RNA–Protein interactions for RNA: ENST00000532451.1

SORL1-210, Transcript of sortilin related receptor 1, humanhuman

TSL 1 (best)

Gene SORL1, Length 2,165 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SORL1-210ENST00000532451 FCGBPQ9Y6R7 5405 aaPredicted RBP7.95□□□□□ -1.14
SORL1-210ENST00000532451 CRCT1Q9UGL9 99 aa7.93□□□□□ -1.14
SORL1-210ENST00000532451 KRTAP2-3P0C7H8 128 aa7.87□□□□□ -1.15
SORL1-210ENST00000532451 KRTAP2-4Q9BYR9 128 aa7.87□□□□□ -1.15
SORL1-210ENST00000532451 KRTAP2-1Q9BYU5 128 aa7.87□□□□□ -1.15
SORL1-210ENST00000532451 KRTAP19-3Q7Z4W3 81 aa7.81□□□□□ -1.16
SORL1-210ENST00000532451 MT1GP13640 62 aa7.77□□□□□ -1.17
SORL1-210ENST00000532451 MT1MQ8N339 61 aa7.77□□□□□ -1.17
SORL1-210ENST00000532451 KRTAP4-3Q9BYR4 195 aa7.76□□□□□ -1.17
SORL1-210ENST00000532451 MUC12Q9UKN1 5478 aa7.72□□□□□ -1.17
SORL1-210ENST00000532451 KRTAP9-6A0A140TA67 174 aa7.7□□□□□ -1.18
SORL1-210ENST00000532451 MACF1Q9UPN3 7388 aaKnown RBP7.68□□□□□ -1.18
SORL1-210ENST00000532451 LOC100996750A0A140TA64 210 aa7.66□□□□□ -1.18
SORL1-210ENST00000532451 SPRR2FQ96RM1 72 aa7.62□□□□□ -1.19
SORL1-210ENST00000532451 LCE5AQ5TCM9 118 aa7.57□□□□□ -1.2
SORL1-210ENST00000532451 SYNE2Q8WXH0 6885 aaKnown RBP7.54□□□□□ -1.2
SORL1-210ENST00000532451 KRTAP9-1A8MXZ3 250 aaPredicted RBP7.36□□□□□ -1.23
SORL1-210ENST00000532451 DSTQ03001 7570 aaKnown RBP7.23□□□□□ -1.25
SORL1-210ENST00000532451 KRTAP5-9P26371 169 aa7.22□□□□□ -1.25
SORL1-210ENST00000532451 LCE1AQ5T7P2 110 aa7.16□□□□□ -1.26
SORL1-210ENST00000532451 MDN1Q9NU22 5596 aa7.12□□□□□ -1.27
SORL1-210ENST00000532451 KRTAP6-3Q3LI67 103 aa7.05□□□□□ -1.28
SORL1-210ENST00000532451 KRTAP9-7A8MTY7 169 aa7.03□□□□□ -1.28
SORL1-210ENST00000532451 SPRR2EP22531 72 aa7.02□□□□□ -1.29
SORL1-210ENST00000532451 SPRR2BP35325 72 aa7.02□□□□□ -1.29
SORL1-210ENST00000532451 SPRR2AP35326 72 aa7.02□□□□□ -1.29
SORL1-210ENST00000532451 LCE3BQ5TA77 95 aa7□□□□□ -1.29
SORL1-210ENST00000532451 KRTAP6-1Q3LI64 71 aa6.98□□□□□ -1.29
SORL1-210ENST00000532451 MT1AP04731 61 aa6.96□□□□□ -1.29
SORL1-210ENST00000532451 KRTAP5-5Q701N2 237 aaPredicted RBP6.91□□□□□ -1.3
SORL1-210ENST00000532451 KRTAP12-4P60329 112 aa6.86□□□□□ -1.31
SORL1-210ENST00000532451 KRTAP4-9Q9BYQ8 210 aa6.78□□□□□ -1.32
SORL1-210ENST00000532451 NEBP20929 6669 aa6.75□□□□□ -1.33
SORL1-210ENST00000532451 SPRR2DP22532 72 aa6.73□□□□□ -1.33
SORL1-210ENST00000532451 SYNE1Q8NF91 8797 aaKnown RBP6.64□□□□□ -1.35
SORL1-210ENST00000532451 KRTAP9-4Q9BYQ2 154 aa6.57□□□□□ -1.36
SORL1-210ENST00000532451 LCE3DQ9BYE3 92 aa6.56□□□□□ -1.36
SORL1-210ENST00000532451 LCE3EQ5T5B0 92 aa6.46□□□□□ -1.38
SORL1-210ENST00000532451 KRTAP6-2Q3LI66 62 aa6.3□□□□□ -1.4
SORL1-210ENST00000532451 MT3P25713 68 aa6.27□□□□□ -1.41
SORL1-210ENST00000532451 KRTAP5-4Q6L8H1 288 aa6.21□□□□□ -1.42
SORL1-210ENST00000532451 KRTAP20-1Q3LI63 56 aa6.2□□□□□ -1.42
SORL1-210ENST00000532451 KRTAP2-2Q9BYT5 123 aa6.06□□□□□ -1.44
SORL1-210ENST00000532451 PRM1P04553 51 aa6.04□□□□□ -1.44
SORL1-210ENST00000532451 KRTAP4-6Q9BYQ5 205 aa5.93□□□□□ -1.46
SORL1-210ENST00000532451 LCE4AQ5TA78 99 aa5.9□□□□□ -1.47
SORL1-210ENST00000532451 MT4P47944 62 aa5.89□□□□□ -1.47
SORL1-210ENST00000532451 KRTAP20-2Q3LI61 65 aa5.82□□□□□ -1.48
SORL1-210ENST00000532451 OBSCNQ5VST9 7968 aa5.8□□□□□ -1.48
SORL1-210ENST00000532451 KRTAP5-2Q701N4 177 aa5.77□□□□□ -1.49
SORL1-210ENST00000532451 HMCN1Q96RW7 5635 aa5.71□□□□□ -1.5
SORL1-210ENST00000532451 LCE1DQ5T752 114 aa5.7□□□□□ -1.5
SORL1-210ENST00000532451 KRTAP5-3Q6L8H2 238 aa5.56□□□□□ -1.52
SORL1-210ENST00000532451 LCE1EQ5T753 118 aa5.21□□□□□ -1.58
SORL1-210ENST00000532451 MUC5ACP98088 5654 aa5.19□□□□□ -1.58
SORL1-210ENST00000532451 AHNAK2Q8IVF2 5795 aa5.11□□□□□ -1.59
SORL1-210ENST00000532451 LCE1BQ5T7P3 118 aa5.04□□□□□ -1.6
SORL1-210ENST00000532451 KRTAP5-10Q6L8G5 202 aa4.94□□□□□ -1.62
SORL1-210ENST00000532451 KRTAP5-1Q6L8H4 278 aa4.91□□□□□ -1.62
SORL1-210ENST00000532451 KRTAP4-2Q9BYR5 136 aa4.91□□□□□ -1.62
SORL1-210ENST00000532451 LCE1CQ5T751 118 aa4.89□□□□□ -1.63
SORL1-210ENST00000532451 KRTAP4-11Q9BYQ6 195 aa4.86□□□□□ -1.63
SORL1-210ENST00000532451 GPR98Q8WXG9 6306 aa4.78□□□□□ -1.64
SORL1-210ENST00000532451 KRTAP5-8O75690 187 aa4.68□□□□□ -1.66
SORL1-210ENST00000532451 KRTAP5-6Q6L8G9 129 aaPredicted RBP4.63□□□□□ -1.67
SORL1-210ENST00000532451 KRTAP5-7Q6L8G8 165 aa4.6□□□□□ -1.67
SORL1-210ENST00000532451 KRTAP21-2Q3LI59 83 aa4.53□□□□□ -1.68
SORL1-210ENST00000532451 KRTAP5-11Q6L8G4 156 aa4.24□□□□□ -1.73
SORL1-210ENST00000532451 KRTAP9-9Q9BYP9 154 aa4.23□□□□□ -1.73
SORL1-210ENST00000532451 MUC5BQ9HC84 5762 aaPredicted RBP4.17□□□□□ -1.74
SORL1-210ENST00000532451 KRTAP4-4Q9BYR3 166 aa4.07□□□□□ -1.76
SORL1-210ENST00000532451 KRTAP4-12Q9BQ66 201 aa3.95□□□□□ -1.78
SORL1-210ENST00000532451 AHNAKQ09666 5890 aaKnown RBP3.88□□□□□ -1.79
SORL1-210ENST00000532451 KRTAP21-1Q3LI58 79 aa3.79□□□□□ -1.8
SORL1-210ENST00000532451 PHGR1C9JFL3 82 aa3.65□□□□□ -1.82
SORL1-210ENST00000532451 MUC19Q7Z5P9 8384 aa3.6□□□□□ -1.83
SORL1-210ENST00000532451 LCE1FQ5T754 118 aa3.58□□□□□ -1.84
SORL1-210ENST00000532451 MUC16Q8WXI7 14507 aa2.43□□□□□ -2.02
Retrieved 78 of 20,778 RNA–protein pairs in 52.4 ms