RNA–Protein interactions for RNA: ENST00000532904.5

UBXN1-213, Transcript of UBX domain protein 1, humanhuman

TSL 2

Gene UBXN1, Length 2,073 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBXN1-213ENST00000532904 KRTAP9-1A8MXZ3 250 aaPredicted RBP6.3□□□□□ -1.4
UBXN1-213ENST00000532904 MT1EP04732 61 aa6.26□□□□□ -1.41
UBXN1-213ENST00000532904 KRTAP2-3P0C7H8 128 aa6.23□□□□□ -1.41
UBXN1-213ENST00000532904 KRTAP2-4Q9BYR9 128 aa6.23□□□□□ -1.41
UBXN1-213ENST00000532904 KRTAP2-1Q9BYU5 128 aa6.23□□□□□ -1.41
UBXN1-213ENST00000532904 FCGBPQ9Y6R7 5405 aaPredicted RBP6.22□□□□□ -1.41
UBXN1-213ENST00000532904 KRTAP4-7Q9BYR0 210 aa6.2□□□□□ -1.42
UBXN1-213ENST00000532904 MT1LQ93083 61 aa6.19□□□□□ -1.42
UBXN1-213ENST00000532904 KRTAP19-3Q7Z4W3 81 aa5.95□□□□□ -1.46
UBXN1-213ENST00000532904 MT1GP13640 62 aa5.94□□□□□ -1.46
UBXN1-213ENST00000532904 SPRR2FQ96RM1 72 aa5.89□□□□□ -1.47
UBXN1-213ENST00000532904 MT1MQ8N339 61 aa5.87□□□□□ -1.47
UBXN1-213ENST00000532904 LCE5AQ5TCM9 118 aa5.83□□□□□ -1.48
UBXN1-213ENST00000532904 MACF1Q9UPN3 7388 aaKnown RBP5.81□□□□□ -1.48
UBXN1-213ENST00000532904 MUC12Q9UKN1 5478 aa5.81□□□□□ -1.48
UBXN1-213ENST00000532904 KRTAP6-3Q3LI67 103 aa5.78□□□□□ -1.48
UBXN1-213ENST00000532904 LOC100996750A0A140TA64 210 aa5.78□□□□□ -1.48
UBXN1-213ENST00000532904 KRTAP5-9P26371 169 aa5.78□□□□□ -1.48
UBXN1-213ENST00000532904 KRTAP4-3Q9BYR4 195 aa5.77□□□□□ -1.49
UBXN1-213ENST00000532904 SYNE2Q8WXH0 6885 aaKnown RBP5.74□□□□□ -1.49
UBXN1-213ENST00000532904 LCE1AQ5T7P2 110 aa5.62□□□□□ -1.51
UBXN1-213ENST00000532904 NEBP20929 6669 aa5.59□□□□□ -1.52
UBXN1-213ENST00000532904 KRTAP20-1Q3LI63 56 aa5.57□□□□□ -1.52
UBXN1-213ENST00000532904 SPRR2EP22531 72 aa5.51□□□□□ -1.53
UBXN1-213ENST00000532904 SPRR2BP35325 72 aa5.51□□□□□ -1.53
UBXN1-213ENST00000532904 SPRR2AP35326 72 aa5.51□□□□□ -1.53
UBXN1-213ENST00000532904 KRTAP12-4P60329 112 aa5.5□□□□□ -1.53
UBXN1-213ENST00000532904 MDN1Q9NU22 5596 aa5.49□□□□□ -1.53
UBXN1-213ENST00000532904 DSTQ03001 7570 aaKnown RBP5.34□□□□□ -1.56
UBXN1-213ENST00000532904 LCE3BQ5TA77 95 aa5.32□□□□□ -1.56
UBXN1-213ENST00000532904 SPRR2DP22532 72 aa5.3□□□□□ -1.56
UBXN1-213ENST00000532904 MT1AP04731 61 aa5.28□□□□□ -1.56
UBXN1-213ENST00000532904 KRTAP5-5Q701N2 237 aaPredicted RBP5.28□□□□□ -1.56
UBXN1-213ENST00000532904 KRTAP4-9Q9BYQ8 210 aa5.23□□□□□ -1.57
UBXN1-213ENST00000532904 KRTAP6-1Q3LI64 71 aa5.21□□□□□ -1.58
UBXN1-213ENST00000532904 KRTAP2-2Q9BYT5 123 aa5.11□□□□□ -1.59
UBXN1-213ENST00000532904 LCE3DQ9BYE3 92 aa5.09□□□□□ -1.59
UBXN1-213ENST00000532904 LCE3EQ5T5B0 92 aa5.05□□□□□ -1.6
UBXN1-213ENST00000532904 SYNE1Q8NF91 8797 aaKnown RBP5.05□□□□□ -1.6
UBXN1-213ENST00000532904 KRTAP9-4Q9BYQ2 154 aa4.96□□□□□ -1.61
UBXN1-213ENST00000532904 KRTAP5-4Q6L8H1 288 aa4.91□□□□□ -1.62
UBXN1-213ENST00000532904 GPR98Q8WXG9 6306 aa4.89□□□□□ -1.63
UBXN1-213ENST00000532904 PRM1P04553 51 aa4.88□□□□□ -1.63
UBXN1-213ENST00000532904 MT3P25713 68 aa4.75□□□□□ -1.65
UBXN1-213ENST00000532904 LCE4AQ5TA78 99 aa4.74□□□□□ -1.65
UBXN1-213ENST00000532904 KRTAP6-2Q3LI66 62 aa4.73□□□□□ -1.65
UBXN1-213ENST00000532904 KRTAP4-6Q9BYQ5 205 aa4.6□□□□□ -1.67
UBXN1-213ENST00000532904 MT4P47944 62 aa4.57□□□□□ -1.68
UBXN1-213ENST00000532904 KRTAP20-2Q3LI61 65 aa4.55□□□□□ -1.68
UBXN1-213ENST00000532904 KRTAP5-2Q701N4 177 aa4.5□□□□□ -1.69
UBXN1-213ENST00000532904 LCE1DQ5T752 114 aa4.46□□□□□ -1.7
UBXN1-213ENST00000532904 HMCN1Q96RW7 5635 aa4.41□□□□□ -1.7
UBXN1-213ENST00000532904 AHNAK2Q8IVF2 5795 aa4.39□□□□□ -1.71
UBXN1-213ENST00000532904 KRTAP5-3Q6L8H2 238 aa4.39□□□□□ -1.71
UBXN1-213ENST00000532904 KRTAP5-10Q6L8G5 202 aa4.36□□□□□ -1.71
UBXN1-213ENST00000532904 OBSCNQ5VST9 7968 aa4.3□□□□□ -1.72
UBXN1-213ENST00000532904 KRTAP5-7Q6L8G8 165 aa4.29□□□□□ -1.72
UBXN1-213ENST00000532904 LCE1EQ5T753 118 aa4.07□□□□□ -1.76
UBXN1-213ENST00000532904 MUC5ACP98088 5654 aa3.88□□□□□ -1.79
UBXN1-213ENST00000532904 KRTAP4-11Q9BYQ6 195 aa3.87□□□□□ -1.79
UBXN1-213ENST00000532904 KRTAP5-1Q6L8H4 278 aa3.84□□□□□ -1.79
UBXN1-213ENST00000532904 AHNAKQ09666 5890 aaKnown RBP3.81□□□□□ -1.8
UBXN1-213ENST00000532904 LCE1CQ5T751 118 aa3.79□□□□□ -1.8
UBXN1-213ENST00000532904 LCE1BQ5T7P3 118 aa3.79□□□□□ -1.8
UBXN1-213ENST00000532904 KRTAP4-2Q9BYR5 136 aa3.77□□□□□ -1.81
UBXN1-213ENST00000532904 KRTAP5-8O75690 187 aa3.72□□□□□ -1.81
UBXN1-213ENST00000532904 MUC5BQ9HC84 5762 aaPredicted RBP3.64□□□□□ -1.83
UBXN1-213ENST00000532904 KRTAP5-6Q6L8G9 129 aaPredicted RBP3.59□□□□□ -1.83
UBXN1-213ENST00000532904 KRTAP9-9Q9BYP9 154 aa3.51□□□□□ -1.85
UBXN1-213ENST00000532904 KRTAP21-2Q3LI59 83 aa3.4□□□□□ -1.86
UBXN1-213ENST00000532904 KRTAP5-11Q6L8G4 156 aa3.32□□□□□ -1.88
UBXN1-213ENST00000532904 KRTAP21-1Q3LI58 79 aa3.12□□□□□ -1.91
UBXN1-213ENST00000532904 KRTAP4-4Q9BYR3 166 aa3.03□□□□□ -1.92
UBXN1-213ENST00000532904 KRTAP4-12Q9BQ66 201 aa3□□□□□ -1.93
UBXN1-213ENST00000532904 LCE1FQ5T754 118 aa2.92□□□□□ -1.94
UBXN1-213ENST00000532904 PHGR1C9JFL3 82 aa2.84□□□□□ -1.95
UBXN1-213ENST00000532904 MUC19Q7Z5P9 8384 aa2.79□□□□□ -1.96
UBXN1-213ENST00000532904 MUC16Q8WXI7 14507 aa1.89□□□□□ -2.11
Retrieved 78 of 20,778 RNA–protein pairs in 71.6 ms