RNA–Protein interactions for RNA: ENST00000532276.1

TTC9C-204, Transcript of tetratricopeptide repeat domain 9C, humanhuman

TSL 2

Gene TTC9C, Length 627 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TTC9C-204ENST00000532276 AEBP2Q6ZN18 517 aaPredicted RBP29.05■■■□□ 2.24
TTC9C-204ENST00000532276 CHIC1Q5VXU3 224 aa27.08■■□□□ 1.93
TTC9C-204ENST00000532276 SENP3Q9H4L4 574 aaPredicted RBP24.85■■□□□ 1.57
TTC9C-204ENST00000532276 PHF23Q9BUL5 403 aaPredicted RBP24.46■■□□□ 1.51
TTC9C-204ENST00000532276 FOXD1Q16676 465 aa23.29■■□□□ 1.32
TTC9C-204ENST00000532276 POTEDQ86YR6 584 aa22.82■■□□□ 1.24
TTC9C-204ENST00000532276 MSH5O43196 834 aa22.04■■□□□ 1.12
TTC9C-204ENST00000532276 PIAS4Q8N2W9 510 aaPredicted RBP21.53■■□□□ 1.04
TTC9C-204ENST00000532276 PPP6R1Q9UPN7 881 aa21.23■□□□□ 0.99
TTC9C-204ENST00000532276 ADRA2BP18089 450 aa21.09■□□□□ 0.97
TTC9C-204ENST00000532276 PLPPR3Q6T4P5 718 aa21.09■□□□□ 0.97
TTC9C-204ENST00000532276 MAPK8IP2Q13387 824 aaPredicted RBP19.61■□□□□ 0.73
TTC9C-204ENST00000532276 DMRT2Q9Y5R5 561 aa19.61■□□□□ 0.73
TTC9C-204ENST00000532276 CACNB1Q02641 598 aaPredicted RBP19.37■□□□□ 0.69
TTC9C-204ENST00000532276 SCAF1Q9H7N4 1312 aaKnown RBP19.26■□□□□ 0.67
TTC9C-204ENST00000532276 DCAF8L1A6NGE4 600 aa18.78■□□□□ 0.6
TTC9C-204ENST00000532276 RNF39Q9H2S5 420 aa18.77■□□□□ 0.6
TTC9C-204ENST00000532276 HOXD11P31277 338 aaPredicted RBP18.62■□□□□ 0.57
TTC9C-204ENST00000532276 C1QBPQ07021 282 aaKnown RBP18.44■□□□□ 0.54
TTC9C-204ENST00000532276 PPP4R3CPQ6ZMV5 832 aa18.4■□□□□ 0.54
TTC9C-204ENST00000532276 RNF216Q9NWF9 866 aaPredicted RBP18.26■□□□□ 0.51
TTC9C-204ENST00000532276 CNKSR2Q8WXI2 1034 aa18.23■□□□□ 0.51
TTC9C-204ENST00000532276 DNAJC5BQ9UF47 199 aa18.14■□□□□ 0.49
TTC9C-204ENST00000532276 POTEHQ6S545 545 aa17.72■□□□□ 0.43
TTC9C-204ENST00000532276 GRWD1Q9BQ67 446 aaKnown RBP eCLIP17.68■□□□□ 0.42
TTC9C-204ENST00000532276 NCBP3Q53F19 620 aaKnown RBP17.44■□□□□ 0.38
TTC9C-204ENST00000532276 DSG3P32926 999 aa17.33■□□□□ 0.36
TTC9C-204ENST00000532276 U3KPZ7 1027 aaPredicted RBP17.26■□□□□ 0.35
TTC9C-204ENST00000532276 SPINK5Q9NQ38 1064 aaPredicted RBP17.23■□□□□ 0.35
TTC9C-204ENST00000532276 NPM3O75607 178 aaKnown RBP17.22■□□□□ 0.35
TTC9C-204ENST00000532276 CAPN15O75808 1086 aa17.2■□□□□ 0.34
TTC9C-204ENST00000532276 TRHP20396 242 aaPredicted RBP16.75■□□□□ 0.27
TTC9C-204ENST00000532276 ABCB7O75027 752 aa16.74■□□□□ 0.27
TTC9C-204ENST00000532276 ZNF219Q9P2Y4 722 aaPredicted RBP16.69■□□□□ 0.26
TTC9C-204ENST00000532276 SLC4A2P04920 1241 aa16.67■□□□□ 0.26
TTC9C-204ENST00000532276 APLP2Q06481 763 aa16.64■□□□□ 0.25
TTC9C-204ENST00000532276 RBM42Q9BTD8 480 aaKnown RBP16.5■□□□□ 0.23
TTC9C-204ENST00000532276 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP16.47■□□□□ 0.23
TTC9C-204ENST00000532276 HNRNPUL2Q1KMD3 747 aaKnown RBP16.47■□□□□ 0.23
TTC9C-204ENST00000532276 CHRDL2Q6WN34 429 aa16.46■□□□□ 0.23
TTC9C-204ENST00000532276 SAMD1Q6SPF0 538 aaPredicted RBP16.35■□□□□ 0.21
TTC9C-204ENST00000532276 SP7Q8TDD2 431 aaPredicted RBP16.25■□□□□ 0.19
TTC9C-204ENST00000532276 KCNA4P22459 653 aa16.22■□□□□ 0.19
TTC9C-204ENST00000532276 POLA2Q14181 598 aa16.16■□□□□ 0.18
TTC9C-204ENST00000532276 AKT1S1Q96B36 256 aa16■□□□□ 0.15
TTC9C-204ENST00000532276 PIP4P2Q8N4L2 257 aa15.93■□□□□ 0.14
TTC9C-204ENST00000532276 MYCNP04198 464 aaPredicted RBP15.91■□□□□ 0.14
TTC9C-204ENST00000532276 REM2Q8IYK8 340 aaPredicted RBP15.86■□□□□ 0.13
TTC9C-204ENST00000532276 HAX1O00165 279 aa15.82■□□□□ 0.12
TTC9C-204ENST00000532276 FXR2P51116 673 aaKnown RBP eCLIP15.73■□□□□ 0.11
TTC9C-204ENST00000532276 ZBTB12Q9Y330 459 aaPredicted RBP15.73■□□□□ 0.11
TTC9C-204ENST00000532276 PITPNM1O00562 1244 aa15.69■□□□□ 0.1
TTC9C-204ENST00000532276 ATF5Q9Y2D1 282 aaPredicted RBP15.66■□□□□ 0.1
TTC9C-204ENST00000532276 OSCARQ8IYS5 282 aa15.64■□□□□ 0.09
TTC9C-204ENST00000532276 EVX2Q03828 476 aa15.62■□□□□ 0.09
TTC9C-204ENST00000532276 FOXD4L1Q9NU39 408 aa15.35■□□□□ 0.05
TTC9C-204ENST00000532276 PRKAR2AP13861 404 aaKnown RBP15.26■□□□□ 0.03
TTC9C-204ENST00000532276 C19orf67A6NJJ6 358 aa15.25■□□□□ 0.03
TTC9C-204ENST00000532276 LHX8Q68G74 356 aa15.24■□□□□ 0.03
TTC9C-204ENST00000532276 SPDYE2BA6NHP3 402 aa15.22■□□□□ 0.03
TTC9C-204ENST00000532276 SPDYE6P0CI01 402 aa15.22■□□□□ 0.03
TTC9C-204ENST00000532276 SPDYE2Q495Y8 402 aa15.22■□□□□ 0.03
TTC9C-204ENST00000532276 GABBR2O75899 941 aa15.21■□□□□ 0.03
TTC9C-204ENST00000532276 SLC4A1APQ9BWU0 796 aaKnown RBP15.14■□□□□ 0.01
TTC9C-204ENST00000532276 SPDYE1Q8NFV5 336 aaPredicted RBP15.12■□□□□ 0.01
TTC9C-204ENST00000532276 CLEC11AQ9Y240 323 aa15.12■□□□□ 0.01
TTC9C-204ENST00000532276 FBLN2P98095 1184 aa15.03■□□□□ -0
TTC9C-204ENST00000532276 ATXN8OSP0DMR3 200 aa14.97□□□□□ -0.01
TTC9C-204ENST00000532276 CHADLQ6NUI6 762 aa14.94□□□□□ -0.02
TTC9C-204ENST00000532276 SSUH2Q9Y2M2 353 aa14.94□□□□□ -0.02
TTC9C-204ENST00000532276 ZBTB22O15209 634 aa14.92□□□□□ -0.02
TTC9C-204ENST00000532276 ZNF692Q9BU19 519 aaPredicted RBP14.91□□□□□ -0.02
TTC9C-204ENST00000532276 POTEIP0CG38 1075 aa14.9□□□□□ -0.02
TTC9C-204ENST00000532276 MKRN4PQ13434 485 aaPredicted RBP14.89□□□□□ -0.03
TTC9C-204ENST00000532276 PLSCR2Q9NRY7 297 aa14.84□□□□□ -0.03
TTC9C-204ENST00000532276 PRR29P0C7W0 189 aa14.78□□□□□ -0.04
TTC9C-204ENST00000532276 CD44P16070 742 aaKnown RBP14.73□□□□□ -0.05
TTC9C-204ENST00000532276 CLCN6P51797 869 aa14.7□□□□□ -0.06
TTC9C-204ENST00000532276 PABPN1Q86U42 306 aaKnown RBP eCLIP14.66□□□□□ -0.06
TTC9C-204ENST00000532276 FARP1Q9Y4F1 1045 aaPredicted RBP14.65□□□□□ -0.06
TTC9C-204ENST00000532276 DCBLD2Q96PD2 775 aa14.59□□□□□ -0.07
TTC9C-204ENST00000532276 ZNF579Q8NAF0 562 aaKnown RBP14.48□□□□□ -0.09
TTC9C-204ENST00000532276 OTUD5Q96G74 571 aa14.48□□□□□ -0.09
TTC9C-204ENST00000532276 ZRANB1Q9UGI0 708 aa14.41□□□□□ -0.1
TTC9C-204ENST00000532276 POTEB2H3BUK9 544 aa14.4□□□□□ -0.1
TTC9C-204ENST00000532276 POTEMA6NI47 508 aa14.38□□□□□ -0.11
TTC9C-204ENST00000532276 GALR2O43603 387 aaPredicted RBP14.36□□□□□ -0.11
TTC9C-204ENST00000532276 POTEGQ6S5H5 508 aa14.31□□□□□ -0.12
TTC9C-204ENST00000532276 CREBZFQ9NS37 354 aa14.27□□□□□ -0.13
TTC9C-204ENST00000532276 PCDH10Q9P2E7 1040 aa14.2□□□□□ -0.14
TTC9C-204ENST00000532276 PELP1Q8IZL8 1130 aaKnown RBP14.18□□□□□ -0.14
TTC9C-204ENST00000532276 PHF12Q96QT6 1004 aa14.14□□□□□ -0.15
TTC9C-204ENST00000532276 STAG3Q9UJ98 1225 aa14.11□□□□□ -0.15
TTC9C-204ENST00000532276 PAK3O75914 559 aaPredicted RBP14.09□□□□□ -0.15
TTC9C-204ENST00000532276 POTEJP0CG39 1038 aa14.07□□□□□ -0.16
TTC9C-204ENST00000532276 ASTLQ6HA08 431 aaPredicted RBP14.03□□□□□ -0.16
TTC9C-204ENST00000532276 METRNQ9UJH8 293 aa14.03□□□□□ -0.16
TTC9C-204ENST00000532276 LCE2DQ5TA82 110 aaPredicted RBP14.01□□□□□ -0.17
TTC9C-204ENST00000532276 C7P10643 843 aa13.99□□□□□ -0.17
TTC9C-204ENST00000532276 SLC39A7Q92504 469 aa13.99□□□□□ -0.17
Retrieved 100 of 20,778 RNA–protein pairs in 66.4 ms