RNA–Protein interactions for RNA: ENST00000531733.1

FDFT1-220, Transcript of farnesyl-diphosphate farnesyltransferase 1, humanhuman

TSL 2

Gene FDFT1, Length 712 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FDFT1-220ENST00000531733 LCE3AQ5TA76 89 aa7.21□□□□□ -1.26
FDFT1-220ENST00000531733 SERP1Q9Y6X1 66 aa7.2□□□□□ -1.26
FDFT1-220ENST00000531733 A0A1B0GU33 70 aa7.18□□□□□ -1.26
FDFT1-220ENST00000531733 SEC61GP60059 68 aa7.18□□□□□ -1.26
FDFT1-220ENST00000531733 KRTAP5-7Q6L8G8 165 aa7.18□□□□□ -1.26
FDFT1-220ENST00000531733 KRTAP5-3Q6L8H2 238 aa7.16□□□□□ -1.26
FDFT1-220ENST00000531733 KRTAP4-7Q9BYR0 210 aa7.14□□□□□ -1.27
FDFT1-220ENST00000531733 KRTAP20-2Q3LI61 65 aa7.04□□□□□ -1.28
FDFT1-220ENST00000531733 A8MU10 97 aa7.03□□□□□ -1.28
FDFT1-220ENST00000531733 RPS28P62857 69 aaKnown RBP7.01□□□□□ -1.29
FDFT1-220ENST00000531733 TNP1P09430 55 aa6.99□□□□□ -1.29
FDFT1-220ENST00000531733 KRTAP5-5Q701N2 237 aaPredicted RBP6.95□□□□□ -1.3
FDFT1-220ENST00000531733 SMIM26A0A096LP01 95 aa6.93□□□□□ -1.3
FDFT1-220ENST00000531733 SPRR5A0A1B0GTR4 108 aa6.89□□□□□ -1.31
FDFT1-220ENST00000531733 KRTAP12-3P60328 96 aa6.88□□□□□ -1.31
FDFT1-220ENST00000531733 LINC01558Q9Y6Z2 57 aa6.84□□□□□ -1.31
FDFT1-220ENST00000531733 A0A1B0GU69 56 aa6.83□□□□□ -1.32
FDFT1-220ENST00000531733 Q1T7F1 81 aa6.82□□□□□ -1.32
FDFT1-220ENST00000531733 SYNE1Q8NF91 8797 aaKnown RBP6.79□□□□□ -1.32
FDFT1-220ENST00000531733 LOC100996750A0A140TA64 210 aa6.79□□□□□ -1.32
FDFT1-220ENST00000531733 KRTAP12-4P60329 112 aa6.78□□□□□ -1.32
FDFT1-220ENST00000531733 V9GYY9 64 aa6.74□□□□□ -1.33
FDFT1-220ENST00000531733 PRR15LQ9BU68 103 aa6.73□□□□□ -1.33
FDFT1-220ENST00000531733 PSPHP1O15172 72 aa6.69□□□□□ -1.34
FDFT1-220ENST00000531733 KRTAP4-11Q9BYQ6 195 aa6.52□□□□□ -1.37
FDFT1-220ENST00000531733 UQCR11O14957 56 aa6.49□□□□□ -1.37
FDFT1-220ENST00000531733 A6NED7 52 aa6.45□□□□□ -1.38
FDFT1-220ENST00000531733 KRTAP5-2Q701N4 177 aa6.43□□□□□ -1.38
FDFT1-220ENST00000531733 MIR22HGQ0VDD5 57 aa6.42□□□□□ -1.38
FDFT1-220ENST00000531733 KRTAP25-1Q3LHN0 102 aa6.37□□□□□ -1.39
FDFT1-220ENST00000531733 CDC42SE1Q9NRR8 79 aa6.36□□□□□ -1.39
FDFT1-220ENST00000531733 KRTAP6-1Q3LI64 71 aa6.35□□□□□ -1.39
FDFT1-220ENST00000531733 AHNAKQ09666 5890 aaKnown RBP6.34□□□□□ -1.39
FDFT1-220ENST00000531733 KRTAP5-8O75690 187 aa6.33□□□□□ -1.4
FDFT1-220ENST00000531733 KRTAP19-4Q3LI73 84 aa6.32□□□□□ -1.4
FDFT1-220ENST00000531733 MUC5BQ9HC84 5762 aaPredicted RBP6.32□□□□□ -1.4
FDFT1-220ENST00000531733 MT1AP04731 61 aa6.3□□□□□ -1.4
FDFT1-220ENST00000531733 LCE3CQ5T5A8 94 aa6.3□□□□□ -1.4
FDFT1-220ENST00000531733 MUC5ACP98088 5654 aa6.29□□□□□ -1.4
FDFT1-220ENST00000531733 KRTAP15-1Q3LI76 137 aa6.28□□□□□ -1.4
FDFT1-220ENST00000531733 BRK1Q8WUW1 75 aa6.28□□□□□ -1.4
FDFT1-220ENST00000531733 OBSCNQ5VST9 7968 aa6.19□□□□□ -1.42
FDFT1-220ENST00000531733 KRTAP9-4Q9BYQ2 154 aa6.15□□□□□ -1.42
FDFT1-220ENST00000531733 KRTAP6-2Q3LI66 62 aa6.13□□□□□ -1.43
FDFT1-220ENST00000531733 KRTAP23-1A1A580 65 aa6.08□□□□□ -1.44
FDFT1-220ENST00000531733 K7ERS5 55 aa6.07□□□□□ -1.44
FDFT1-220ENST00000531733 PRO0628Q9UI54 55 aa6.07□□□□□ -1.44
FDFT1-220ENST00000531733 KRTAP9-6A8MVA2 160 aa6.06□□□□□ -1.44
FDFT1-220ENST00000531733 KRTAP9-9Q9BYP9 154 aa6.01□□□□□ -1.45
FDFT1-220ENST00000531733 PMAIP1Q13794 54 aa5.9□□□□□ -1.46
FDFT1-220ENST00000531733 ROMO1P60602 79 aa5.89□□□□□ -1.47
FDFT1-220ENST00000531733 KRTAP5-1Q6L8H4 278 aa5.86□□□□□ -1.47
FDFT1-220ENST00000531733 MT3P25713 68 aa5.75□□□□□ -1.49
FDFT1-220ENST00000531733 KTN1-AS1Q86SY8 53 aa5.65□□□□□ -1.5
FDFT1-220ENST00000531733 PRAC1Q96KF2 57 aa5.64□□□□□ -1.51
FDFT1-220ENST00000531733 LCE1EQ5T753 118 aa5.37□□□□□ -1.55
FDFT1-220ENST00000531733 SVIPQ8NHG7 77 aa5.28□□□□□ -1.56
FDFT1-220ENST00000531733 KRTAP4-2Q9BYR5 136 aa5.21□□□□□ -1.58
FDFT1-220ENST00000531733 LCE1BQ5T7P3 118 aa5.16□□□□□ -1.58
FDFT1-220ENST00000531733 LCE1CQ5T751 118 aa5□□□□□ -1.61
FDFT1-220ENST00000531733 KRTAP4-12Q9BQ66 201 aa4.91□□□□□ -1.62
FDFT1-220ENST00000531733 KRTAP5-11Q6L8G4 156 aa4.6□□□□□ -1.67
FDFT1-220ENST00000531733 LCE1FQ5T754 118 aa4.51□□□□□ -1.69
FDFT1-220ENST00000531733 KRTAP5-6Q6L8G9 129 aaPredicted RBP4.5□□□□□ -1.69
FDFT1-220ENST00000531733 LUZP6Q538Z0 58 aa4.47□□□□□ -1.69
FDFT1-220ENST00000531733 LCE3DQ9BYE3 92 aa4.43□□□□□ -1.7
FDFT1-220ENST00000531733 NDUFAF8A1L188 74 aa4.34□□□□□ -1.71
FDFT1-220ENST00000531733 PHGR1C9JFL3 82 aa4.33□□□□□ -1.72
FDFT1-220ENST00000531733 KRTAP21-2Q3LI59 83 aa4.18□□□□□ -1.74
FDFT1-220ENST00000531733 LCE3EQ5T5B0 92 aa4.09□□□□□ -1.75
FDFT1-220ENST00000531733 KRTAP4-4Q9BYR3 166 aa3.95□□□□□ -1.78
FDFT1-220ENST00000531733 MUC19Q7Z5P9 8384 aa3.82□□□□□ -1.8
FDFT1-220ENST00000531733 A0A0A0MQY5 61 aa3.69□□□□□ -1.82
FDFT1-220ENST00000531733 INE1O15225 51 aa3.55□□□□□ -1.84
FDFT1-220ENST00000531733 H3BS24 57 aa3.49□□□□□ -1.85
FDFT1-220ENST00000531733 KRTAP21-1Q3LI58 79 aa3.26□□□□□ -1.89
FDFT1-220ENST00000531733 PRM1P04553 51 aa3.08□□□□□ -1.92
FDFT1-220ENST00000531733 MUC16Q8WXI7 14507 aa2.63□□□□□ -1.99
Retrieved 78 of 20,778 RNA–protein pairs in 95.6 ms