RNA–Protein interactions for RNA: ENST00000531900.1

GPATCH4-216, Transcript of G-patch domain containing 4, humanhuman

TSL 2

Gene GPATCH4, Length 653 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GPATCH4-216ENST00000531900 Q1T7F1 81 aa3.99□□□□□ -1.77
GPATCH4-216ENST00000531900 LCE5AQ5TCM9 118 aa3.99□□□□□ -1.77
GPATCH4-216ENST00000531900 KRTAP19-3Q7Z4W3 81 aa3.97□□□□□ -1.77
GPATCH4-216ENST00000531900 KRTAP19-5Q3LI72 72 aa3.96□□□□□ -1.78
GPATCH4-216ENST00000531900 MIR22HGQ0VDD5 57 aa3.95□□□□□ -1.78
GPATCH4-216ENST00000531900 MT1GP13640 62 aa3.91□□□□□ -1.78
GPATCH4-216ENST00000531900 LCE3AQ5TA76 89 aa3.91□□□□□ -1.78
GPATCH4-216ENST00000531900 DSTQ03001 7570 aaKnown RBP3.9□□□□□ -1.78
GPATCH4-216ENST00000531900 PSPHP1O15172 72 aa3.9□□□□□ -1.79
GPATCH4-216ENST00000531900 LCE4AQ5TA78 99 aa3.9□□□□□ -1.79
GPATCH4-216ENST00000531900 KRTAP4-12Q9BQ66 201 aa3.9□□□□□ -1.79
GPATCH4-216ENST00000531900 K7ERS5 55 aa3.85□□□□□ -1.79
GPATCH4-216ENST00000531900 PP632Q6XCG6 107 aa3.85□□□□□ -1.79
GPATCH4-216ENST00000531900 MT1LQ93083 61 aa3.85□□□□□ -1.79
GPATCH4-216ENST00000531900 KRTAP25-1Q3LHN0 102 aa3.84□□□□□ -1.79
GPATCH4-216ENST00000531900 KRTAP15-1Q3LI76 137 aa3.84□□□□□ -1.79
GPATCH4-216ENST00000531900 MT1MQ8N339 61 aa3.82□□□□□ -1.8
GPATCH4-216ENST00000531900 KRTAP4-9Q9BYQ8 210 aa3.82□□□□□ -1.8
GPATCH4-216ENST00000531900 KRTAP12-3P60328 96 aa3.79□□□□□ -1.8
GPATCH4-216ENST00000531900 A6NED7 52 aa3.78□□□□□ -1.8
GPATCH4-216ENST00000531900 KRTAP9-4Q9BYQ2 154 aa3.77□□□□□ -1.81
GPATCH4-216ENST00000531900 KRTAP9-9Q9BYP9 154 aa3.74□□□□□ -1.81
GPATCH4-216ENST00000531900 LCE1DQ5T752 114 aa3.73□□□□□ -1.81
GPATCH4-216ENST00000531900 GPR98Q8WXG9 6306 aa3.7□□□□□ -1.82
GPATCH4-216ENST00000531900 MT4P47944 62 aa3.69□□□□□ -1.82
GPATCH4-216ENST00000531900 CDC42SE1Q9NRR8 79 aa3.69□□□□□ -1.82
GPATCH4-216ENST00000531900 KRTAP4-3Q9BYR4 195 aa3.67□□□□□ -1.82
GPATCH4-216ENST00000531900 ROMO1P60602 79 aa3.63□□□□□ -1.83
GPATCH4-216ENST00000531900 KRTAP5-4Q6L8H1 288 aa3.63□□□□□ -1.83
GPATCH4-216ENST00000531900 KRTAP4-7Q9BYR0 210 aa3.63□□□□□ -1.83
GPATCH4-216ENST00000531900 HMCN1Q96RW7 5635 aa3.63□□□□□ -1.83
GPATCH4-216ENST00000531900 BRK1Q8WUW1 75 aa3.59□□□□□ -1.83
GPATCH4-216ENST00000531900 KRTAP5-5Q701N2 237 aaPredicted RBP3.54□□□□□ -1.84
GPATCH4-216ENST00000531900 LCE3CQ5T5A8 94 aa3.51□□□□□ -1.85
GPATCH4-216ENST00000531900 AHNAK2Q8IVF2 5795 aa3.5□□□□□ -1.85
GPATCH4-216ENST00000531900 KRTAP5-10Q6L8G5 202 aa3.49□□□□□ -1.85
GPATCH4-216ENST00000531900 PRAC1Q96KF2 57 aa3.49□□□□□ -1.85
GPATCH4-216ENST00000531900 PRO0628Q9UI54 55 aa3.48□□□□□ -1.85
GPATCH4-216ENST00000531900 SPRR5A0A1B0GTR4 108 aa3.42□□□□□ -1.86
GPATCH4-216ENST00000531900 KRTAP12-4P60329 112 aa3.42□□□□□ -1.86
GPATCH4-216ENST00000531900 KRTAP20-2Q3LI61 65 aa3.42□□□□□ -1.86
GPATCH4-216ENST00000531900 SYNE1Q8NF91 8797 aaKnown RBP3.42□□□□□ -1.86
GPATCH4-216ENST00000531900 KRTAP5-3Q6L8H2 238 aa3.41□□□□□ -1.86
GPATCH4-216ENST00000531900 PMAIP1Q13794 54 aa3.4□□□□□ -1.87
GPATCH4-216ENST00000531900 KRTAP5-7Q6L8G8 165 aa3.39□□□□□ -1.87
GPATCH4-216ENST00000531900 KRTAP9-6A8MVA2 160 aa3.31□□□□□ -1.88
GPATCH4-216ENST00000531900 KRTAP4-11Q9BYQ6 195 aa3.3□□□□□ -1.88
GPATCH4-216ENST00000531900 MT1AP04731 61 aa3.29□□□□□ -1.88
GPATCH4-216ENST00000531900 KRTAP6-1Q3LI64 71 aa3.25□□□□□ -1.89
GPATCH4-216ENST00000531900 KTN1-AS1Q86SY8 53 aa3.22□□□□□ -1.89
GPATCH4-216ENST00000531900 KRTAP5-2Q701N4 177 aa3.2□□□□□ -1.9
GPATCH4-216ENST00000531900 KRTAP4-2Q9BYR5 136 aa3.17□□□□□ -1.9
GPATCH4-216ENST00000531900 NDUFAF8A1L188 74 aa3.15□□□□□ -1.91
GPATCH4-216ENST00000531900 KRTAP6-2Q3LI66 62 aa3.07□□□□□ -1.92
GPATCH4-216ENST00000531900 KRTAP5-8O75690 187 aa3.03□□□□□ -1.92
GPATCH4-216ENST00000531900 MT3P25713 68 aa3.01□□□□□ -1.93
GPATCH4-216ENST00000531900 OBSCNQ5VST9 7968 aa2.97□□□□□ -1.93
GPATCH4-216ENST00000531900 MUC5BQ9HC84 5762 aaPredicted RBP2.9□□□□□ -1.95
GPATCH4-216ENST00000531900 MUC5ACP98088 5654 aa2.88□□□□□ -1.95
GPATCH4-216ENST00000531900 AHNAKQ09666 5890 aaKnown RBP2.86□□□□□ -1.95
GPATCH4-216ENST00000531900 LCE1FQ5T754 118 aa2.84□□□□□ -1.95
GPATCH4-216ENST00000531900 KRTAP5-1Q6L8H4 278 aa2.84□□□□□ -1.95
GPATCH4-216ENST00000531900 LCE1EQ5T753 118 aa2.79□□□□□ -1.96
GPATCH4-216ENST00000531900 LUZP6Q538Z0 58 aa2.69□□□□□ -1.98
GPATCH4-216ENST00000531900 LCE1CQ5T751 118 aa2.58□□□□□ -2
GPATCH4-216ENST00000531900 LCE1BQ5T7P3 118 aa2.58□□□□□ -2
GPATCH4-216ENST00000531900 LCE3DQ9BYE3 92 aa2.55□□□□□ -2
GPATCH4-216ENST00000531900 LCE3EQ5T5B0 92 aa2.43□□□□□ -2.02
GPATCH4-216ENST00000531900 KRTAP5-6Q6L8G9 129 aaPredicted RBP2.39□□□□□ -2.03
GPATCH4-216ENST00000531900 KRTAP5-11Q6L8G4 156 aa2.32□□□□□ -2.04
GPATCH4-216ENST00000531900 INE1O15225 51 aa2.17□□□□□ -2.06
GPATCH4-216ENST00000531900 KRTAP21-2Q3LI59 83 aa2.17□□□□□ -2.06
GPATCH4-216ENST00000531900 PHGR1C9JFL3 82 aa2.06□□□□□ -2.08
GPATCH4-216ENST00000531900 KRTAP4-4Q9BYR3 166 aa1.91□□□□□ -2.1
GPATCH4-216ENST00000531900 MUC19Q7Z5P9 8384 aa1.85□□□□□ -2.11
GPATCH4-216ENST00000531900 PRM1P04553 51 aa1.84□□□□□ -2.11
GPATCH4-216ENST00000531900 KRTAP21-1Q3LI58 79 aa1.58□□□□□ -2.16
GPATCH4-216ENST00000531900 MUC16Q8WXI7 14507 aa1.27□□□□□ -2.21
Retrieved 78 of 20,778 RNA–protein pairs in 43.9 ms