5AQ5TCM9 118 aa5.08□□□□□ -1.6
CAPN1-224ENST00000533129 KRTAP4-7Q9BYR0 210 aa5.06□□□□□ -1.6
CAPN1-224ENST00000533129 MT1LQ93083 61 aa5□□□□□ -1.61
CAPN1-224ENST00000533129 CRCT1Q9UGL9 99 aa4.99□□□□□ -1.61
CAPN1-224ENST00000533129 MT1EP04732 61 aa4.99□□□□□ -1.61
CAPN1-224ENST00000533129 KRTAP2-2Q9BYT5 123 aa4.91□□□□□ -1.62
CAPN1-224ENST00000533129 MACF1Q9UPN3 7388 aaKnown RBP4.86□□□□□ -1.63
CAPN1-224ENST00000533129 KRTAP9-4Q9BYQ2 154 aa4.85□□□□□ -1.63
CAPN1-224ENST00000533129 SPRR2FQ96RM1 72 aa4.8□□□□□ -1.64
CAPN1-224ENST00000533129 LCE1FQ5T754 118 aa4.78□□□□□ -1.64
CAPN1-224ENST00000533129 KRTAP19-3Q7Z4W3 81 aa4.77□□□□□ -1.65
CAPN1-224ENST00000533129 MT1GP13640 62 aa4.74□□□□□ -1.65
CAPN1-224ENST00000533129 KRTAP5-9P26371 169 aa4.71□□□□□ -1.66
CAPN1-224ENST00000533129 MUC12Q9UKN1 5478 aa4.71□□□□□ -1.66
CAPN1-224ENST00000533129 LOC100996750A0A140TA64 210 aa4.7□□□□□ -1.66
CAPN1-224ENST00000533129 KRTAP9-6A0A140TA67 174 aa4.69□□□□□ -1.66
CAPN1-224ENST00000533129 MT1MQ8N339 61 aa4.69□□□□□ -1.66
CAPN1-224ENST00000533129 SYNE2Q8WXH0 6885 aaKnown RBP4.69□□□□□ -1.66
CAPN1-224ENST00000533129 KRTAP4-3Q9BYR4 195 aa4.66□□□□□ -1.66
CAPN1-224ENST00000533129 KRTAP12-4P60329 112 aa4.65□□□□□ -1.66
CAPN1-224ENST00000533129 KRTAP9-9Q9BYP9 154 aa4.65□□□□□ -1.67
CAPN1-224ENST00000533129 KRTAP9-1A8MXZ3 250 aaPredicted RBP4.62□□□□□ -1.67
CAPN1-224ENST00000533129 LCE1AQ5T7P2 110 aa4.57□□□□□ -1.68
CAPN1-224ENST00000533129 KRTAP6-3Q3LI67 103 aa4.56□□□□□ -1.68
CAPN1-224ENST00000533129 SPRR2EP22531 72 aa4.52□□□□□ -1.69
CAPN1-224ENST00000533129 SPRR2BP35325 72 aa4.52□□□□□ -1.69
CAPN1-224ENST00000533129 SPRR2AP35326 72 aa4.52□□□□□ -1.69
CAPN1-224ENST00000533129 LCE1EQ5T753 118 aa4.52□□□□□ -1.69
CAPN1-224ENST00000533129 LCE4AQ5TA78 99 aa4.5□□□□□ -1.69
CAPN1-224ENST00000533129 MDN1Q9NU22 5596 aa4.5□□□□□ -1.69
CAPN1-224ENST00000533129 KRTAP9-7A8MTY7 169 aa4.47□□□□□ -1.69
CAPN1-224ENST00000533129 MT1AP04731 61 aa4.38□□□□□ -1.71
CAPN1-224ENST00000533129 LCE3BQ5TA77 95 aa4.38□□□□□ -1.71
CAPN1-224ENST00000533129 SPRR2DP22532 72 aa4.36□□□□□ -1.71
CAPN1-224ENST00000533129 DSTQ03001 7570 aaKnown RBP4.35□□□□□ -1.71
CAPN1-224ENST00000533129 KRTAP4-9Q9BYQ8 210 aa4.32□□□□□ -1.72
CAPN1-224ENST00000533129 LCE1DQ5T752 114 aa4.31□□□□□ -1.72
CAPN1-224ENST00000533129 LCE3DQ9BYE3 92 aa4.25□□□□□ -1.73
CAPN1-224ENST00000533129 NEBP20929 6669 aa4.24□□□□□ -1.73
CAPN1-224ENST00000533129 KRTAP6-1Q3LI64 71 aa4.23□□□□□ -1.73
CAPN1-224ENST00000533129 LCE3EQ5T5B0 92 aa4.23□□□□□ -1.73
CAPN1-224ENST00000533129 KRTAP5-5Q701N2 237 aaPredicted RBP4.21□□□□□ -1.73
CAPN1-224ENST00000533129 SYNE1Q8NF91 8797 aaKnown RBP4.18□□□□□ -1.74
CAPN1-224ENST00000533129 PRM1P04553 51 aa4.16□□□□□ -1.74
CAPN1-224ENST00000533129 MT3P25713 68 aa3.98□□□□□ -1.77
CAPN1-224ENST00000533129 KRTAP5-4Q6L8H1 288 aa3.97□□□□□ -1.77
CAPN1-224ENST00000533129 KRTAP6-2Q3LI66 62 aa3.96□□□□□ -1.78
CAPN1-224ENST00000533129 KRTAP20-1Q3LI63 56 aa3.85□□□□□ -1.79
CAPN1-224ENST00000533129 MT4P47944 62 aa3.76□□□□□ -1.81
CAPN1-224ENST00000533129 KRTAP4-6Q9BYQ5 205 aa3.74□□□□□ -1.81
CAPN1-224ENST00000533129 KRTAP20-2Q3LI61 65 aa3.7□□□□□ -1.82
CAPN1-224ENST00000533129 HMCN1Q96RW7 5635 aa3.63□□□□□ -1.83
CAPN1-224ENST00000533129 KRTAP5-2Q701N4 177 aa3.62□□□□□ -1.83
CAPN1-224ENST00000533129 OBSCNQ5VST9 7968 aa3.59□□□□□ -1.83
CAPN1-224ENST00000533129 KRTAP5-3Q6L8H2 238 aa3.56□□□□□ -1.84
CAPN1-224ENST00000533129 KRTAP4-12Q9BQ66 201 aa3.26□□□□□ -1.89
CAPN1-224ENST00000533129 MUC5ACP98088 5654 aa3.18□□□□□ -1.9
CAPN1-224ENST00000533129 MUC19Q7Z5P9 8384 aa3.17□□□□□ -1.9
CAPN1-224ENST00000533129 KRTAP4-11Q9BYQ6 195 aa3.17□□□□□ -1.9
CAPN1-224ENST00000533129 AHNAK2Q8IVF2 5795 aa3.15□□□□□ -1.91
CAPN1-224ENST00000533129 KRTAP5-1Q6L8H4 278 aa3.11□□□□□ -1.91
CAPN1-224ENST00000533129 KRTAP5-10Q6L8G5 202 aa3.08□□□□□ -1.92
CAPN1-224ENST00000533129 KRTAP5-8O75690 187 aa3.05□□□□□ -1.92
CAPN1-224ENST00000533129 LCE1BQ5T7P3 118 aa3.05□□□□□ -1.92
CAPN1-224ENST00000533129 LCE1CQ5T751 118 aa3.03□□□□□ -1.92
CAPN1-224ENST00000533129 KRTAP4-2Q9BYR5 136 aa3.02□□□□□ -1.93
CAPN1-224ENST00000533129 KRTAP5-7Q6L8G8 165 aa2.99□□□□□ -1.93
CAPN1-224ENST00000533129 GPR98Q8WXG9 6306 aa2.86□□□□□ -1.95
CAPN1-224ENST00000533129 KRTAP5-6Q6L8G9 129 aaPredicted RBP2.85□□□□□ -1.95
CAPN1-224ENST00000533129 KRTAP21-2Q3LI59 83 aa2.73□□□□□ -1.97
CAPN1-224ENST00000533129 KRTAP21-1Q3LI58 79 aa2.68□□□□□ -1.98
CAPN1-224ENST00000533129 KRTAP5-11Q6L8G4 156 aa2.66□□□□□ -1.98
CAPN1-224ENST00000533129 MUC5BQ9HC84 5762 aaPredicted RBP2.59□□□□□ -1.99
CAPN1-224ENST00000533129 KRTAP4-4Q9BYR3 166 aa2.44□□□□□ -2.02
CAPN1-224ENST00000533129 AHNAKQ09666 5890 aaKnown RBP2.33□□□□□ -2.04
CAPN1-224ENST00000533129 PHGR1C9JFL3 82 aa2.28□□□□□ -2.04
CAPN1-224ENST00000533129 MUC16Q8WXI7 14507 aa1.46□□□□□ -2.18
Retrieved 77 of 20,778 RNA–protein pairs in 12.2 ms