RNA–Protein interactions for RNA: ENST00000532550.1

PHRF1-204, Transcript of PHD and ring finger domains 1, humanhuman

TSL 3

Gene PHRF1, Length 748 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PHRF1-204ENST00000532550 PCP4P48539 62 aa5.99□□□□□ -1.45
PHRF1-204ENST00000532550 Q1T7F1 81 aa5.99□□□□□ -1.45
PHRF1-204ENST00000532550 MIR22HGQ0VDD5 57 aa5.97□□□□□ -1.45
PHRF1-204ENST00000532550 PSPHP1O15172 72 aa5.96□□□□□ -1.46
PHRF1-204ENST00000532550 KRTAP4-3Q9BYR4 195 aa5.96□□□□□ -1.46
PHRF1-204ENST00000532550 LCE4AQ5TA78 99 aa5.95□□□□□ -1.46
PHRF1-204ENST00000532550 V9GYY9 64 aa5.95□□□□□ -1.46
PHRF1-204ENST00000532550 KRTAP12-3P60328 96 aa5.94□□□□□ -1.46
PHRF1-204ENST00000532550 LCE1DQ5T752 114 aa5.93□□□□□ -1.46
PHRF1-204ENST00000532550 K7ERS5 55 aa5.91□□□□□ -1.46
PHRF1-204ENST00000532550 MT4P47944 62 aa5.89□□□□□ -1.47
PHRF1-204ENST00000532550 KRTAP25-1Q3LHN0 102 aa5.87□□□□□ -1.47
PHRF1-204ENST00000532550 RPS28P62857 69 aaKnown RBP5.83□□□□□ -1.48
PHRF1-204ENST00000532550 KRTAP4-7Q9BYR0 210 aa5.82□□□□□ -1.48
PHRF1-204ENST00000532550 KRTAP5-4Q6L8H1 288 aa5.8□□□□□ -1.48
PHRF1-204ENST00000532550 GPR98Q8WXG9 6306 aa5.8□□□□□ -1.48
PHRF1-204ENST00000532550 HMCN1Q96RW7 5635 aa5.77□□□□□ -1.49
PHRF1-204ENST00000532550 A6NED7 52 aa5.73□□□□□ -1.49
PHRF1-204ENST00000532550 KRTAP4-6Q9BYQ5 205 aa5.71□□□□□ -1.5
PHRF1-204ENST00000532550 KRTAP23-1A1A580 65 aa5.65□□□□□ -1.5
PHRF1-204ENST00000532550 KRTAP19-4Q3LI73 84 aa5.64□□□□□ -1.51
PHRF1-204ENST00000532550 KRTAP5-5Q701N2 237 aaPredicted RBP5.57□□□□□ -1.52
PHRF1-204ENST00000532550 KRTAP15-1Q3LI76 137 aa5.56□□□□□ -1.52
PHRF1-204ENST00000532550 CDC42SE1Q9NRR8 79 aa5.56□□□□□ -1.52
PHRF1-204ENST00000532550 AHNAK2Q8IVF2 5795 aa5.54□□□□□ -1.52
PHRF1-204ENST00000532550 LOC100996750A0A140TA64 210 aa5.52□□□□□ -1.53
PHRF1-204ENST00000532550 KRTAP12-4P60329 112 aa5.5□□□□□ -1.53
PHRF1-204ENST00000532550 KRTAP20-2Q3LI61 65 aa5.49□□□□□ -1.53
PHRF1-204ENST00000532550 KRTAP5-10Q6L8G5 202 aa5.49□□□□□ -1.53
PHRF1-204ENST00000532550 SPRR5A0A1B0GTR4 108 aa5.48□□□□□ -1.53
PHRF1-204ENST00000532550 LCE3CQ5T5A8 94 aa5.48□□□□□ -1.53
PHRF1-204ENST00000532550 ROMO1P60602 79 aa5.46□□□□□ -1.54
PHRF1-204ENST00000532550 KRTAP5-3Q6L8H2 238 aa5.39□□□□□ -1.55
PHRF1-204ENST00000532550 SYNE1Q8NF91 8797 aaKnown RBP5.32□□□□□ -1.56
PHRF1-204ENST00000532550 KRTAP5-7Q6L8G8 165 aa5.28□□□□□ -1.56
PHRF1-204ENST00000532550 MT1AP04731 61 aa5.21□□□□□ -1.58
PHRF1-204ENST00000532550 KRTAP6-1Q3LI64 71 aa5.18□□□□□ -1.58
PHRF1-204ENST00000532550 KRTAP9-6A8MVA2 160 aa5.12□□□□□ -1.59
PHRF1-204ENST00000532550 BRK1Q8WUW1 75 aa5.08□□□□□ -1.6
PHRF1-204ENST00000532550 KRTAP5-2Q701N4 177 aa5.07□□□□□ -1.6
PHRF1-204ENST00000532550 KRTAP9-4Q9BYQ2 154 aa5.06□□□□□ -1.6
PHRF1-204ENST00000532550 SVIPQ8NHG7 77 aa5.02□□□□□ -1.61
PHRF1-204ENST00000532550 KRTAP4-11Q9BYQ6 195 aa5.02□□□□□ -1.61
PHRF1-204ENST00000532550 KRTAP6-2Q3LI66 62 aa4.96□□□□□ -1.62
PHRF1-204ENST00000532550 KRTAP5-8O75690 187 aa4.84□□□□□ -1.63
PHRF1-204ENST00000532550 PRO0628Q9UI54 55 aa4.81□□□□□ -1.64
PHRF1-204ENST00000532550 MT3P25713 68 aa4.8□□□□□ -1.64
PHRF1-204ENST00000532550 PMAIP1Q13794 54 aa4.79□□□□□ -1.64
PHRF1-204ENST00000532550 OBSCNQ5VST9 7968 aa4.73□□□□□ -1.65
PHRF1-204ENST00000532550 PRAC1Q96KF2 57 aa4.64□□□□□ -1.67
PHRF1-204ENST00000532550 KRTAP9-9Q9BYP9 154 aa4.63□□□□□ -1.67
PHRF1-204ENST00000532550 MUC5BQ9HC84 5762 aaPredicted RBP4.57□□□□□ -1.68
PHRF1-204ENST00000532550 KRTAP5-1Q6L8H4 278 aa4.56□□□□□ -1.68
PHRF1-204ENST00000532550 MUC5ACP98088 5654 aa4.54□□□□□ -1.68
PHRF1-204ENST00000532550 AHNAKQ09666 5890 aaKnown RBP4.53□□□□□ -1.68
PHRF1-204ENST00000532550 KTN1-AS1Q86SY8 53 aa4.48□□□□□ -1.69
PHRF1-204ENST00000532550 LCE1EQ5T753 118 aa4.39□□□□□ -1.71
PHRF1-204ENST00000532550 LCE1BQ5T7P3 118 aa4.16□□□□□ -1.74
PHRF1-204ENST00000532550 KRTAP4-2Q9BYR5 136 aa4.12□□□□□ -1.75
PHRF1-204ENST00000532550 LCE1CQ5T751 118 aa4.07□□□□□ -1.76
PHRF1-204ENST00000532550 LCE3DQ9BYE3 92 aa3.96□□□□□ -1.78
PHRF1-204ENST00000532550 LUZP6Q538Z0 58 aa3.78□□□□□ -1.8
PHRF1-204ENST00000532550 KRTAP4-12Q9BQ66 201 aa3.77□□□□□ -1.81
PHRF1-204ENST00000532550 LCE3EQ5T5B0 92 aa3.73□□□□□ -1.81
PHRF1-204ENST00000532550 KRTAP5-6Q6L8G9 129 aaPredicted RBP3.69□□□□□ -1.82
PHRF1-204ENST00000532550 KRTAP5-11Q6L8G4 156 aa3.67□□□□□ -1.82
PHRF1-204ENST00000532550 LCE1FQ5T754 118 aa3.6□□□□□ -1.83
PHRF1-204ENST00000532550 H3BS24 57 aa3.44□□□□□ -1.86
PHRF1-204ENST00000532550 NDUFAF8A1L188 74 aa3.43□□□□□ -1.86
PHRF1-204ENST00000532550 KRTAP21-2Q3LI59 83 aa3.41□□□□□ -1.86
PHRF1-204ENST00000532550 A0A0A0MQY5 61 aa3.32□□□□□ -1.88
PHRF1-204ENST00000532550 PHGR1C9JFL3 82 aa3.22□□□□□ -1.89
PHRF1-204ENST00000532550 KRTAP4-4Q9BYR3 166 aa3.14□□□□□ -1.91
PHRF1-204ENST00000532550 MUC19Q7Z5P9 8384 aa2.92□□□□□ -1.94
PHRF1-204ENST00000532550 INE1O15225 51 aa2.87□□□□□ -1.95
PHRF1-204ENST00000532550 PRM1P04553 51 aa2.81□□□□□ -1.96
PHRF1-204ENST00000532550 KRTAP21-1Q3LI58 79 aa2.44□□□□□ -2.02
PHRF1-204ENST00000532550 MUC16Q8WXI7 14507 aa2.02□□□□□ -2.09
Retrieved 78 of 20,778 RNA–protein pairs in 187.1 ms