RNA–Protein interactions for RNA: ENST00000530820.5

CAPRIN1-209, Transcript of cell cycle associated protein 1, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene CAPRIN1, Length 3,454 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CAPRIN1-209ENST00000530820 MT1FP04733 61 aa2.93□□□□□ -1.94
CAPRIN1-209ENST00000530820 SPRR2GQ9BYE4 73 aa2.93□□□□□ -1.94
CAPRIN1-209ENST00000530820 KRTAP6-3Q3LI67 103 aa2.92□□□□□ -1.94
CAPRIN1-209ENST00000530820 LCE1DQ5T752 114 aa2.91□□□□□ -1.94
CAPRIN1-209ENST00000530820 LCE3BQ5TA77 95 aa2.9□□□□□ -1.95
CAPRIN1-209ENST00000530820 KRTAP4-3Q9BYR4 195 aa2.9□□□□□ -1.95
CAPRIN1-209ENST00000530820 MT1HP80294 61 aa2.89□□□□□ -1.95
CAPRIN1-209ENST00000530820 MT1GP13640 62 aa2.85□□□□□ -1.95
CAPRIN1-209ENST00000530820 MUC12Q9UKN1 5478 aa2.84□□□□□ -1.95
CAPRIN1-209ENST00000530820 SYNE2Q8WXH0 6885 aaKnown RBP2.83□□□□□ -1.96
CAPRIN1-209ENST00000530820 MT2AP02795 61 aa2.82□□□□□ -1.96
CAPRIN1-209ENST00000530820 MT1BP07438 61 aa2.82□□□□□ -1.96
CAPRIN1-209ENST00000530820 SSPOA2VEC9 5147 aa2.82□□□□□ -1.96
CAPRIN1-209ENST00000530820 KRTAP9-6A0A140TA67 174 aa2.81□□□□□ -1.96
CAPRIN1-209ENST00000530820 KRTAP2-2Q9BYT5 123 aa2.81□□□□□ -1.96
CAPRIN1-209ENST00000530820 KRTAP9-8Q9BYQ0 159 aa2.78□□□□□ -1.96
CAPRIN1-209ENST00000530820 KRTAP9-2Q9BYQ4 174 aa2.76□□□□□ -1.97
CAPRIN1-209ENST00000530820 LCE1FQ5T754 118 aa2.72□□□□□ -1.97
CAPRIN1-209ENST00000530820 LCE4AQ5TA78 99 aa2.67□□□□□ -1.98
CAPRIN1-209ENST00000530820 LCE3EQ5T5B0 92 aa2.66□□□□□ -1.98
CAPRIN1-209ENST00000530820 MDN1Q9NU22 5596 aa2.64□□□□□ -1.99
CAPRIN1-209ENST00000530820 LCE3DQ9BYE3 92 aa2.62□□□□□ -1.99
CAPRIN1-209ENST00000530820 KRTAP9-3Q9BYQ3 159 aa2.62□□□□□ -1.99
CAPRIN1-209ENST00000530820 KRTAP19-7Q3SYF9 63 aa2.62□□□□□ -1.99
CAPRIN1-209ENST00000530820 KRTAP19-8Q3LI54 63 aa2.61□□□□□ -1.99
CAPRIN1-209ENST00000530820 MT1LQ93083 61 aa2.59□□□□□ -1.99
CAPRIN1-209ENST00000530820 KRTAP5-5Q701N2 237 aaPredicted RBP2.57□□□□□ -2
CAPRIN1-209ENST00000530820 KRTAP6-2Q3LI66 62 aa2.57□□□□□ -2
CAPRIN1-209ENST00000530820 KRTAP19-4Q3LI73 84 aa2.57□□□□□ -2
CAPRIN1-209ENST00000530820 KRTAP4-6Q9BYQ5 205 aa2.5□□□□□ -2.01
CAPRIN1-209ENST00000530820 MACF1Q9UPN3 7388 aaKnown RBP2.49□□□□□ -2.01
CAPRIN1-209ENST00000530820 MT1EP04732 61 aa2.47□□□□□ -2.01
CAPRIN1-209ENST00000530820 KRTAP9-4Q9BYQ2 154 aa2.43□□□□□ -2.02
CAPRIN1-209ENST00000530820 KRTAP9-1A8MXZ3 250 aaPredicted RBP2.42□□□□□ -2.02
CAPRIN1-209ENST00000530820 LCE5AQ5TCM9 118 aa2.38□□□□□ -2.03
CAPRIN1-209ENST00000530820 KRTAP6-1Q3LI64 71 aa2.37□□□□□ -2.03
CAPRIN1-209ENST00000530820 KRTAP9-9Q9BYP9 154 aa2.37□□□□□ -2.03
CAPRIN1-209ENST00000530820 KRTAP4-12Q9BQ66 201 aa2.36□□□□□ -2.03
CAPRIN1-209ENST00000530820 SPRR2FQ96RM1 72 aa2.35□□□□□ -2.03
CAPRIN1-209ENST00000530820 KRTAP19-6Q3LI70 58 aa2.32□□□□□ -2.04
CAPRIN1-209ENST00000530820 KRTAP4-11Q9BYQ6 195 aa2.32□□□□□ -2.04
CAPRIN1-209ENST00000530820 MT1MQ8N339 61 aa2.31□□□□□ -2.04
CAPRIN1-209ENST00000530820 KRTAP5-3Q6L8H2 238 aa2.22□□□□□ -2.05
CAPRIN1-209ENST00000530820 KRTAP19-3Q7Z4W3 81 aa2.19□□□□□ -2.06
CAPRIN1-209ENST00000530820 SPRR2EP22531 72 aa2.19□□□□□ -2.06
CAPRIN1-209ENST00000530820 SPRR2BP35325 72 aa2.19□□□□□ -2.06
CAPRIN1-209ENST00000530820 SPRR2AP35326 72 aa2.19□□□□□ -2.06
CAPRIN1-209ENST00000530820 MT1AP04731 61 aa2.18□□□□□ -2.06
CAPRIN1-209ENST00000530820 NEBP20929 6669 aa2.11□□□□□ -2.07
CAPRIN1-209ENST00000530820 HMCN1Q96RW7 5635 aa2.09□□□□□ -2.07
CAPRIN1-209ENST00000530820 SPRR2DP22532 72 aa2.08□□□□□ -2.08
CAPRIN1-209ENST00000530820 GPR98Q8WXG9 6306 aa2.07□□□□□ -2.08
CAPRIN1-209ENST00000530820 LCE1CQ5T751 118 aa2.04□□□□□ -2.08
CAPRIN1-209ENST00000530820 LCE1BQ5T7P3 118 aa2.04□□□□□ -2.08
CAPRIN1-209ENST00000530820 MUC5BQ9HC84 5762 aaPredicted RBP2.02□□□□□ -2.09
CAPRIN1-209ENST00000530820 KRTAP20-1Q3LI63 56 aa2□□□□□ -2.09
CAPRIN1-209ENST00000530820 KRTAP5-9P26371 169 aa1.97□□□□□ -2.09
CAPRIN1-209ENST00000530820 MT4P47944 62 aa1.96□□□□□ -2.1
CAPRIN1-209ENST00000530820 KRTAP4-2Q9BYR5 136 aa1.94□□□□□ -2.1
CAPRIN1-209ENST00000530820 MT3P25713 68 aa1.94□□□□□ -2.1
CAPRIN1-209ENST00000530820 MUC5ACP98088 5654 aa1.9□□□□□ -2.1
CAPRIN1-209ENST00000530820 KRTAP5-2Q701N4 177 aa1.9□□□□□ -2.11
CAPRIN1-209ENST00000530820 KRTAP4-4Q9BYR3 166 aa1.86□□□□□ -2.11
CAPRIN1-209ENST00000530820 AHNAK2Q8IVF2 5795 aa1.75□□□□□ -2.13
CAPRIN1-209ENST00000530820 KRTAP5-6Q6L8G9 129 aaPredicted RBP1.68□□□□□ -2.14
CAPRIN1-209ENST00000530820 KRTAP5-10Q6L8G5 202 aa1.66□□□□□ -2.14
CAPRIN1-209ENST00000530820 KRTAP20-2Q3LI61 65 aa1.65□□□□□ -2.14
CAPRIN1-209ENST00000530820 KRTAP5-4Q6L8H1 288 aa1.6□□□□□ -2.15
CAPRIN1-209ENST00000530820 KRTAP21-1Q3LI58 79 aa1.55□□□□□ -2.16
CAPRIN1-209ENST00000530820 AHNAKQ09666 5890 aaKnown RBP1.52□□□□□ -2.17
CAPRIN1-209ENST00000530820 KRTAP5-8O75690 187 aa1.51□□□□□ -2.17
CAPRIN1-209ENST00000530820 KRTAP5-7Q6L8G8 165 aa1.49□□□□□ -2.17
CAPRIN1-209ENST00000530820 KRTAP5-11Q6L8G4 156 aa1.4□□□□□ -2.19
CAPRIN1-209ENST00000530820 KRTAP5-1Q6L8H4 278 aa1.35□□□□□ -2.19
CAPRIN1-209ENST00000530820 KRTAP21-2Q3LI59 83 aa1.31□□□□□ -2.2
CAPRIN1-209ENST00000530820 PHGR1C9JFL3 82 aa1.06□□□□□ -2.24
CAPRIN1-209ENST00000530820 MUC16Q8WXI7 14507 aa0.93□□□□□ -2.26
Retrieved 77 of 20,778 RNA–protein pairs in 52.2 ms