RNA–Protein interactions for RNA: ENST00000531043.1

HIF3A-214, Transcript of hypoxia inducible factor 3 subunit alpha, humanhuman

TSL 4

Gene HIF3A, Length 544 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HIF3A-214ENST00000531043 A0A1B0GU33 70 aa4.44□□□□□ -1.7
HIF3A-214ENST00000531043 SERP1Q9Y6X1 66 aa4.44□□□□□ -1.7
HIF3A-214ENST00000531043 SPRR5A0A1B0GTR4 108 aa4.42□□□□□ -1.7
HIF3A-214ENST00000531043 SEC61GP60059 68 aa4.41□□□□□ -1.7
HIF3A-214ENST00000531043 KRTAP5-5Q701N2 237 aaPredicted RBP4.4□□□□□ -1.71
HIF3A-214ENST00000531043 A8MU10 97 aa4.37□□□□□ -1.71
HIF3A-214ENST00000531043 TNP1P09430 55 aa4.36□□□□□ -1.71
HIF3A-214ENST00000531043 KRTAP12-3P60328 96 aa4.32□□□□□ -1.72
HIF3A-214ENST00000531043 KRTAP12-4P60329 112 aa4.31□□□□□ -1.72
HIF3A-214ENST00000531043 KRTAP9-9Q9BYP9 154 aa4.31□□□□□ -1.72
HIF3A-214ENST00000531043 KRTAP9-4Q9BYQ2 154 aa4.31□□□□□ -1.72
HIF3A-214ENST00000531043 SERP2Q8N6R1 65 aa4.3□□□□□ -1.72
HIF3A-214ENST00000531043 SMIM26A0A096LP01 95 aa4.27□□□□□ -1.73
HIF3A-214ENST00000531043 SYNE1Q8NF91 8797 aaKnown RBP4.26□□□□□ -1.73
HIF3A-214ENST00000531043 K7ERU9 68 aa4.24□□□□□ -1.73
HIF3A-214ENST00000531043 A0A1B0GU69 56 aa4.19□□□□□ -1.74
HIF3A-214ENST00000531043 KRTAP23-1A1A580 65 aa4.18□□□□□ -1.74
HIF3A-214ENST00000531043 KRTAP4-11Q9BYQ6 195 aa4.17□□□□□ -1.74
HIF3A-214ENST00000531043 H7BZZ5 65 aa4.13□□□□□ -1.75
HIF3A-214ENST00000531043 KRTAP5-2Q701N4 177 aa4.09□□□□□ -1.75
HIF3A-214ENST00000531043 COX7CP15954 63 aa4.06□□□□□ -1.76
HIF3A-214ENST00000531043 KRTAP5-8O75690 187 aa4.05□□□□□ -1.76
HIF3A-214ENST00000531043 AHNAKQ09666 5890 aaKnown RBP4.04□□□□□ -1.76
HIF3A-214ENST00000531043 KRTAP6-1Q3LI64 71 aa4.02□□□□□ -1.77
HIF3A-214ENST00000531043 MUC5BQ9HC84 5762 aaPredicted RBP4.02□□□□□ -1.77
HIF3A-214ENST00000531043 MUC5ACP98088 5654 aa4□□□□□ -1.77
HIF3A-214ENST00000531043 MT1AP04731 61 aa3.98□□□□□ -1.77
HIF3A-214ENST00000531043 LCE3CQ5T5A8 94 aa3.94□□□□□ -1.78
HIF3A-214ENST00000531043 KRTAP25-1Q3LHN0 102 aa3.93□□□□□ -1.78
HIF3A-214ENST00000531043 KRTAP15-1Q3LI76 137 aa3.92□□□□□ -1.78
HIF3A-214ENST00000531043 PRR15LQ9BU68 103 aa3.91□□□□□ -1.78
HIF3A-214ENST00000531043 KRTAP6-2Q3LI66 62 aa3.89□□□□□ -1.79
HIF3A-214ENST00000531043 LINC01558Q9Y6Z2 57 aa3.87□□□□□ -1.79
HIF3A-214ENST00000531043 OBSCNQ5VST9 7968 aa3.85□□□□□ -1.79
HIF3A-214ENST00000531043 KRTAP4-2Q9BYR5 136 aa3.84□□□□□ -1.79
HIF3A-214ENST00000531043 ANAPC13Q9BS18 74 aa3.82□□□□□ -1.8
HIF3A-214ENST00000531043 KRTAP9-6A8MVA2 160 aa3.81□□□□□ -1.8
HIF3A-214ENST00000531043 UQCR11O14957 56 aa3.8□□□□□ -1.8
HIF3A-214ENST00000531043 SVIPQ8NHG7 77 aa3.79□□□□□ -1.8
HIF3A-214ENST00000531043 CCDC179H3BU77 68 aa3.77□□□□□ -1.81
HIF3A-214ENST00000531043 KRTAP5-1Q6L8H4 278 aa3.74□□□□□ -1.81
HIF3A-214ENST00000531043 MIR22HGQ0VDD5 57 aa3.71□□□□□ -1.82
HIF3A-214ENST00000531043 ATP5EP56381 51 aaPredicted RBP3.67□□□□□ -1.82
HIF3A-214ENST00000531043 PCP4P48539 62 aa3.64□□□□□ -1.83
HIF3A-214ENST00000531043 K7ERS5 55 aa3.63□□□□□ -1.83
HIF3A-214ENST00000531043 MT3P25713 68 aa3.62□□□□□ -1.83
HIF3A-214ENST00000531043 TMEM258P61165 79 aa3.59□□□□□ -1.83
HIF3A-214ENST00000531043 A0A0A0MQY5 61 aa3.51□□□□□ -1.85
HIF3A-214ENST00000531043 PSPHP1O15172 72 aa3.49□□□□□ -1.85
HIF3A-214ENST00000531043 RPS28P62857 69 aaKnown RBP3.46□□□□□ -1.86
HIF3A-214ENST00000531043 Q1T7F1 81 aa3.44□□□□□ -1.86
HIF3A-214ENST00000531043 CDC42SE1Q9NRR8 79 aa3.43□□□□□ -1.86
HIF3A-214ENST00000531043 LCE1EQ5T753 118 aa3.39□□□□□ -1.87
HIF3A-214ENST00000531043 V9GYY9 64 aa3.39□□□□□ -1.87
HIF3A-214ENST00000531043 ROMO1P60602 79 aa3.38□□□□□ -1.87
HIF3A-214ENST00000531043 A6NED7 52 aa3.3□□□□□ -1.88
HIF3A-214ENST00000531043 LCE1BQ5T7P3 118 aa3.28□□□□□ -1.88
HIF3A-214ENST00000531043 LCE1CQ5T751 118 aa3.16□□□□□ -1.9
HIF3A-214ENST00000531043 PRAC1Q96KF2 57 aa2.94□□□□□ -1.94
HIF3A-214ENST00000531043 KRTAP5-11Q6L8G4 156 aa2.93□□□□□ -1.94
HIF3A-214ENST00000531043 PRO0628Q9UI54 55 aa2.87□□□□□ -1.95
HIF3A-214ENST00000531043 LCE1FQ5T754 118 aa2.85□□□□□ -1.95
HIF3A-214ENST00000531043 NDUFAF8A1L188 74 aa2.84□□□□□ -1.95
HIF3A-214ENST00000531043 KRTAP5-6Q6L8G9 129 aaPredicted RBP2.84□□□□□ -1.95
HIF3A-214ENST00000531043 BRK1Q8WUW1 75 aa2.82□□□□□ -1.96
HIF3A-214ENST00000531043 PHGR1C9JFL3 82 aa2.79□□□□□ -1.96
HIF3A-214ENST00000531043 LCE3DQ9BYE3 92 aa2.75□□□□□ -1.97
HIF3A-214ENST00000531043 PMAIP1Q13794 54 aa2.69□□□□□ -1.98
HIF3A-214ENST00000531043 KRTAP21-2Q3LI59 83 aa2.64□□□□□ -1.99
HIF3A-214ENST00000531043 KTN1-AS1Q86SY8 53 aa2.61□□□□□ -1.99
HIF3A-214ENST00000531043 LCE3EQ5T5B0 92 aa2.54□□□□□ -2
HIF3A-214ENST00000531043 KRTAP4-4Q9BYR3 166 aa2.53□□□□□ -2
HIF3A-214ENST00000531043 MUC19Q7Z5P9 8384 aa2.39□□□□□ -2.03
HIF3A-214ENST00000531043 LUZP6Q538Z0 58 aa2.15□□□□□ -2.07
HIF3A-214ENST00000531043 KRTAP21-1Q3LI58 79 aa2.09□□□□□ -2.07
HIF3A-214ENST00000531043 INE1O15225 51 aa1.83□□□□□ -2.12
HIF3A-214ENST00000531043 PRM1P04553 51 aa1.75□□□□□ -2.13
HIF3A-214ENST00000531043 MUC16Q8WXI7 14507 aa1.68□□□□□ -2.14
Retrieved 78 of 20,778 RNA–protein pairs in 63.5 ms