RNA–Protein interactions for RNA: ENST00000530384.5

CCS-205, Transcript of copper chaperone for superoxide dismutase, humanhuman

TSL 5

Gene CCS, Length 1,196 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCS-205ENST00000530384 MT1GP13640 62 aa6.16□□□□□ -1.42
CCS-205ENST00000530384 PRO0628Q9UI54 55 aa6.16□□□□□ -1.42
CCS-205ENST00000530384 PP632Q6XCG6 107 aa6.13□□□□□ -1.43
CCS-205ENST00000530384 PSPHP1O15172 72 aa6.11□□□□□ -1.43
CCS-205ENST00000530384 K7ERS5 55 aa6.09□□□□□ -1.43
CCS-205ENST00000530384 MT1LQ93083 61 aa6.09□□□□□ -1.43
CCS-205ENST00000530384 DSTQ03001 7570 aaKnown RBP6.04□□□□□ -1.44
CCS-205ENST00000530384 MT1MQ8N339 61 aa6.03□□□□□ -1.44
CCS-205ENST00000530384 KRTAP25-1Q3LHN0 102 aa6□□□□□ -1.45
CCS-205ENST00000530384 KRTAP12-3P60328 96 aa5.97□□□□□ -1.45
CCS-205ENST00000530384 KRTAP4-9Q9BYQ8 210 aa5.97□□□□□ -1.45
CCS-205ENST00000530384 A6NED7 52 aa5.93□□□□□ -1.46
CCS-205ENST00000530384 BRK1Q8WUW1 75 aa5.93□□□□□ -1.46
CCS-205ENST00000530384 KRTAP4-3Q9BYR4 195 aa5.85□□□□□ -1.47
CCS-205ENST00000530384 GPR98Q8WXG9 6306 aa5.82□□□□□ -1.48
CCS-205ENST00000530384 LCE4AQ5TA78 99 aa5.8□□□□□ -1.48
CCS-205ENST00000530384 KRTAP23-1A1A580 65 aa5.79□□□□□ -1.48
CCS-205ENST00000530384 LCE1DQ5T752 114 aa5.79□□□□□ -1.48
CCS-205ENST00000530384 CDC42SE1Q9NRR8 79 aa5.78□□□□□ -1.48
CCS-205ENST00000530384 PMAIP1Q13794 54 aa5.76□□□□□ -1.49
CCS-205ENST00000530384 KRTAP4-7Q9BYR0 210 aa5.76□□□□□ -1.49
CCS-205ENST00000530384 MT4P47944 62 aa5.72□□□□□ -1.49
CCS-205ENST00000530384 KRTAP19-4Q3LI73 84 aa5.7□□□□□ -1.5
CCS-205ENST00000530384 KRTAP5-4Q6L8H1 288 aa5.69□□□□□ -1.5
CCS-205ENST00000530384 ROMO1P60602 79 aa5.66□□□□□ -1.5
CCS-205ENST00000530384 HMCN1Q96RW7 5635 aa5.65□□□□□ -1.51
CCS-205ENST00000530384 KTN1-AS1Q86SY8 53 aa5.63□□□□□ -1.51
CCS-205ENST00000530384 KRTAP15-1Q3LI76 137 aa5.62□□□□□ -1.51
CCS-205ENST00000530384 KRTAP4-6Q9BYQ5 205 aa5.56□□□□□ -1.52
CCS-205ENST00000530384 KRTAP5-5Q701N2 237 aaPredicted RBP5.52□□□□□ -1.53
CCS-205ENST00000530384 AHNAK2Q8IVF2 5795 aa5.51□□□□□ -1.53
CCS-205ENST00000530384 LCE3CQ5T5A8 94 aa5.51□□□□□ -1.53
CCS-205ENST00000530384 LOC100996750A0A140TA64 210 aa5.45□□□□□ -1.54
CCS-205ENST00000530384 KRTAP5-10Q6L8G5 202 aa5.43□□□□□ -1.54
CCS-205ENST00000530384 KRTAP12-4P60329 112 aa5.38□□□□□ -1.55
CCS-205ENST00000530384 SPRR5A0A1B0GTR4 108 aa5.37□□□□□ -1.55
CCS-205ENST00000530384 KRTAP20-2Q3LI61 65 aa5.36□□□□□ -1.55
CCS-205ENST00000530384 KRTAP5-3Q6L8H2 238 aa5.27□□□□□ -1.57
CCS-205ENST00000530384 SYNE1Q8NF91 8797 aaKnown RBP5.23□□□□□ -1.57
CCS-205ENST00000530384 KRTAP5-7Q6L8G8 165 aa5.2□□□□□ -1.58
CCS-205ENST00000530384 MT1AP04731 61 aa5.19□□□□□ -1.58
CCS-205ENST00000530384 KRTAP9-6A8MVA2 160 aa5.15□□□□□ -1.59
CCS-205ENST00000530384 KRTAP6-1Q3LI64 71 aa5.13□□□□□ -1.59
CCS-205ENST00000530384 PRAC1Q96KF2 57 aa5.11□□□□□ -1.59
CCS-205ENST00000530384 KRTAP5-2Q701N4 177 aa5□□□□□ -1.61
CCS-205ENST00000530384 KRTAP9-4Q9BYQ2 154 aa5□□□□□ -1.61
CCS-205ENST00000530384 KRTAP6-2Q3LI66 62 aa4.88□□□□□ -1.63
CCS-205ENST00000530384 KRTAP4-11Q9BYQ6 195 aa4.87□□□□□ -1.63
CCS-205ENST00000530384 H3BS24 57 aa4.79□□□□□ -1.64
CCS-205ENST00000530384 MT3P25713 68 aa4.75□□□□□ -1.65
CCS-205ENST00000530384 KRTAP5-8O75690 187 aa4.72□□□□□ -1.65
CCS-205ENST00000530384 OBSCNQ5VST9 7968 aa4.59□□□□□ -1.67
CCS-205ENST00000530384 MUC5BQ9HC84 5762 aaPredicted RBP4.52□□□□□ -1.69
CCS-205ENST00000530384 MUC5ACP98088 5654 aa4.51□□□□□ -1.69
CCS-205ENST00000530384 AHNAKQ09666 5890 aaKnown RBP4.51□□□□□ -1.69
CCS-205ENST00000530384 KRTAP5-1Q6L8H4 278 aa4.46□□□□□ -1.7
CCS-205ENST00000530384 KRTAP9-9Q9BYP9 154 aa4.46□□□□□ -1.7
CCS-205ENST00000530384 NDUFAF8A1L188 74 aa4.4□□□□□ -1.71
CCS-205ENST00000530384 LCE1EQ5T753 118 aa4.34□□□□□ -1.71
CCS-205ENST00000530384 A0A0A0MQY5 61 aa4.33□□□□□ -1.72
CCS-205ENST00000530384 LUZP6Q538Z0 58 aa4.25□□□□□ -1.73
CCS-205ENST00000530384 LCE1BQ5T7P3 118 aa4.06□□□□□ -1.76
CCS-205ENST00000530384 KRTAP4-2Q9BYR5 136 aa4.06□□□□□ -1.76
CCS-205ENST00000530384 LCE1CQ5T751 118 aa4.02□□□□□ -1.77
CCS-205ENST00000530384 LCE3DQ9BYE3 92 aa4□□□□□ -1.77
CCS-205ENST00000530384 INE1O15225 51 aa3.82□□□□□ -1.8
CCS-205ENST00000530384 LCE3EQ5T5B0 92 aa3.79□□□□□ -1.8
CCS-205ENST00000530384 KRTAP4-12Q9BQ66 201 aa3.7□□□□□ -1.82
CCS-205ENST00000530384 KRTAP5-6Q6L8G9 129 aaPredicted RBP3.67□□□□□ -1.82
CCS-205ENST00000530384 KRTAP5-11Q6L8G4 156 aa3.64□□□□□ -1.83
CCS-205ENST00000530384 LCE1FQ5T754 118 aa3.52□□□□□ -1.85
CCS-205ENST00000530384 KRTAP21-2Q3LI59 83 aa3.38□□□□□ -1.87
CCS-205ENST00000530384 PHGR1C9JFL3 82 aa3.16□□□□□ -1.9
CCS-205ENST00000530384 KRTAP4-4Q9BYR3 166 aa3.06□□□□□ -1.92
CCS-205ENST00000530384 PRM1P04553 51 aa2.88□□□□□ -1.95
CCS-205ENST00000530384 MUC19Q7Z5P9 8384 aa2.82□□□□□ -1.96
CCS-205ENST00000530384 KRTAP21-1Q3LI58 79 aa2.35□□□□□ -2.03
CCS-205ENST00000530384 MUC16Q8WXI7 14507 aa2.01□□□□□ -2.09
Retrieved 78 of 20,778 RNA–protein pairs in 12.9 ms