RNA–Protein interactions for RNA: ENST00000532449.5

CHEK1-213, Transcript of checkpoint kinase 1, humanhuman

TSL 2 BASIC

Gene CHEK1, Length 4,051 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHEK1-213ENST00000532449 KRTAP9-6A8MVA2 160 aa3.72□□□□□ -1.81
CHEK1-213ENST00000532449 LCE3BQ5TA77 95 aa3.7□□□□□ -1.82
CHEK1-213ENST00000532449 KRTAP12-4P60329 112 aa3.68□□□□□ -1.82
CHEK1-213ENST00000532449 SPRR2FQ96RM1 72 aa3.64□□□□□ -1.83
CHEK1-213ENST00000532449 SSPOA2VEC9 5147 aa3.61□□□□□ -1.83
CHEK1-213ENST00000532449 KRTAP4-9Q9BYQ8 210 aa3.57□□□□□ -1.84
CHEK1-213ENST00000532449 MT1LQ93083 61 aa3.56□□□□□ -1.84
CHEK1-213ENST00000532449 KRTAP19-7Q3SYF9 63 aa3.56□□□□□ -1.84
CHEK1-213ENST00000532449 KRTAP19-4Q3LI73 84 aa3.56□□□□□ -1.84
CHEK1-213ENST00000532449 MT1EP04732 61 aa3.52□□□□□ -1.85
CHEK1-213ENST00000532449 KRTAP9-2Q9BYQ4 174 aa3.5□□□□□ -1.85
CHEK1-213ENST00000532449 LCE2DQ5TA82 110 aaPredicted RBP3.42□□□□□ -1.86
CHEK1-213ENST00000532449 KRTAP19-6Q3LI70 58 aa3.4□□□□□ -1.86
CHEK1-213ENST00000532449 KRTAP2-3P0C7H8 128 aa3.38□□□□□ -1.87
CHEK1-213ENST00000532449 KRTAP2-4Q9BYR9 128 aa3.38□□□□□ -1.87
CHEK1-213ENST00000532449 KRTAP2-1Q9BYU5 128 aa3.38□□□□□ -1.87
CHEK1-213ENST00000532449 MACF1Q9UPN3 7388 aaKnown RBP3.38□□□□□ -1.87
CHEK1-213ENST00000532449 MT1MQ8N339 61 aa3.34□□□□□ -1.87
CHEK1-213ENST00000532449 KRTAP19-3Q7Z4W3 81 aa3.33□□□□□ -1.88
CHEK1-213ENST00000532449 LCE3DQ9BYE3 92 aa3.3□□□□□ -1.88
CHEK1-213ENST00000532449 PRM1P04553 51 aa3.28□□□□□ -1.88
CHEK1-213ENST00000532449 LCE3EQ5T5B0 92 aa3.22□□□□□ -1.89
CHEK1-213ENST00000532449 KRTAP9-7A8MTY7 169 aa3.22□□□□□ -1.89
CHEK1-213ENST00000532449 SPRR2EP22531 72 aa3.2□□□□□ -1.9
CHEK1-213ENST00000532449 SPRR2BP35325 72 aa3.2□□□□□ -1.9
CHEK1-213ENST00000532449 SPRR2AP35326 72 aa3.2□□□□□ -1.9
CHEK1-213ENST00000532449 KRTAP9-6A0A140TA67 174 aa3.19□□□□□ -1.9
CHEK1-213ENST00000532449 MDN1Q9NU22 5596 aa3.18□□□□□ -1.9
CHEK1-213ENST00000532449 KRTAP6-1Q3LI64 71 aa3.14□□□□□ -1.91
CHEK1-213ENST00000532449 MUC19Q7Z5P9 8384 aa3.11□□□□□ -1.91
CHEK1-213ENST00000532449 KRTAP9-1A8MXZ3 250 aaPredicted RBP3.09□□□□□ -1.92
CHEK1-213ENST00000532449 SPRR2DP22532 72 aa3.08□□□□□ -1.92
CHEK1-213ENST00000532449 KRTAP6-2Q3LI66 62 aa2.98□□□□□ -1.93
CHEK1-213ENST00000532449 LCE5AQ5TCM9 118 aa2.98□□□□□ -1.93
CHEK1-213ENST00000532449 LCE1AQ5T7P2 110 aa2.97□□□□□ -1.93
CHEK1-213ENST00000532449 MT1AP04731 61 aa2.94□□□□□ -1.94
CHEK1-213ENST00000532449 MT4P47944 62 aa2.94□□□□□ -1.94
CHEK1-213ENST00000532449 KRTAP5-9P26371 169 aa2.93□□□□□ -1.94
CHEK1-213ENST00000532449 KRTAP6-3Q3LI67 103 aa2.92□□□□□ -1.94
CHEK1-213ENST00000532449 MT3P25713 68 aa2.84□□□□□ -1.95
CHEK1-213ENST00000532449 LCE1DQ5T752 114 aa2.83□□□□□ -1.96
CHEK1-213ENST00000532449 LCE1BQ5T7P3 118 aa2.82□□□□□ -1.96
CHEK1-213ENST00000532449 KRTAP5-5Q701N2 237 aaPredicted RBP2.77□□□□□ -1.97
CHEK1-213ENST00000532449 NEBP20929 6669 aa2.77□□□□□ -1.97
CHEK1-213ENST00000532449 KRTAP9-4Q9BYQ2 154 aa2.73□□□□□ -1.97
CHEK1-213ENST00000532449 KRTAP2-2Q9BYT5 123 aa2.67□□□□□ -1.98
CHEK1-213ENST00000532449 KRTAP20-1Q3LI63 56 aa2.59□□□□□ -1.99
CHEK1-213ENST00000532449 KRTAP4-6Q9BYQ5 205 aa2.59□□□□□ -2
CHEK1-213ENST00000532449 MUC5ACP98088 5654 aa2.57□□□□□ -2
CHEK1-213ENST00000532449 KRTAP4-11Q9BYQ6 195 aa2.57□□□□□ -2
CHEK1-213ENST00000532449 LCE1EQ5T753 118 aa2.56□□□□□ -2
CHEK1-213ENST00000532449 LCE4AQ5TA78 99 aa2.52□□□□□ -2.01
CHEK1-213ENST00000532449 HMCN1Q96RW7 5635 aa2.48□□□□□ -2.01
CHEK1-213ENST00000532449 KRTAP5-4Q6L8H1 288 aa2.42□□□□□ -2.02
CHEK1-213ENST00000532449 KRTAP20-2Q3LI61 65 aa2.39□□□□□ -2.03
CHEK1-213ENST00000532449 KRTAP4-4Q9BYR3 166 aa2.36□□□□□ -2.03
CHEK1-213ENST00000532449 KRTAP5-3Q6L8H2 238 aa2.22□□□□□ -2.05
CHEK1-213ENST00000532449 KRTAP5-2Q701N4 177 aa2.18□□□□□ -2.06
CHEK1-213ENST00000532449 KRTAP4-12Q9BQ66 201 aa2.18□□□□□ -2.06
CHEK1-213ENST00000532449 KRTAP4-2Q9BYR5 136 aa2.18□□□□□ -2.06
CHEK1-213ENST00000532449 LCE1FQ5T754 118 aa2.17□□□□□ -2.06
CHEK1-213ENST00000532449 LCE1CQ5T751 118 aa2.08□□□□□ -2.08
CHEK1-213ENST00000532449 GPR98Q8WXG9 6306 aa2.08□□□□□ -2.08
CHEK1-213ENST00000532449 AHNAK2Q8IVF2 5795 aa2.08□□□□□ -2.08
CHEK1-213ENST00000532449 MUC5BQ9HC84 5762 aaPredicted RBP2.07□□□□□ -2.08
CHEK1-213ENST00000532449 KRTAP5-10Q6L8G5 202 aa2.03□□□□□ -2.08
CHEK1-213ENST00000532449 KRTAP9-9Q9BYP9 154 aa2□□□□□ -2.09
CHEK1-213ENST00000532449 KRTAP5-1Q6L8H4 278 aa1.96□□□□□ -2.1
CHEK1-213ENST00000532449 KRTAP5-8O75690 187 aa1.96□□□□□ -2.1
CHEK1-213ENST00000532449 KRTAP21-2Q3LI59 83 aa1.76□□□□□ -2.13
CHEK1-213ENST00000532449 KRTAP5-7Q6L8G8 165 aa1.73□□□□□ -2.13
CHEK1-213ENST00000532449 AHNAKQ09666 5890 aaKnown RBP1.65□□□□□ -2.15
CHEK1-213ENST00000532449 KRTAP5-6Q6L8G9 129 aaPredicted RBP1.63□□□□□ -2.15
CHEK1-213ENST00000532449 KRTAP5-11Q6L8G4 156 aa1.61□□□□□ -2.15
CHEK1-213ENST00000532449 KRTAP21-1Q3LI58 79 aa1.58□□□□□ -2.16
CHEK1-213ENST00000532449 PHGR1C9JFL3 82 aa1.4□□□□□ -2.18
CHEK1-213ENST00000532449 MUC16Q8WXI7 14507 aa0.92□□□□□ -2.26
Retrieved 77 of 20,778 RNA–protein pairs in 68.4 ms