RNA–Protein interactions for RNA: ENST00000530422.1

SCARNA9-201, small Cajal body-specific RNA 9, humanhuman

BASIC

Gene SCARNA9, Length 353 nt, Biotype antisense RNA, Subcellular localisation Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCARNA9-201ENST00000530422 KRTAP12-4P60329 112 aa3.08□□□□□ -1.92
SCARNA9-201ENST00000530422 LCE3DQ9BYE3 92 aa3.08□□□□□ -1.92
SCARNA9-201ENST00000530422 TNXBP22105 4242 aa3.07□□□□□ -1.92
SCARNA9-201ENST00000530422 LRP2P98164 4655 aa3.07□□□□□ -1.92
SCARNA9-201ENST00000530422 KRTAP10-4P60372 401 aaPredicted RBP3.04□□□□□ -1.92
SCARNA9-201ENST00000530422 MT1HL1P0DM35 61 aa3□□□□□ -1.93
SCARNA9-201ENST00000530422 C9orf92A6NGG3 77 aa2.96□□□□□ -1.94
SCARNA9-201ENST00000530422 FAT4Q6V0I7 4981 aa2.93□□□□□ -1.94
SCARNA9-201ENST00000530422 MUC2Q02817 5179 aa2.91□□□□□ -1.94
SCARNA9-201ENST00000530422 LPAP08519 4548 aa2.91□□□□□ -1.94
SCARNA9-201ENST00000530422 LCE1CQ5T751 118 aa2.89□□□□□ -1.95
SCARNA9-201ENST00000530422 LCE1BQ5T7P3 118 aa2.89□□□□□ -1.95
SCARNA9-201ENST00000530422 TNP1P09430 55 aa2.8□□□□□ -1.96
SCARNA9-201ENST00000530422 MUC17Q685J3 4493 aa2.79□□□□□ -1.96
SCARNA9-201ENST00000530422 FSIP2Q5CZC0 6907 aa2.77□□□□□ -1.97
SCARNA9-201ENST00000530422 KRTAP12-3P60328 96 aa2.74□□□□□ -1.97
SCARNA9-201ENST00000530422 CRCT1Q9UGL9 99 aa2.74□□□□□ -1.97
SCARNA9-201ENST00000530422 KRTAP5-8O75690 187 aa2.63□□□□□ -1.99
SCARNA9-201ENST00000530422 M0R2T5 61 aa2.62□□□□□ -1.99
SCARNA9-201ENST00000530422 MT1HP80294 61 aa2.58□□□□□ -2
SCARNA9-201ENST00000530422 KRTAP4-1Q9BYQ7 146 aa2.58□□□□□ -2
SCARNA9-201ENST00000530422 KRTAP2-3P0C7H8 128 aa2.55□□□□□ -2
SCARNA9-201ENST00000530422 KRTAP2-4Q9BYR9 128 aa2.55□□□□□ -2
SCARNA9-201ENST00000530422 KRTAP2-1Q9BYU5 128 aa2.55□□□□□ -2
SCARNA9-201ENST00000530422 KRTAP19-2Q3LHN2 52 aa2.54□□□□□ -2
SCARNA9-201ENST00000530422 FLGP20930 4061 aaPredicted RBP2.52□□□□□ -2.01
SCARNA9-201ENST00000530422 SSPOA2VEC9 5147 aa2.51□□□□□ -2.01
SCARNA9-201ENST00000530422 USH2AO75445 5202 aa2.51□□□□□ -2.01
SCARNA9-201ENST00000530422 KRTAP8-1Q8IUC2 63 aa2.5□□□□□ -2.01
SCARNA9-201ENST00000530422 SYNE2Q8WXH0 6885 aaKnown RBP2.46□□□□□ -2.02
SCARNA9-201ENST00000530422 FCGBPQ9Y6R7 5405 aaPredicted RBP2.45□□□□□ -2.02
SCARNA9-201ENST00000530422 MACF1Q9UPN3 7388 aaKnown RBP2.44□□□□□ -2.02
SCARNA9-201ENST00000530422 KRTAP5-7Q6L8G8 165 aa2.42□□□□□ -2.02
SCARNA9-201ENST00000530422 MUC19Q7Z5P9 8384 aa2.41□□□□□ -2.02
SCARNA9-201ENST00000530422 SPRR2GQ9BYE4 73 aa2.36□□□□□ -2.03
SCARNA9-201ENST00000530422 MT2AP02795 61 aa2.35□□□□□ -2.03
SCARNA9-201ENST00000530422 NEBP20929 6669 aa2.34□□□□□ -2.03
SCARNA9-201ENST00000530422 MT1FP04733 61 aa2.33□□□□□ -2.04
SCARNA9-201ENST00000530422 KRTAP19-6Q3LI70 58 aa2.33□□□□□ -2.04
SCARNA9-201ENST00000530422 MUC12Q9UKN1 5478 aa2.29□□□□□ -2.04
SCARNA9-201ENST00000530422 KRTAP20-1Q3LI63 56 aa2.26□□□□□ -2.05
SCARNA9-201ENST00000530422 PRM1P04553 51 aa2.22□□□□□ -2.05
SCARNA9-201ENST00000530422 KRTAP19-8Q3LI54 63 aa2.2□□□□□ -2.06
SCARNA9-201ENST00000530422 MDN1Q9NU22 5596 aa2.17□□□□□ -2.06
SCARNA9-201ENST00000530422 GPR98Q8WXG9 6306 aa2.17□□□□□ -2.06
SCARNA9-201ENST00000530422 KMT2DO14686 5537 aa2.16□□□□□ -2.06
SCARNA9-201ENST00000530422 MT1XP80297 61 aa2.12□□□□□ -2.07
SCARNA9-201ENST00000530422 KRTAP21-2Q3LI59 83 aa2.11□□□□□ -2.07
SCARNA9-201ENST00000530422 KRTAP19-5Q3LI72 72 aa2.1□□□□□ -2.07
SCARNA9-201ENST00000530422 MT1BP07438 61 aa2.08□□□□□ -2.08
SCARNA9-201ENST00000530422 SPRR2EP22531 72 aa2.06□□□□□ -2.08
SCARNA9-201ENST00000530422 SPRR2BP35325 72 aa2.06□□□□□ -2.08
SCARNA9-201ENST00000530422 SPRR2AP35326 72 aa2.06□□□□□ -2.08
SCARNA9-201ENST00000530422 SPRR2FQ96RM1 72 aa2.04□□□□□ -2.08
SCARNA9-201ENST00000530422 SPRR2DP22532 72 aa2□□□□□ -2.09
SCARNA9-201ENST00000530422 MT1EP04732 61 aa1.97□□□□□ -2.09
SCARNA9-201ENST00000530422 KRTAP19-3Q7Z4W3 81 aa1.97□□□□□ -2.09
SCARNA9-201ENST00000530422 MT1AP04731 61 aa1.94□□□□□ -2.1
SCARNA9-201ENST00000530422 MT1LQ93083 61 aa1.94□□□□□ -2.1
SCARNA9-201ENST00000530422 DSTQ03001 7570 aaKnown RBP1.89□□□□□ -2.11
SCARNA9-201ENST00000530422 KRTAP19-7Q3SYF9 63 aa1.87□□□□□ -2.11
SCARNA9-201ENST00000530422 HMCN1Q96RW7 5635 aa1.81□□□□□ -2.12
SCARNA9-201ENST00000530422 AHNAK2Q8IVF2 5795 aa1.8□□□□□ -2.12
SCARNA9-201ENST00000530422 KRTAP6-2Q3LI66 62 aa1.76□□□□□ -2.13
SCARNA9-201ENST00000530422 KRTAP5-10Q6L8G5 202 aa1.76□□□□□ -2.13
SCARNA9-201ENST00000530422 MT1GP13640 62 aa1.74□□□□□ -2.13
SCARNA9-201ENST00000530422 MT4P47944 62 aa1.74□□□□□ -2.13
SCARNA9-201ENST00000530422 SYNE1Q8NF91 8797 aaKnown RBP1.73□□□□□ -2.13
SCARNA9-201ENST00000530422 KRTAP21-1Q3LI58 79 aa1.69□□□□□ -2.14
SCARNA9-201ENST00000530422 MT1MQ8N339 61 aa1.69□□□□□ -2.14
SCARNA9-201ENST00000530422 AHNAKQ09666 5890 aaKnown RBP1.65□□□□□ -2.15
SCARNA9-201ENST00000530422 KRTAP20-2Q3LI61 65 aa1.6□□□□□ -2.15
SCARNA9-201ENST00000530422 KRTAP6-1Q3LI64 71 aa1.55□□□□□ -2.16
SCARNA9-201ENST00000530422 MUC5BQ9HC84 5762 aaPredicted RBP1.55□□□□□ -2.16
SCARNA9-201ENST00000530422 MUC5ACP98088 5654 aa1.54□□□□□ -2.16
SCARNA9-201ENST00000530422 PHGR1C9JFL3 82 aa1.04□□□□□ -2.24
SCARNA9-201ENST00000530422 MUC16Q8WXI7 14507 aa1.01□□□□□ -2.25
Retrieved 77 of 20,778 RNA–protein pairs in 12.2 ms