RNA–Protein interactions for RNA: ENST00000532276.1

TTC9C-204, Transcript of tetratricopeptide repeat domain 9C, humanhuman

TSL 2

Gene TTC9C, Length 627 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TTC9C-204ENST00000532276 SPATA8Q6RVD6 105 aa1.93□□□□□ -2.1
TTC9C-204ENST00000532276 R4GN34 69 aa1.93□□□□□ -2.1
TTC9C-204ENST00000532276 KRTAP19-8Q3LI54 63 aa1.92□□□□□ -2.1
TTC9C-204ENST00000532276 UQCR11O14957 56 aa1.91□□□□□ -2.1
TTC9C-204ENST00000532276 MT1BP07438 61 aa1.91□□□□□ -2.1
TTC9C-204ENST00000532276 A6NED7 52 aa1.89□□□□□ -2.11
TTC9C-204ENST00000532276 MIR22HGQ0VDD5 57 aa1.89□□□□□ -2.11
TTC9C-204ENST00000532276 LINC01554Q52M75 96 aa1.89□□□□□ -2.11
TTC9C-204ENST00000532276 CRCT1Q9UGL9 99 aa1.89□□□□□ -2.11
TTC9C-204ENST00000532276 USH2AO75445 5202 aa1.89□□□□□ -2.11
TTC9C-204ENST00000532276 A0A0D9SG42 100 aa1.88□□□□□ -2.11
TTC9C-204ENST00000532276 A6NN06 94 aa1.88□□□□□ -2.11
TTC9C-204ENST00000532276 KRTAP12-1P59990 96 aa1.88□□□□□ -2.11
TTC9C-204ENST00000532276 PRO0628Q9UI54 55 aa1.88□□□□□ -2.11
TTC9C-204ENST00000532276 CDC42SE1Q9NRR8 79 aa1.86□□□□□ -2.11
TTC9C-204ENST00000532276 SSPOA2VEC9 5147 aa1.85□□□□□ -2.11
TTC9C-204ENST00000532276 SPINT4Q6UDR6 99 aa1.83□□□□□ -2.12
TTC9C-204ENST00000532276 BRK1Q8WUW1 75 aa1.83□□□□□ -2.12
TTC9C-204ENST00000532276 PLAC4Q8WY50 150 aa1.83□□□□□ -2.12
TTC9C-204ENST00000532276 MT1XP80297 61 aa1.82□□□□□ -2.12
TTC9C-204ENST00000532276 KRTAP19-6Q3LI70 58 aa1.82□□□□□ -2.12
TTC9C-204ENST00000532276 PMAIP1Q13794 54 aa1.81□□□□□ -2.12
TTC9C-204ENST00000532276 CAMK2N1Q7Z7J9 78 aa1.79□□□□□ -2.12
TTC9C-204ENST00000532276 K7ERS5 55 aa1.78□□□□□ -2.12
TTC9C-204ENST00000532276 C10orf95Q9H7T3 257 aa1.78□□□□□ -2.12
TTC9C-204ENST00000532276 PRO2289Q9P1D8 64 aa1.76□□□□□ -2.13
TTC9C-204ENST00000532276 FCGBPQ9Y6R7 5405 aaPredicted RBP1.76□□□□□ -2.13
TTC9C-204ENST00000532276 ROMO1P60602 79 aa1.73□□□□□ -2.13
TTC9C-204ENST00000532276 FSIP2Q5CZC0 6907 aa1.73□□□□□ -2.13
TTC9C-204ENST00000532276 TNP1P09430 55 aa1.7□□□□□ -2.14
TTC9C-204ENST00000532276 KRTAP25-1Q3LHN0 102 aa1.7□□□□□ -2.14
TTC9C-204ENST00000532276 KTN1-AS1Q86SY8 53 aa1.7□□□□□ -2.14
TTC9C-204ENST00000532276 KMT2DO14686 5537 aa1.69□□□□□ -2.14
TTC9C-204ENST00000532276 KRTAP8-1Q8IUC2 63 aa1.64□□□□□ -2.15
TTC9C-204ENST00000532276 KRTAP19-7Q3SYF9 63 aa1.63□□□□□ -2.15
TTC9C-204ENST00000532276 MACF1Q9UPN3 7388 aaKnown RBP1.63□□□□□ -2.15
TTC9C-204ENST00000532276 KRTAP19-5Q3LI72 72 aa1.62□□□□□ -2.15
TTC9C-204ENST00000532276 LUZP6Q538Z0 58 aa1.62□□□□□ -2.15
TTC9C-204ENST00000532276 KRTAP6-3Q3LI67 103 aa1.61□□□□□ -2.15
TTC9C-204ENST00000532276 MT1EP04732 61 aa1.6□□□□□ -2.15
TTC9C-204ENST00000532276 KRTAP12-3P60328 96 aa1.59□□□□□ -2.15
TTC9C-204ENST00000532276 SPRR2FQ96RM1 72 aa1.59□□□□□ -2.15
TTC9C-204ENST00000532276 MUC12Q9UKN1 5478 aa1.57□□□□□ -2.16
TTC9C-204ENST00000532276 MT1LQ93083 61 aa1.56□□□□□ -2.16
TTC9C-204ENST00000532276 SYNE2Q8WXH0 6885 aaKnown RBP1.54□□□□□ -2.16
TTC9C-204ENST00000532276 KRTAP19-3Q7Z4W3 81 aa1.54□□□□□ -2.16
TTC9C-204ENST00000532276 MDN1Q9NU22 5596 aa1.53□□□□□ -2.16
TTC9C-204ENST00000532276 SPRR2EP22531 72 aa1.53□□□□□ -2.16
TTC9C-204ENST00000532276 SPRR2BP35325 72 aa1.53□□□□□ -2.16
TTC9C-204ENST00000532276 SPRR2AP35326 72 aa1.53□□□□□ -2.16
TTC9C-204ENST00000532276 SPRR5A0A1B0GTR4 108 aa1.52□□□□□ -2.17
TTC9C-204ENST00000532276 MT1GP13640 62 aa1.51□□□□□ -2.17
TTC9C-204ENST00000532276 MT1MQ8N339 61 aa1.51□□□□□ -2.17
TTC9C-204ENST00000532276 SPRR2DP22532 72 aa1.47□□□□□ -2.17
TTC9C-204ENST00000532276 NEBP20929 6669 aa1.43□□□□□ -2.18
TTC9C-204ENST00000532276 KRTAP2-3P0C7H8 128 aa1.41□□□□□ -2.18
TTC9C-204ENST00000532276 KRTAP12-4P60329 112 aa1.41□□□□□ -2.18
TTC9C-204ENST00000532276 KRTAP2-4Q9BYR9 128 aa1.41□□□□□ -2.18
TTC9C-204ENST00000532276 KRTAP20-1Q3LI63 56 aa1.4□□□□□ -2.19
TTC9C-204ENST00000532276 DSTQ03001 7570 aaKnown RBP1.37□□□□□ -2.19
TTC9C-204ENST00000532276 KRTAP2-1Q9BYU5 128 aa1.37□□□□□ -2.19
TTC9C-204ENST00000532276 MT1AP04731 61 aa1.32□□□□□ -2.2
TTC9C-204ENST00000532276 KRTAP6-1Q3LI64 71 aa1.32□□□□□ -2.2
TTC9C-204ENST00000532276 MT4P47944 62 aa1.28□□□□□ -2.2
TTC9C-204ENST00000532276 SYNE1Q8NF91 8797 aaKnown RBP1.27□□□□□ -2.21
TTC9C-204ENST00000532276 KRTAP20-2Q3LI61 65 aa1.25□□□□□ -2.21
TTC9C-204ENST00000532276 INE1O15225 51 aa1.21□□□□□ -2.22
TTC9C-204ENST00000532276 KRTAP6-2Q3LI66 62 aa1.21□□□□□ -2.22
TTC9C-204ENST00000532276 AHNAK2Q8IVF2 5795 aa1.14□□□□□ -2.23
TTC9C-204ENST00000532276 KRTAP5-10Q6L8G5 202 aa1.11□□□□□ -2.23
TTC9C-204ENST00000532276 MUC5ACP98088 5654 aa1.02□□□□□ -2.25
TTC9C-204ENST00000532276 GPR98Q8WXG9 6306 aa0.98□□□□□ -2.25
TTC9C-204ENST00000532276 MUC16Q8WXI7 14507 aa0.94□□□□□ -2.26
TTC9C-204ENST00000532276 MUC5BQ9HC84 5762 aaPredicted RBP0.92□□□□□ -2.26
TTC9C-204ENST00000532276 PRM1P04553 51 aa0.91□□□□□ -2.26
TTC9C-204ENST00000532276 AHNAKQ09666 5890 aaKnown RBP0.85□□□□□ -2.27
TTC9C-204ENST00000532276 PHGR1C9JFL3 82 aa0.75□□□□□ -2.29
TTC9C-204ENST00000532276 KRTAP21-1Q3LI58 79 aa0.55□□□□□ -2.32
Retrieved 78 of 20,778 RNA–protein pairs in 38.8 ms