RNA–Protein interactions for RNA: ENST00000532445.1

NCAPD3-209, Transcript of non-SMC condensin II complex subunit D3, humanhuman

APPRIS ALT2 TSL 3

Gene NCAPD3, Length 532 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NCAPD3-209ENST00000532445 MIR22HGQ0VDD5 57 aa8.25□□□□□ -1.09
NCAPD3-209ENST00000532445 MT1MQ8N339 61 aa8.24□□□□□ -1.09
NCAPD3-209ENST00000532445 MT1LQ93083 61 aa8.24□□□□□ -1.09
NCAPD3-209ENST00000532445 PSPHP1O15172 72 aa8.19□□□□□ -1.1
NCAPD3-209ENST00000532445 PCP4P48539 62 aa8.1□□□□□ -1.11
NCAPD3-209ENST00000532445 LCE4AQ5TA78 99 aa8.1□□□□□ -1.11
NCAPD3-209ENST00000532445 LCE1DQ5T752 114 aa8.09□□□□□ -1.11
NCAPD3-209ENST00000532445 K7ERS5 55 aa8.06□□□□□ -1.12
NCAPD3-209ENST00000532445 RPS28P62857 69 aaKnown RBP8.05□□□□□ -1.12
NCAPD3-209ENST00000532445 MT4P47944 62 aa8.01□□□□□ -1.13
NCAPD3-209ENST00000532445 KRTAP4-3Q9BYR4 195 aa8.01□□□□□ -1.13
NCAPD3-209ENST00000532445 GPR98Q8WXG9 6306 aa7.99□□□□□ -1.13
NCAPD3-209ENST00000532445 KRTAP12-3P60328 96 aa7.96□□□□□ -1.14
NCAPD3-209ENST00000532445 A6NED7 52 aa7.94□□□□□ -1.14
NCAPD3-209ENST00000532445 KRTAP25-1Q3LHN0 102 aa7.93□□□□□ -1.14
NCAPD3-209ENST00000532445 KRTAP5-4Q6L8H1 288 aa7.88□□□□□ -1.15
NCAPD3-209ENST00000532445 KRTAP4-7Q9BYR0 210 aa7.8□□□□□ -1.16
NCAPD3-209ENST00000532445 HMCN1Q96RW7 5635 aa7.8□□□□□ -1.16
NCAPD3-209ENST00000532445 KRTAP4-6Q9BYQ5 205 aa7.73□□□□□ -1.17
NCAPD3-209ENST00000532445 KRTAP23-1A1A580 65 aa7.68□□□□□ -1.18
NCAPD3-209ENST00000532445 CDC42SE1Q9NRR8 79 aa7.65□□□□□ -1.18
NCAPD3-209ENST00000532445 AHNAK2Q8IVF2 5795 aa7.55□□□□□ -1.2
NCAPD3-209ENST00000532445 ROMO1P60602 79 aa7.55□□□□□ -1.2
NCAPD3-209ENST00000532445 KRTAP5-10Q6L8G5 202 aa7.54□□□□□ -1.2
NCAPD3-209ENST00000532445 KRTAP5-5Q701N2 237 aaPredicted RBP7.53□□□□□ -1.2
NCAPD3-209ENST00000532445 KRTAP19-4Q3LI73 84 aa7.52□□□□□ -1.21
NCAPD3-209ENST00000532445 KRTAP20-2Q3LI61 65 aa7.47□□□□□ -1.21
NCAPD3-209ENST00000532445 SPRR5A0A1B0GTR4 108 aa7.44□□□□□ -1.22
NCAPD3-209ENST00000532445 KRTAP12-4P60329 112 aa7.43□□□□□ -1.22
NCAPD3-209ENST00000532445 LOC100996750A0A140TA64 210 aa7.4□□□□□ -1.22
NCAPD3-209ENST00000532445 KRTAP15-1Q3LI76 137 aa7.4□□□□□ -1.22
NCAPD3-209ENST00000532445 KRTAP5-3Q6L8H2 238 aa7.37□□□□□ -1.23
NCAPD3-209ENST00000532445 LCE3CQ5T5A8 94 aa7.3□□□□□ -1.24
NCAPD3-209ENST00000532445 KRTAP5-7Q6L8G8 165 aa7.27□□□□□ -1.25
NCAPD3-209ENST00000532445 SYNE1Q8NF91 8797 aaKnown RBP7.11□□□□□ -1.27
NCAPD3-209ENST00000532445 BRK1Q8WUW1 75 aa7.04□□□□□ -1.28
NCAPD3-209ENST00000532445 MT1AP04731 61 aa7.03□□□□□ -1.28
NCAPD3-209ENST00000532445 KRTAP6-1Q3LI64 71 aa6.97□□□□□ -1.29
NCAPD3-209ENST00000532445 KRTAP5-2Q701N4 177 aa6.89□□□□□ -1.31
NCAPD3-209ENST00000532445 KRTAP9-6A8MVA2 160 aa6.83□□□□□ -1.32
NCAPD3-209ENST00000532445 KRTAP4-11Q9BYQ6 195 aa6.83□□□□□ -1.32
NCAPD3-209ENST00000532445 KRTAP9-4Q9BYQ2 154 aa6.79□□□□□ -1.32
NCAPD3-209ENST00000532445 KRTAP6-2Q3LI66 62 aa6.68□□□□□ -1.34
NCAPD3-209ENST00000532445 PMAIP1Q13794 54 aa6.64□□□□□ -1.35
NCAPD3-209ENST00000532445 KRTAP5-8O75690 187 aa6.59□□□□□ -1.35
NCAPD3-209ENST00000532445 MT3P25713 68 aa6.45□□□□□ -1.38
NCAPD3-209ENST00000532445 OBSCNQ5VST9 7968 aa6.42□□□□□ -1.38
NCAPD3-209ENST00000532445 PRO0628Q9UI54 55 aa6.33□□□□□ -1.4
NCAPD3-209ENST00000532445 PRAC1Q96KF2 57 aa6.32□□□□□ -1.4
NCAPD3-209ENST00000532445 KRTAP9-9Q9BYP9 154 aa6.32□□□□□ -1.4
NCAPD3-209ENST00000532445 MUC5ACP98088 5654 aa6.24□□□□□ -1.41
NCAPD3-209ENST00000532445 KRTAP5-1Q6L8H4 278 aa6.18□□□□□ -1.42
NCAPD3-209ENST00000532445 MUC5BQ9HC84 5762 aaPredicted RBP6.16□□□□□ -1.42
NCAPD3-209ENST00000532445 AHNAKQ09666 5890 aaKnown RBP6.15□□□□□ -1.43
NCAPD3-209ENST00000532445 KTN1-AS1Q86SY8 53 aa6.01□□□□□ -1.45
NCAPD3-209ENST00000532445 LCE1EQ5T753 118 aa5.92□□□□□ -1.46
NCAPD3-209ENST00000532445 SVIPQ8NHG7 77 aa5.7□□□□□ -1.5
NCAPD3-209ENST00000532445 LCE1BQ5T7P3 118 aa5.61□□□□□ -1.51
NCAPD3-209ENST00000532445 KRTAP4-2Q9BYR5 136 aa5.58□□□□□ -1.52
NCAPD3-209ENST00000532445 LCE1CQ5T751 118 aa5.49□□□□□ -1.53
NCAPD3-209ENST00000532445 LUZP6Q538Z0 58 aa5.34□□□□□ -1.55
NCAPD3-209ENST00000532445 LCE3DQ9BYE3 92 aa5.26□□□□□ -1.57
NCAPD3-209ENST00000532445 KRTAP4-12Q9BQ66 201 aa5.09□□□□□ -1.59
NCAPD3-209ENST00000532445 LCE3EQ5T5B0 92 aa4.99□□□□□ -1.61
NCAPD3-209ENST00000532445 KRTAP5-11Q6L8G4 156 aa4.99□□□□□ -1.61
NCAPD3-209ENST00000532445 KRTAP5-6Q6L8G9 129 aaPredicted RBP4.98□□□□□ -1.61
NCAPD3-209ENST00000532445 LCE1FQ5T754 118 aa4.89□□□□□ -1.63
NCAPD3-209ENST00000532445 KRTAP21-2Q3LI59 83 aa4.57□□□□□ -1.68
NCAPD3-209ENST00000532445 PHGR1C9JFL3 82 aa4.44□□□□□ -1.7
NCAPD3-209ENST00000532445 NDUFAF8A1L188 74 aa4.43□□□□□ -1.7
NCAPD3-209ENST00000532445 KRTAP4-4Q9BYR3 166 aa4.21□□□□□ -1.74
NCAPD3-209ENST00000532445 MUC19Q7Z5P9 8384 aa3.94□□□□□ -1.78
NCAPD3-209ENST00000532445 PRM1P04553 51 aa3.85□□□□□ -1.79
NCAPD3-209ENST00000532445 INE1O15225 51 aa3.63□□□□□ -1.83
NCAPD3-209ENST00000532445 A0A0A0MQY5 61 aa3.6□□□□□ -1.83
NCAPD3-209ENST00000532445 KRTAP21-1Q3LI58 79 aa3.37□□□□□ -1.87
NCAPD3-209ENST00000532445 H3BS24 57 aa3.29□□□□□ -1.88
NCAPD3-209ENST00000532445 MUC16Q8WXI7 14507 aa2.86□□□□□ -1.95
Retrieved 78 of 20,778 RNA–protein pairs in 92.5 ms