RNA–Protein interactions for RNA: ENST00000531621.5

EEF1D-238, Transcript of eukaryotic translation elongation factor 1 delta, human

TSL 3 BASIC

Gene EEF1D, Length 840 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
EEF1D-238	ENST00000531621	PSPHP1	O15172	72 aa		6.13	□□□□□ -1.43
EEF1D-238	ENST00000531621	MT1M	Q8N339	61 aa		6.12	□□□□□ -1.43
EEF1D-238	ENST00000531621	KRTAP4-9	Q9BYQ8	210 aa		6.1	□□□□□ -1.43
EEF1D-238	ENST00000531621	GPR98	Q8WXG9	6306 aa		6.09	□□□□□ -1.43
EEF1D-238	ENST00000531621		Q1T7F1	81 aa		6.06	□□□□□ -1.44
EEF1D-238	ENST00000531621	KRTAP12-3	P60328	96 aa		6.03	□□□□□ -1.44
EEF1D-238	ENST00000531621	KRTAP25-1	Q3LHN0	102 aa		6.01	□□□□□ -1.45
EEF1D-238	ENST00000531621	KRTAP4-3	Q9BYR4	195 aa		5.99	□□□□□ -1.45
EEF1D-238	ENST00000531621		A6NED7	52 aa		5.94	□□□□□ -1.46
EEF1D-238	ENST00000531621	LCE1D	Q5T752	114 aa		5.94	□□□□□ -1.46
EEF1D-238	ENST00000531621	LCE4A	Q5TA78	99 aa		5.9	□□□□□ -1.46
EEF1D-238	ENST00000531621	KRTAP4-7	Q9BYR0	210 aa		5.89	□□□□□ -1.47
EEF1D-238	ENST00000531621	MT4	P47944	62 aa		5.88	□□□□□ -1.47
EEF1D-238	ENST00000531621	HMCN1	Q96RW7	5635 aa		5.86	□□□□□ -1.47
EEF1D-238	ENST00000531621	RPS28	P62857	69 aa	Known RBP	5.79	□□□□□ -1.48
EEF1D-238	ENST00000531621	KRTAP5-4	Q6L8H1	288 aa		5.79	□□□□□ -1.48
EEF1D-238	ENST00000531621	PCP4	P48539	62 aa		5.78	□□□□□ -1.48
EEF1D-238	ENST00000531621	CDC42SE1	Q9NRR8	79 aa		5.77	□□□□□ -1.49
EEF1D-238	ENST00000531621	KRTAP23-1	A1A580	65 aa		5.76	□□□□□ -1.49
EEF1D-238	ENST00000531621	AHNAK2	Q8IVF2	5795 aa		5.71	□□□□□ -1.5
EEF1D-238	ENST00000531621	KRTAP4-6	Q9BYQ5	205 aa		5.7	□□□□□ -1.5
EEF1D-238	ENST00000531621	KRTAP19-4	Q3LI73	84 aa		5.68	□□□□□ -1.5
EEF1D-238	ENST00000531621	ROMO1	P60602	79 aa		5.67	□□□□□ -1.5
EEF1D-238	ENST00000531621	KRTAP15-1	Q3LI76	137 aa		5.67	□□□□□ -1.5
EEF1D-238	ENST00000531621	LOC100996750	A0A140TA64	210 aa		5.58	□□□□□ -1.52
EEF1D-238	ENST00000531621	LCE3C	Q5T5A8	94 aa		5.56	□□□□□ -1.52
EEF1D-238	ENST00000531621	KRTAP5-10	Q6L8G5	202 aa		5.56	□□□□□ -1.52
EEF1D-238	ENST00000531621	KRTAP5-5	Q701N2	237 aa	Predicted RBP	5.55	□□□□□ -1.52
EEF1D-238	ENST00000531621	KRTAP12-4	P60329	112 aa		5.51	□□□□□ -1.53
EEF1D-238	ENST00000531621	SVIP	Q8NHG7	77 aa		5.48	□□□□□ -1.53
EEF1D-238	ENST00000531621	KRTAP20-2	Q3LI61	65 aa		5.47	□□□□□ -1.53
EEF1D-238	ENST00000531621	SPRR5	A0A1B0GTR4	108 aa		5.43	□□□□□ -1.54
EEF1D-238	ENST00000531621	KRTAP5-3	Q6L8H2	238 aa		5.41	□□□□□ -1.54
EEF1D-238	ENST00000531621	KRTAP5-7	Q6L8G8	165 aa		5.34	□□□□□ -1.55
EEF1D-238	ENST00000531621	SYNE1	Q8NF91	8797 aa	Known RBP	5.34	□□□□□ -1.55
EEF1D-238	ENST00000531621	MT1A	P04731	61 aa		5.23	□□□□□ -1.57
EEF1D-238	ENST00000531621	KRTAP6-1	Q3LI64	71 aa		5.21	□□□□□ -1.58
EEF1D-238	ENST00000531621	KRTAP9-6	A8MVA2	160 aa		5.18	□□□□□ -1.58
EEF1D-238	ENST00000531621	BRK1	Q8WUW1	75 aa		5.15	□□□□□ -1.59
EEF1D-238	ENST00000531621	KRTAP9-4	Q9BYQ2	154 aa		5.09	□□□□□ -1.59
EEF1D-238	ENST00000531621	KRTAP5-2	Q701N4	177 aa		5.06	□□□□□ -1.6
EEF1D-238	ENST00000531621	KRTAP4-11	Q9BYQ6	195 aa		5	□□□□□ -1.61
EEF1D-238	ENST00000531621	KRTAP6-2	Q3LI66	62 aa		4.98	□□□□□ -1.61
EEF1D-238	ENST00000531621	PMAIP1	Q13794	54 aa		4.86	□□□□□ -1.63
EEF1D-238	ENST00000531621	KRTAP5-8	O75690	187 aa		4.85	□□□□□ -1.63
EEF1D-238	ENST00000531621	MT3	P25713	68 aa		4.83	□□□□□ -1.64
EEF1D-238	ENST00000531621	OBSCN	Q5VST9	7968 aa		4.74	□□□□□ -1.65
EEF1D-238	ENST00000531621	AHNAK	Q09666	5890 aa	Known RBP	4.71	□□□□□ -1.65
EEF1D-238	ENST00000531621	MUC5AC	P98088	5654 aa		4.69	□□□□□ -1.66
EEF1D-238	ENST00000531621	MUC5B	Q9HC84	5762 aa	Predicted RBP	4.68	□□□□□ -1.66
EEF1D-238	ENST00000531621	PRAC1	Q96KF2	57 aa		4.64	□□□□□ -1.67
EEF1D-238	ENST00000531621	KRTAP9-9	Q9BYP9	154 aa		4.59	□□□□□ -1.67
EEF1D-238	ENST00000531621	KRTAP5-1	Q6L8H4	278 aa		4.56	□□□□□ -1.68
EEF1D-238	ENST00000531621	PRO0628	Q9UI54	55 aa		4.45	□□□□□ -1.7
EEF1D-238	ENST00000531621	LCE1E	Q5T753	118 aa		4.38	□□□□□ -1.71
EEF1D-238	ENST00000531621	KTN1-AS1	Q86SY8	53 aa		4.25	□□□□□ -1.73
EEF1D-238	ENST00000531621	LCE1B	Q5T7P3	118 aa		4.2	□□□□□ -1.74
EEF1D-238	ENST00000531621	KRTAP4-2	Q9BYR5	136 aa		4.12	□□□□□ -1.75
EEF1D-238	ENST00000531621	LCE1C	Q5T751	118 aa		4.06	□□□□□ -1.76
EEF1D-238	ENST00000531621	LCE3D	Q9BYE3	92 aa		4.05	□□□□□ -1.76
EEF1D-238	ENST00000531621	LUZP6	Q538Z0	58 aa		3.99	□□□□□ -1.77
EEF1D-238	ENST00000531621		H3BS24	57 aa		3.86	□□□□□ -1.79
EEF1D-238	ENST00000531621	LCE3E	Q5T5B0	92 aa		3.81	□□□□□ -1.8
EEF1D-238	ENST00000531621	KRTAP4-12	Q9BQ66	201 aa		3.78	□□□□□ -1.8
EEF1D-238	ENST00000531621	KRTAP5-6	Q6L8G9	129 aa	Predicted RBP	3.66	□□□□□ -1.82
EEF1D-238	ENST00000531621	KRTAP5-11	Q6L8G4	156 aa		3.64	□□□□□ -1.83
EEF1D-238	ENST00000531621	LCE1F	Q5T754	118 aa		3.56	□□□□□ -1.84
EEF1D-238	ENST00000531621		A0A0A0MQY5	61 aa		3.5	□□□□□ -1.85
EEF1D-238	ENST00000531621	KRTAP21-2	Q3LI59	83 aa		3.4	□□□□□ -1.87
EEF1D-238	ENST00000531621	PHGR1	C9JFL3	82 aa		3.24	□□□□□ -1.89
EEF1D-238	ENST00000531621	KRTAP4-4	Q9BYR3	166 aa		3.18	□□□□□ -1.9
EEF1D-238	ENST00000531621	NDUFAF8	A1L188	74 aa		3.17	□□□□□ -1.9
EEF1D-238	ENST00000531621	MUC19	Q7Z5P9	8384 aa		2.95	□□□□□ -1.94
EEF1D-238	ENST00000531621	PRM1	P04553	51 aa		2.9	□□□□□ -1.95
EEF1D-238	ENST00000531621	INE1	O15225	51 aa		2.71	□□□□□ -1.98
EEF1D-238	ENST00000531621	KRTAP21-1	Q3LI58	79 aa		2.43	□□□□□ -2.02
EEF1D-238	ENST00000531621	MUC16	Q8WXI7	14507 aa		2.06	□□□□□ -2.08

Retrieved 77 of 20,778 RNA–protein pairs in 11.8 ms